Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4193 and Psest_4194 are separated by 66 nucleotides Psest_4194 and Psest_4195 are separated by 2 nucleotides Psest_4195 and Psest_4196 are separated by 3 nucleotides Psest_4196 and Psest_4197 overlap by 4 nucleotides
Psest_4193: Psest_4193 - Predicted signal transduction protein, at 4,371,816 to 4,373,219
_4193
Psest_4194: Psest_4194 - Type II secretory pathway, component PulM, at 4,373,286 to 4,373,798
_4194
Psest_4195: Psest_4195 - general secretion pathway protein L, at 4,373,801 to 4,374,934
_4195
Psest_4196: Psest_4196 - Type II secretory pathway, component PulK, at 4,374,938 to 4,375,927
_4196
Psest_4197: Psest_4197 - general secretion pathway protein J, at 4,375,924 to 4,376,637
_4197
Position (kb)
4373
4374
4375 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4372.801 kb on - strand, within Psest_4193 at 4372.801 kb on - strand, within Psest_4193 at 4372.801 kb on - strand, within Psest_4193 at 4373.001 kb on + strand, within Psest_4193 at 4373.123 kb on + strand at 4373.124 kb on - strand at 4373.124 kb on - strand at 4373.126 kb on + strand at 4373.127 kb on - strand at 4373.182 kb on + strand at 4373.182 kb on + strand at 4373.410 kb on + strand, within Psest_4194 at 4373.410 kb on + strand, within Psest_4194 at 4373.410 kb on + strand, within Psest_4194 at 4373.411 kb on - strand, within Psest_4194 at 4373.411 kb on - strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.614 kb on + strand, within Psest_4194 at 4373.618 kb on - strand, within Psest_4194 at 4373.668 kb on + strand, within Psest_4194 at 4373.668 kb on + strand, within Psest_4194 at 4373.668 kb on + strand, within Psest_4194 at 4373.669 kb on - strand, within Psest_4194 at 4373.669 kb on - strand, within Psest_4194 at 4373.930 kb on + strand, within Psest_4195 at 4373.930 kb on + strand, within Psest_4195 at 4373.931 kb on - strand, within Psest_4195 at 4373.964 kb on + strand, within Psest_4195 at 4373.964 kb on + strand, within Psest_4195 at 4373.965 kb on - strand, within Psest_4195 at 4373.965 kb on - strand, within Psest_4195 at 4373.965 kb on - strand, within Psest_4195 at 4374.178 kb on - strand, within Psest_4195 at 4374.178 kb on - strand, within Psest_4195 at 4374.178 kb on - strand, within Psest_4195 at 4374.329 kb on + strand, within Psest_4195 at 4374.330 kb on - strand, within Psest_4195 at 4374.330 kb on - strand, within Psest_4195 at 4374.330 kb on - strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.513 kb on - strand, within Psest_4195 at 4374.873 kb on + strand at 4374.939 kb on + strand at 4374.939 kb on + strand at 4374.939 kb on + strand at 4374.939 kb on + strand at 4374.939 kb on + strand at 4375.126 kb on + strand, within Psest_4196 at 4375.305 kb on + strand, within Psest_4196 at 4375.306 kb on - strand, within Psest_4196 at 4375.549 kb on + strand, within Psest_4196 at 4375.549 kb on + strand, within Psest_4196
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 4,372,801 - Psest_4193 0.70 -2.1 4,372,801 - Psest_4193 0.70 -1.0 4,372,801 - Psest_4193 0.70 +0.8 4,373,001 + Psest_4193 0.84 -1.6 4,373,123 + +1.8 4,373,124 - +1.0 4,373,124 - +0.4 4,373,126 + +1.2 4,373,127 - -0.0 4,373,182 + -2.4 4,373,182 + -0.4 4,373,410 + Psest_4194 0.24 -1.7 4,373,410 + Psest_4194 0.24 -4.0 4,373,410 + Psest_4194 0.24 +0.7 4,373,411 - Psest_4194 0.24 -2.5 4,373,411 - Psest_4194 0.24 +0.3 4,373,587 + Psest_4194 0.59 -0.7 4,373,587 + Psest_4194 0.59 +0.6 4,373,587 + Psest_4194 0.59 +1.5 4,373,587 + Psest_4194 0.59 -2.5 4,373,587 + Psest_4194 0.59 -1.2 4,373,587 + Psest_4194 0.59 +0.9 4,373,587 + Psest_4194 0.59 +0.5 4,373,587 + Psest_4194 0.59 -0.1 4,373,587 + Psest_4194 0.59 -2.0 4,373,588 - Psest_4194 0.59 +0.7 4,373,588 - Psest_4194 0.59 -0.4 4,373,588 - Psest_4194 0.59 -2.7 4,373,588 - Psest_4194 0.59 -1.7 4,373,588 - Psest_4194 0.59 -0.8 4,373,588 - Psest_4194 0.59 -2.2 4,373,588 - Psest_4194 0.59 -1.2 4,373,588 - Psest_4194 0.59 -1.4 4,373,614 + Psest_4194 0.64 -2.8 4,373,618 - Psest_4194 0.65 +2.1 4,373,668 + Psest_4194 0.74 +1.0 4,373,668 + Psest_4194 0.74 -0.6 4,373,668 + Psest_4194 0.74 -0.9 4,373,669 - Psest_4194 0.75 +1.7 4,373,669 - Psest_4194 0.75 +0.3 4,373,930 + Psest_4195 0.11 +0.8 4,373,930 + Psest_4195 0.11 -0.0 4,373,931 - Psest_4195 0.11 +0.1 4,373,964 + Psest_4195 0.14 -2.5 4,373,964 + Psest_4195 0.14 -0.3 4,373,965 - Psest_4195 0.14 +0.1 4,373,965 - Psest_4195 0.14 -0.4 4,373,965 - Psest_4195 0.14 +0.1 4,374,178 - Psest_4195 0.33 -0.5 4,374,178 - Psest_4195 0.33 -1.9 4,374,178 - Psest_4195 0.33 -2.1 4,374,329 + Psest_4195 0.47 -0.3 4,374,330 - Psest_4195 0.47 -1.2 4,374,330 - Psest_4195 0.47 -0.8 4,374,330 - Psest_4195 0.47 -1.7 4,374,512 + Psest_4195 0.63 -1.8 4,374,512 + Psest_4195 0.63 +1.3 4,374,512 + Psest_4195 0.63 -1.4 4,374,512 + Psest_4195 0.63 +1.1 4,374,513 - Psest_4195 0.63 -1.8 4,374,873 + -0.2 4,374,939 + -0.2 4,374,939 + -0.9 4,374,939 + -1.9 4,374,939 + +0.9 4,374,939 + +0.8 4,375,126 + Psest_4196 0.19 +1.2 4,375,305 + Psest_4196 0.37 +0.9 4,375,306 - Psest_4196 0.37 +0.2 4,375,549 + Psest_4196 0.62 -0.2 4,375,549 + Psest_4196 0.62 +1.7
Or see this region's nucleotide sequence