Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2367 and Psest_2368 are separated by 15 nucleotides Psest_2368 and Psest_2369 are separated by 64 nucleotides Psest_2369 and Psest_2370 overlap by 12 nucleotides
Psest_2367: Psest_2367 - glutamine synthetase, type III, at 2,520,812 to 2,522,176
_2367
Psest_2368: Psest_2368 - ABC transporter periplasmic binding protein, urea carboxylase region, at 2,522,192 to 2,523,256
_2368
Psest_2369: Psest_2369 - Transcriptional regulator, at 2,523,321 to 2,523,941
_2369
Psest_2370: Psest_2370 - Protein of unknown function (DUF1652)., at 2,523,930 to 2,524,202
_2370
Position (kb)
2522
2523
2524 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2521.418 kb on + strand, within Psest_2367 at 2521.419 kb on - strand, within Psest_2367 at 2521.419 kb on - strand, within Psest_2367 at 2521.419 kb on - strand, within Psest_2367 at 2521.553 kb on + strand, within Psest_2367 at 2521.553 kb on + strand, within Psest_2367 at 2521.554 kb on - strand, within Psest_2367 at 2521.554 kb on - strand, within Psest_2367 at 2521.554 kb on - strand, within Psest_2367 at 2521.620 kb on - strand, within Psest_2367 at 2521.718 kb on + strand, within Psest_2367 at 2521.719 kb on - strand, within Psest_2367 at 2521.719 kb on - strand, within Psest_2367 at 2521.719 kb on - strand, within Psest_2367 at 2521.719 kb on - strand, within Psest_2367 at 2521.719 kb on - strand, within Psest_2367 at 2521.782 kb on - strand, within Psest_2367 at 2521.871 kb on + strand, within Psest_2367 at 2521.872 kb on - strand, within Psest_2367 at 2521.958 kb on + strand, within Psest_2367 at 2521.958 kb on + strand, within Psest_2367 at 2521.959 kb on - strand, within Psest_2367 at 2521.959 kb on - strand, within Psest_2367 at 2521.959 kb on - strand, within Psest_2367 at 2521.964 kb on + strand, within Psest_2367 at 2521.964 kb on + strand, within Psest_2367 at 2521.964 kb on + strand, within Psest_2367 at 2522.081 kb on + strand at 2522.081 kb on + strand at 2522.082 kb on - strand at 2522.159 kb on + strand at 2522.160 kb on - strand at 2522.303 kb on + strand, within Psest_2368 at 2522.303 kb on + strand, within Psest_2368 at 2522.303 kb on + strand, within Psest_2368 at 2522.303 kb on + strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.304 kb on - strand, within Psest_2368 at 2522.327 kb on + strand, within Psest_2368 at 2522.327 kb on + strand, within Psest_2368 at 2522.327 kb on + strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.369 kb on + strand, within Psest_2368 at 2522.370 kb on - strand, within Psest_2368 at 2522.370 kb on - strand, within Psest_2368 at 2522.405 kb on + strand, within Psest_2368 at 2522.406 kb on - strand, within Psest_2368 at 2522.406 kb on - strand, within Psest_2368 at 2522.406 kb on - strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.764 kb on - strand, within Psest_2368 at 2522.764 kb on - strand, within Psest_2368 at 2522.764 kb on - strand, within Psest_2368 at 2522.907 kb on - strand, within Psest_2368 at 2523.000 kb on - strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.032 kb on + strand, within Psest_2368 at 2523.032 kb on + strand, within Psest_2368 at 2523.033 kb on - strand, within Psest_2368 at 2523.097 kb on - strand, within Psest_2368 at 2523.224 kb on + strand at 2523.224 kb on + strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.403 kb on - strand, within Psest_2369 at 2523.462 kb on + strand, within Psest_2369 at 2523.462 kb on + strand, within Psest_2369 at 2523.492 kb on + strand, within Psest_2369 at 2523.493 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2524.042 kb on - strand, within Psest_2370 at 2524.153 kb on + strand, within Psest_2370 at 2524.154 kb on - strand, within Psest_2370 at 2524.154 kb on - strand, within Psest_2370 at 2524.156 kb on + strand, within Psest_2370 at 2524.157 kb on - strand, within Psest_2370 at 2524.237 kb on - strand at 2524.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,521,418 + Psest_2367 0.44 -0.9 2,521,419 - Psest_2367 0.44 -0.0 2,521,419 - Psest_2367 0.44 -0.5 2,521,419 - Psest_2367 0.44 +0.1 2,521,553 + Psest_2367 0.54 -1.3 2,521,553 + Psest_2367 0.54 -0.4 2,521,554 - Psest_2367 0.54 +0.2 2,521,554 - Psest_2367 0.54 +1.1 2,521,554 - Psest_2367 0.54 -0.8 2,521,620 - Psest_2367 0.59 -0.1 2,521,718 + Psest_2367 0.66 +0.1 2,521,719 - Psest_2367 0.66 +0.1 2,521,719 - Psest_2367 0.66 +1.2 2,521,719 - Psest_2367 0.66 -0.1 2,521,719 - Psest_2367 0.66 +2.3 2,521,719 - Psest_2367 0.66 +0.5 2,521,782 - Psest_2367 0.71 +3.2 2,521,871 + Psest_2367 0.78 -1.8 2,521,872 - Psest_2367 0.78 -0.5 2,521,958 + Psest_2367 0.84 -3.6 2,521,958 + Psest_2367 0.84 -1.8 2,521,959 - Psest_2367 0.84 +1.8 2,521,959 - Psest_2367 0.84 +0.3 2,521,959 - Psest_2367 0.84 -1.8 2,521,964 + Psest_2367 0.84 -1.6 2,521,964 + Psest_2367 0.84 -1.9 2,521,964 + Psest_2367 0.84 +1.1 2,522,081 + -1.3 2,522,081 + -0.1 2,522,082 - +0.4 2,522,159 + +1.7 2,522,160 - -2.2 2,522,303 + Psest_2368 0.10 -0.3 2,522,303 + Psest_2368 0.10 +0.5 2,522,303 + Psest_2368 0.10 +2.1 2,522,303 + Psest_2368 0.10 -0.6 2,522,304 - Psest_2368 0.11 +0.6 2,522,304 - Psest_2368 0.11 -0.2 2,522,304 - Psest_2368 0.11 +0.1 2,522,304 - Psest_2368 0.11 +0.8 2,522,304 - Psest_2368 0.11 +0.2 2,522,304 - Psest_2368 0.11 -0.6 2,522,304 - Psest_2368 0.11 -1.5 2,522,327 + Psest_2368 0.13 -0.1 2,522,327 + Psest_2368 0.13 -1.9 2,522,327 + Psest_2368 0.13 +0.7 2,522,328 - Psest_2368 0.13 -1.0 2,522,328 - Psest_2368 0.13 +1.1 2,522,328 - Psest_2368 0.13 -0.0 2,522,328 - Psest_2368 0.13 +0.1 2,522,369 + Psest_2368 0.17 -0.2 2,522,370 - Psest_2368 0.17 -2.1 2,522,370 - Psest_2368 0.17 -3.6 2,522,405 + Psest_2368 0.20 +0.0 2,522,406 - Psest_2368 0.20 +0.3 2,522,406 - Psest_2368 0.20 +0.2 2,522,406 - Psest_2368 0.20 +1.5 2,522,627 + Psest_2368 0.41 +0.2 2,522,627 + Psest_2368 0.41 -0.3 2,522,627 + Psest_2368 0.41 +1.3 2,522,627 + Psest_2368 0.41 +3.0 2,522,628 - Psest_2368 0.41 -0.6 2,522,628 - Psest_2368 0.41 +1.5 2,522,628 - Psest_2368 0.41 +0.9 2,522,628 - Psest_2368 0.41 -0.1 2,522,628 - Psest_2368 0.41 -1.4 2,522,764 - Psest_2368 0.54 +0.1 2,522,764 - Psest_2368 0.54 +1.5 2,522,764 - Psest_2368 0.54 -0.8 2,522,907 - Psest_2368 0.67 +2.1 2,523,000 - Psest_2368 0.76 -0.4 2,523,025 + Psest_2368 0.78 -0.2 2,523,025 + Psest_2368 0.78 +0.3 2,523,025 + Psest_2368 0.78 +0.4 2,523,025 + Psest_2368 0.78 -2.2 2,523,025 + Psest_2368 0.78 +0.9 2,523,025 + Psest_2368 0.78 -2.2 2,523,025 + Psest_2368 0.78 -0.8 2,523,025 + Psest_2368 0.78 +0.9 2,523,025 + Psest_2368 0.78 -1.5 2,523,025 + Psest_2368 0.78 +0.6 2,523,025 + Psest_2368 0.78 +0.9 2,523,025 + Psest_2368 0.78 +0.7 2,523,025 + Psest_2368 0.78 +0.3 2,523,025 + Psest_2368 0.78 +2.6 2,523,025 + Psest_2368 0.78 -1.0 2,523,026 - Psest_2368 0.78 +2.0 2,523,026 - Psest_2368 0.78 -0.7 2,523,026 - Psest_2368 0.78 -1.6 2,523,026 - Psest_2368 0.78 +1.1 2,523,026 - Psest_2368 0.78 +0.5 2,523,026 - Psest_2368 0.78 -1.3 2,523,026 - Psest_2368 0.78 +0.2 2,523,026 - Psest_2368 0.78 +0.7 2,523,026 - Psest_2368 0.78 -1.9 2,523,026 - Psest_2368 0.78 -1.4 2,523,026 - Psest_2368 0.78 +1.2 2,523,026 - Psest_2368 0.78 -0.5 2,523,026 - Psest_2368 0.78 +0.7 2,523,026 - Psest_2368 0.78 +1.8 2,523,026 - Psest_2368 0.78 -1.6 2,523,026 - Psest_2368 0.78 +0.5 2,523,026 - Psest_2368 0.78 -1.2 2,523,026 - Psest_2368 0.78 -0.1 2,523,026 - Psest_2368 0.78 -1.4 2,523,026 - Psest_2368 0.78 +0.2 2,523,026 - Psest_2368 0.78 -0.6 2,523,032 + Psest_2368 0.79 -1.4 2,523,032 + Psest_2368 0.79 +0.3 2,523,033 - Psest_2368 0.79 +0.7 2,523,097 - Psest_2368 0.85 -2.8 2,523,224 + +0.5 2,523,224 + +2.2 2,523,225 - -1.6 2,523,225 - -0.9 2,523,225 - -0.4 2,523,225 - -0.9 2,523,225 - -0.5 2,523,225 - -1.7 2,523,225 - +0.2 2,523,225 - +0.5 2,523,403 - Psest_2369 0.13 -0.2 2,523,462 + Psest_2369 0.23 +1.8 2,523,462 + Psest_2369 0.23 -0.8 2,523,492 + Psest_2369 0.28 -0.2 2,523,493 - Psest_2369 0.28 +0.1 2,523,802 - Psest_2369 0.77 +1.4 2,523,802 - Psest_2369 0.77 -0.3 2,523,802 - Psest_2369 0.77 +0.1 2,523,802 - Psest_2369 0.77 +1.1 2,524,042 - Psest_2370 0.41 -2.0 2,524,153 + Psest_2370 0.82 +1.2 2,524,154 - Psest_2370 0.82 -1.5 2,524,154 - Psest_2370 0.82 -2.0 2,524,156 + Psest_2370 0.83 +0.3 2,524,157 - Psest_2370 0.83 -1.4 2,524,237 - -0.4 2,524,237 - +0.9
Or see this region's nucleotide sequence