Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2614

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_2611 and Psest_2612 are separated by 28 nucleotidesPsest_2612 and Psest_2613 are separated by 40 nucleotidesPsest_2613 and Psest_2614 are separated by 12 nucleotidesPsest_2614 and Psest_2615 are separated by 22 nucleotides Psest_2611: Psest_2611 - Glycosyltransferase, at 2,794,614 to 2,795,819 _2611 Psest_2612: Psest_2612 - hypothetical protein, at 2,795,848 to 2,796,189 _2612 Psest_2613: Psest_2613 - hypothetical protein, at 2,796,230 to 2,796,436 _2613 Psest_2614: Psest_2614 - Predicted glycosyltransferases, at 2,796,449 to 2,797,507 _2614 Psest_2615: Psest_2615 - Predicted acyltransferases, at 2,797,530 to 2,798,600 _2615 Position (kb) 2796 2797 2798Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2795.566 kb on - strand, within Psest_2611at 2795.833 kb on + strandat 2795.833 kb on + strandat 2795.859 kb on - strandat 2795.912 kb on + strand, within Psest_2612at 2795.912 kb on + strand, within Psest_2612at 2795.912 kb on + strand, within Psest_2612at 2796.031 kb on + strand, within Psest_2612at 2796.092 kb on + strand, within Psest_2612at 2796.093 kb on - strand, within Psest_2612at 2796.279 kb on - strand, within Psest_2613at 2796.285 kb on - strand, within Psest_2613at 2796.442 kb on + strandat 2796.442 kb on + strandat 2796.443 kb on - strandat 2796.542 kb on + strandat 2796.542 kb on + strandat 2796.542 kb on + strandat 2796.542 kb on + strandat 2796.543 kb on - strandat 2796.543 kb on - strandat 2796.543 kb on - strandat 2796.543 kb on - strandat 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.764 kb on + strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.765 kb on - strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.768 kb on + strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.769 kb on - strand, within Psest_2614at 2796.953 kb on + strand, within Psest_2614at 2796.953 kb on + strand, within Psest_2614at 2796.984 kb on - strand, within Psest_2614at 2797.091 kb on + strand, within Psest_2614at 2797.092 kb on - strand, within Psest_2614at 2797.130 kb on + strand, within Psest_2614at 2797.131 kb on - strand, within Psest_2614at 2797.149 kb on - strand, within Psest_2614at 2797.256 kb on + strand, within Psest_2614at 2797.256 kb on + strand, within Psest_2614at 2797.257 kb on - strand, within Psest_2614at 2797.257 kb on - strand, within Psest_2614at 2797.257 kb on - strand, within Psest_2614at 2797.257 kb on - strand, within Psest_2614at 2797.257 kb on - strand, within Psest_2614at 2797.296 kb on - strand, within Psest_2614at 2797.296 kb on - strand, within Psest_2614at 2797.298 kb on + strand, within Psest_2614at 2797.298 kb on + strand, within Psest_2614at 2797.299 kb on - strand, within Psest_2614at 2797.299 kb on - strand, within Psest_2614at 2797.299 kb on - strand, within Psest_2614at 2797.299 kb on - strand, within Psest_2614at 2797.299 kb on - strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.331 kb on + strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.332 kb on - strand, within Psest_2614at 2797.356 kb on + strand, within Psest_2614at 2797.356 kb on + strand, within Psest_2614at 2797.357 kb on - strand, within Psest_2614at 2797.359 kb on - strand, within Psest_2614at 2797.359 kb on - strand, within Psest_2614at 2797.397 kb on + strand, within Psest_2614at 2797.397 kb on + strand, within Psest_2614at 2797.671 kb on + strand, within Psest_2615at 2797.671 kb on + strand, within Psest_2615at 2797.672 kb on - strand, within Psest_2615at 2797.672 kb on - strand, within Psest_2615at 2797.672 kb on - strand, within Psest_2615at 2797.870 kb on - strand, within Psest_2615at 2797.998 kb on + strand, within Psest_2615at 2798.013 kb on + strand, within Psest_2615at 2798.013 kb on + strand, within Psest_2615at 2798.013 kb on + strand, within Psest_2615at 2798.013 kb on + strand, within Psest_2615at 2798.013 kb on + strand, within Psest_2615at 2798.013 kb on + strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.014 kb on - strand, within Psest_2615at 2798.103 kb on + strand, within Psest_2615at 2798.118 kb on + strand, within Psest_2615at 2798.118 kb on + strand, within Psest_2615at 2798.119 kb on - strand, within Psest_2615at 2798.119 kb on - strand, within Psest_2615at 2798.172 kb on + strand, within Psest_2615at 2798.173 kb on - strand, within Psest_2615at 2798.191 kb on - strand, within Psest_2615at 2798.191 kb on - strand, within Psest_2615at 2798.191 kb on - strand, within Psest_2615at 2798.191 kb on - strand, within Psest_2615at 2798.191 kb on - strand, within Psest_2615at 2798.191 kb on - strand, within Psest_2615at 2798.308 kb on - strand, within Psest_2615at 2798.308 kb on - strand, within Psest_2615at 2798.380 kb on - strand, within Psest_2615at 2798.388 kb on + strand, within Psest_2615at 2798.389 kb on - strand, within Psest_2615at 2798.389 kb on - strand, within Psest_2615at 2798.389 kb on - strand, within Psest_2615at 2798.389 kb on - strand, within Psest_2615

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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2,795,566 - Psest_2611 0.79 +0.7
2,795,833 + +1.9
2,795,833 + -0.5
2,795,859 - +0.3
2,795,912 + Psest_2612 0.19 -0.9
2,795,912 + Psest_2612 0.19 -1.4
2,795,912 + Psest_2612 0.19 -0.4
2,796,031 + Psest_2612 0.54 +0.2
2,796,092 + Psest_2612 0.71 -1.1
2,796,093 - Psest_2612 0.72 -0.8
2,796,279 - Psest_2613 0.24 +1.1
2,796,285 - Psest_2613 0.27 +4.6
2,796,442 + +0.5
2,796,442 + -1.8
2,796,443 - +1.0
2,796,542 + +0.5
2,796,542 + +0.9
2,796,542 + +0.9
2,796,542 + +0.2
2,796,543 - +0.6
2,796,543 - -0.8
2,796,543 - +1.4
2,796,543 - -0.1
2,796,764 + Psest_2614 0.30 +0.3
2,796,764 + Psest_2614 0.30 -0.2
2,796,764 + Psest_2614 0.30 +0.6
2,796,764 + Psest_2614 0.30 +0.1
2,796,764 + Psest_2614 0.30 +0.7
2,796,764 + Psest_2614 0.30 +0.3
2,796,764 + Psest_2614 0.30 +0.8
2,796,764 + Psest_2614 0.30 +0.4
2,796,764 + Psest_2614 0.30 +0.3
2,796,765 - Psest_2614 0.30 +1.5
2,796,765 - Psest_2614 0.30 +0.8
2,796,765 - Psest_2614 0.30 +0.1
2,796,765 - Psest_2614 0.30 -0.6
2,796,765 - Psest_2614 0.30 +1.4
2,796,765 - Psest_2614 0.30 +1.3
2,796,765 - Psest_2614 0.30 -0.1
2,796,765 - Psest_2614 0.30 +1.1
2,796,765 - Psest_2614 0.30 +0.6
2,796,768 + Psest_2614 0.30 +1.7
2,796,768 + Psest_2614 0.30 +1.0
2,796,768 + Psest_2614 0.30 +0.7
2,796,768 + Psest_2614 0.30 +1.7
2,796,768 + Psest_2614 0.30 +1.8
2,796,768 + Psest_2614 0.30 -0.9
2,796,768 + Psest_2614 0.30 +1.1
2,796,769 - Psest_2614 0.30 +1.1
2,796,769 - Psest_2614 0.30 +0.3
2,796,769 - Psest_2614 0.30 +1.0
2,796,769 - Psest_2614 0.30 +0.7
2,796,769 - Psest_2614 0.30 +1.7
2,796,769 - Psest_2614 0.30 -1.0
2,796,769 - Psest_2614 0.30 +1.2
2,796,769 - Psest_2614 0.30 +1.3
2,796,769 - Psest_2614 0.30 +1.2
2,796,769 - Psest_2614 0.30 +3.0
2,796,769 - Psest_2614 0.30 -0.3
2,796,769 - Psest_2614 0.30 -0.0
2,796,769 - Psest_2614 0.30 +0.6
2,796,769 - Psest_2614 0.30 +1.5
2,796,953 + Psest_2614 0.48 +0.4
2,796,953 + Psest_2614 0.48 +0.9
2,796,984 - Psest_2614 0.51 +1.9
2,797,091 + Psest_2614 0.61 +2.2
2,797,092 - Psest_2614 0.61 +0.4
2,797,130 + Psest_2614 0.64 -0.8
2,797,131 - Psest_2614 0.64 +0.2
2,797,149 - Psest_2614 0.66 +0.9
2,797,256 + Psest_2614 0.76 +1.3
2,797,256 + Psest_2614 0.76 +2.1
2,797,257 - Psest_2614 0.76 +1.9
2,797,257 - Psest_2614 0.76 +0.4
2,797,257 - Psest_2614 0.76 +1.5
2,797,257 - Psest_2614 0.76 +1.5
2,797,257 - Psest_2614 0.76 +1.3
2,797,296 - Psest_2614 0.80 +1.1
2,797,296 - Psest_2614 0.80 +1.7
2,797,298 + Psest_2614 0.80 +1.8
2,797,298 + Psest_2614 0.80 +1.0
2,797,299 - Psest_2614 0.80 -0.1
2,797,299 - Psest_2614 0.80 +1.1
2,797,299 - Psest_2614 0.80 +0.8
2,797,299 - Psest_2614 0.80 +2.7
2,797,299 - Psest_2614 0.80 +0.4
2,797,331 + Psest_2614 0.83 +2.4
2,797,331 + Psest_2614 0.83 +1.5
2,797,331 + Psest_2614 0.83 +0.2
2,797,331 + Psest_2614 0.83 +0.5
2,797,331 + Psest_2614 0.83 -0.1
2,797,331 + Psest_2614 0.83 +0.4
2,797,331 + Psest_2614 0.83 +0.1
2,797,331 + Psest_2614 0.83 +0.8
2,797,331 + Psest_2614 0.83 +2.1
2,797,331 + Psest_2614 0.83 +0.9
2,797,331 + Psest_2614 0.83 -0.8
2,797,331 + Psest_2614 0.83 +1.1
2,797,331 + Psest_2614 0.83 -1.2
2,797,331 + Psest_2614 0.83 +0.1
2,797,331 + Psest_2614 0.83 +2.4
2,797,331 + Psest_2614 0.83 -0.4
2,797,331 + Psest_2614 0.83 -0.4
2,797,331 + Psest_2614 0.83 -0.6
2,797,331 + Psest_2614 0.83 +0.3
2,797,331 + Psest_2614 0.83 +0.1
2,797,332 - Psest_2614 0.83 -0.9
2,797,332 - Psest_2614 0.83 +1.2
2,797,332 - Psest_2614 0.83 +0.0
2,797,332 - Psest_2614 0.83 +0.4
2,797,332 - Psest_2614 0.83 +0.3
2,797,332 - Psest_2614 0.83 +0.1
2,797,332 - Psest_2614 0.83 -0.1
2,797,332 - Psest_2614 0.83 +1.1
2,797,332 - Psest_2614 0.83 +0.6
2,797,332 - Psest_2614 0.83 +0.2
2,797,332 - Psest_2614 0.83 +0.4
2,797,332 - Psest_2614 0.83 +0.8
2,797,332 - Psest_2614 0.83 +1.1
2,797,332 - Psest_2614 0.83 +1.2
2,797,332 - Psest_2614 0.83 -0.3
2,797,332 - Psest_2614 0.83 -0.3
2,797,332 - Psest_2614 0.83 +1.9
2,797,332 - Psest_2614 0.83 -2.6
2,797,332 - Psest_2614 0.83 -0.2
2,797,332 - Psest_2614 0.83 +1.8
2,797,332 - Psest_2614 0.83 -0.2
2,797,332 - Psest_2614 0.83 +2.2
2,797,332 - Psest_2614 0.83 +0.9
2,797,332 - Psest_2614 0.83 +1.1
2,797,332 - Psest_2614 0.83 -0.0
2,797,356 + Psest_2614 0.86 +1.0
2,797,356 + Psest_2614 0.86 +0.6
2,797,357 - Psest_2614 0.86 +0.4
2,797,359 - Psest_2614 0.86 +1.1
2,797,359 - Psest_2614 0.86 -1.4
2,797,397 + Psest_2614 0.90 +0.7
2,797,397 + Psest_2614 0.90 +0.5
2,797,671 + Psest_2615 0.13 -0.3
2,797,671 + Psest_2615 0.13 +0.8
2,797,672 - Psest_2615 0.13 -0.1
2,797,672 - Psest_2615 0.13 -2.1
2,797,672 - Psest_2615 0.13 +1.7
2,797,870 - Psest_2615 0.32 -1.5
2,797,998 + Psest_2615 0.44 +0.9
2,798,013 + Psest_2615 0.45 +4.2
2,798,013 + Psest_2615 0.45 -0.8
2,798,013 + Psest_2615 0.45 +3.5
2,798,013 + Psest_2615 0.45 +0.6
2,798,013 + Psest_2615 0.45 +0.6
2,798,013 + Psest_2615 0.45 +1.1
2,798,014 - Psest_2615 0.45 -0.2
2,798,014 - Psest_2615 0.45 -0.2
2,798,014 - Psest_2615 0.45 -1.2
2,798,014 - Psest_2615 0.45 +0.6
2,798,014 - Psest_2615 0.45 +2.2
2,798,014 - Psest_2615 0.45 +0.6
2,798,014 - Psest_2615 0.45 +1.2
2,798,103 + Psest_2615 0.54 +1.2
2,798,118 + Psest_2615 0.55 -0.5
2,798,118 + Psest_2615 0.55 +0.1
2,798,119 - Psest_2615 0.55 -0.3
2,798,119 - Psest_2615 0.55 +1.2
2,798,172 + Psest_2615 0.60 +1.1
2,798,173 - Psest_2615 0.60 +0.9
2,798,191 - Psest_2615 0.62 +3.0
2,798,191 - Psest_2615 0.62 -1.4
2,798,191 - Psest_2615 0.62 +0.5
2,798,191 - Psest_2615 0.62 -2.9
2,798,191 - Psest_2615 0.62 +0.1
2,798,191 - Psest_2615 0.62 +1.1
2,798,308 - Psest_2615 0.73 +1.1
2,798,308 - Psest_2615 0.73 -1.7
2,798,380 - Psest_2615 0.79 +0.1
2,798,388 + Psest_2615 0.80 -1.2
2,798,389 - Psest_2615 0.80 +0.1
2,798,389 - Psest_2615 0.80 -0.4
2,798,389 - Psest_2615 0.80 -1.8
2,798,389 - Psest_2615 0.80 +0.8

Or see this region's nucleotide sequence