Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4156 and Psest_4157 overlap by 4 nucleotides Psest_4157 and Psest_4158 are separated by 54 nucleotides Psest_4158 and Psest_4159 overlap by 4 nucleotides Psest_4159 and Psest_4160 are separated by 4 nucleotides
Psest_4156: Psest_4156 - DNA-binding winged-HTH domains, at 4,338,133 to 4,338,963
_4156
Psest_4157: Psest_4157 - hypothetical protein, at 4,338,960 to 4,339,442
_4157
Psest_4158: Psest_4158 - Flagellar motor protein, at 4,339,497 to 4,340,435
_4158
Psest_4159: Psest_4159 - flagellar motor stator protein MotA, at 4,340,432 to 4,341,304
_4159
Psest_4160: Psest_4160 - RNA polymerase sigma factor, FliA/WhiG family, at 4,341,309 to 4,342,043
_4160
Position (kb)
4339
4340
4341 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.792 kb on - strand, within Psest_4156 at 4338.856 kb on + strand, within Psest_4156 at 4338.856 kb on + strand, within Psest_4156 at 4338.856 kb on + strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.332 kb on + strand, within Psest_4157 at 4339.411 kb on - strand at 4339.525 kb on + strand at 4339.526 kb on - strand at 4339.526 kb on - strand at 4339.561 kb on + strand at 4339.561 kb on + strand at 4339.585 kb on + strand at 4339.662 kb on + strand, within Psest_4158 at 4339.663 kb on - strand, within Psest_4158 at 4340.578 kb on + strand, within Psest_4159 at 4340.578 kb on + strand, within Psest_4159 at 4340.578 kb on + strand, within Psest_4159 at 4340.578 kb on + strand, within Psest_4159 at 4340.579 kb on - strand, within Psest_4159 at 4340.579 kb on - strand, within Psest_4159 at 4340.579 kb on - strand, within Psest_4159 at 4340.579 kb on - strand, within Psest_4159 at 4340.579 kb on - strand, within Psest_4159 at 4340.582 kb on + strand, within Psest_4159 at 4340.582 kb on + strand, within Psest_4159 at 4340.582 kb on + strand, within Psest_4159 at 4340.583 kb on - strand, within Psest_4159 at 4340.656 kb on - strand, within Psest_4159 at 4340.680 kb on + strand, within Psest_4159 at 4341.057 kb on + strand, within Psest_4159 at 4341.058 kb on - strand, within Psest_4159 at 4341.058 kb on - strand, within Psest_4159 at 4341.058 kb on - strand, within Psest_4159 at 4341.058 kb on - strand, within Psest_4159 at 4341.105 kb on + strand, within Psest_4159 at 4341.105 kb on + strand, within Psest_4159 at 4341.105 kb on + strand, within Psest_4159 at 4341.106 kb on - strand, within Psest_4159 at 4341.106 kb on - strand, within Psest_4159 at 4341.290 kb on + strand at 4341.290 kb on + strand at 4341.290 kb on + strand at 4341.290 kb on + strand at 4341.290 kb on + strand at 4341.291 kb on - strand at 4341.293 kb on + strand at 4341.293 kb on + strand at 4341.293 kb on + strand at 4341.293 kb on + strand at 4341.293 kb on + strand at 4341.293 kb on + strand at 4341.293 kb on + strand at 4341.294 kb on - strand at 4341.294 kb on - strand at 4341.294 kb on - strand at 4341.294 kb on - strand at 4341.310 kb on + strand at 4341.433 kb on + strand, within Psest_4160 at 4341.433 kb on + strand, within Psest_4160 at 4341.434 kb on - strand, within Psest_4160 at 4341.434 kb on - strand, within Psest_4160 at 4341.434 kb on - strand, within Psest_4160 at 4341.434 kb on - strand, within Psest_4160
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 4,338,701 - Psest_4156 0.68 -0.1 4,338,701 - Psest_4156 0.68 +1.4 4,338,701 - Psest_4156 0.68 +0.8 4,338,701 - Psest_4156 0.68 +0.3 4,338,701 - Psest_4156 0.68 +0.3 4,338,701 - Psest_4156 0.68 +1.4 4,338,701 - Psest_4156 0.68 +3.6 4,338,701 - Psest_4156 0.68 -0.9 4,338,701 - Psest_4156 0.68 +0.2 4,338,701 - Psest_4156 0.68 -0.2 4,338,701 - Psest_4156 0.68 -1.5 4,338,701 - Psest_4156 0.68 -1.5 4,338,701 - Psest_4156 0.68 +0.8 4,338,701 - Psest_4156 0.68 -0.1 4,338,701 - Psest_4156 0.68 -0.4 4,338,701 - Psest_4156 0.68 +1.4 4,338,701 - Psest_4156 0.68 -1.2 4,338,701 - Psest_4156 0.68 -0.1 4,338,733 + Psest_4156 0.72 -1.3 4,338,733 + Psest_4156 0.72 +2.0 4,338,733 + Psest_4156 0.72 -0.2 4,338,733 + Psest_4156 0.72 +0.3 4,338,733 + Psest_4156 0.72 +0.8 4,338,733 + Psest_4156 0.72 +0.4 4,338,733 + Psest_4156 0.72 -1.8 4,338,733 + Psest_4156 0.72 -0.5 4,338,734 - Psest_4156 0.72 +0.5 4,338,734 - Psest_4156 0.72 +2.0 4,338,734 - Psest_4156 0.72 +0.5 4,338,734 - Psest_4156 0.72 +2.0 4,338,792 - Psest_4156 0.79 +0.2 4,338,856 + Psest_4156 0.87 +1.5 4,338,856 + Psest_4156 0.87 -0.4 4,338,856 + Psest_4156 0.87 -1.1 4,338,857 - Psest_4156 0.87 -0.4 4,338,857 - Psest_4156 0.87 -0.2 4,338,857 - Psest_4156 0.87 +0.5 4,338,857 - Psest_4156 0.87 +1.1 4,339,068 + Psest_4157 0.22 -1.1 4,339,068 + Psest_4157 0.22 -0.3 4,339,068 + Psest_4157 0.22 -0.5 4,339,068 + Psest_4157 0.22 +1.3 4,339,068 + Psest_4157 0.22 -0.7 4,339,068 + Psest_4157 0.22 -1.3 4,339,069 - Psest_4157 0.23 +1.6 4,339,069 - Psest_4157 0.23 -0.9 4,339,069 - Psest_4157 0.23 -1.7 4,339,069 - Psest_4157 0.23 -0.1 4,339,177 - Psest_4157 0.45 +0.8 4,339,177 - Psest_4157 0.45 +0.8 4,339,177 - Psest_4157 0.45 +2.1 4,339,177 - Psest_4157 0.45 +0.3 4,339,332 + Psest_4157 0.77 -1.5 4,339,411 - -1.7 4,339,525 + +0.6 4,339,526 - -0.5 4,339,526 - +2.1 4,339,561 + +1.1 4,339,561 + -1.0 4,339,585 + +1.5 4,339,662 + Psest_4158 0.18 +1.4 4,339,663 - Psest_4158 0.18 +0.3 4,340,578 + Psest_4159 0.17 +1.5 4,340,578 + Psest_4159 0.17 +0.2 4,340,578 + Psest_4159 0.17 -0.3 4,340,578 + Psest_4159 0.17 -0.9 4,340,579 - Psest_4159 0.17 +0.3 4,340,579 - Psest_4159 0.17 +2.0 4,340,579 - Psest_4159 0.17 -0.8 4,340,579 - Psest_4159 0.17 -1.2 4,340,579 - Psest_4159 0.17 +2.7 4,340,582 + Psest_4159 0.17 -0.7 4,340,582 + Psest_4159 0.17 -1.2 4,340,582 + Psest_4159 0.17 +1.6 4,340,583 - Psest_4159 0.17 -0.7 4,340,656 - Psest_4159 0.26 -1.2 4,340,680 + Psest_4159 0.28 +1.6 4,341,057 + Psest_4159 0.72 +0.3 4,341,058 - Psest_4159 0.72 +0.8 4,341,058 - Psest_4159 0.72 -0.1 4,341,058 - Psest_4159 0.72 -1.6 4,341,058 - Psest_4159 0.72 -0.8 4,341,105 + Psest_4159 0.77 +0.7 4,341,105 + Psest_4159 0.77 -1.2 4,341,105 + Psest_4159 0.77 -0.5 4,341,106 - Psest_4159 0.77 +1.0 4,341,106 - Psest_4159 0.77 +1.5 4,341,290 + +0.4 4,341,290 + +0.5 4,341,290 + -0.1 4,341,290 + -2.9 4,341,290 + +0.5 4,341,291 - -0.9 4,341,293 + +1.5 4,341,293 + +0.6 4,341,293 + +0.6 4,341,293 + +0.3 4,341,293 + +1.1 4,341,293 + -0.6 4,341,293 + -0.2 4,341,294 - -1.9 4,341,294 - -2.7 4,341,294 - +2.7 4,341,294 - +2.9 4,341,310 + +0.3 4,341,433 + Psest_4160 0.17 +1.3 4,341,433 + Psest_4160 0.17 -2.2 4,341,434 - Psest_4160 0.17 +0.9 4,341,434 - Psest_4160 0.17 -0.7 4,341,434 - Psest_4160 0.17 -1.6 4,341,434 - Psest_4160 0.17 -0.1
Or see this region's nucleotide sequence