Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2149 and Psest_2150 are separated by 95 nucleotides Psest_2150 and Psest_2151 are separated by 289 nucleotides
Psest_2149: Psest_2149 - Ku protein, prokaryotic, at 2,295,019 to 2,295,900
_2149
Psest_2150: Psest_2150 - DNA polymerase LigD, polymerase domain, at 2,295,996 to 2,296,919
_2150
Psest_2151: Psest_2151 - formate dehydrogenase, alpha subunit, proteobacterial-type, at 2,297,209 to 2,300,274
_2151
Position (kb)
2295
2296
2297 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2295.062 kb on + strand at 2295.217 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.352 kb on + strand, within Psest_2149 at 2295.353 kb on - strand, within Psest_2149 at 2295.385 kb on + strand, within Psest_2149 at 2295.446 kb on + strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.541 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.650 kb on - strand, within Psest_2149 at 2296.110 kb on + strand, within Psest_2150 at 2296.114 kb on - strand, within Psest_2150 at 2296.114 kb on - strand, within Psest_2150 at 2296.821 kb on + strand, within Psest_2150 at 2297.176 kb on + strand at 2297.176 kb on + strand at 2297.176 kb on + strand at 2297.177 kb on - strand at 2297.358 kb on + strand at 2297.358 kb on + strand at 2297.358 kb on + strand at 2297.364 kb on + strand at 2297.364 kb on + strand at 2297.365 kb on - strand at 2297.365 kb on - strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.369 kb on - strand at 2297.398 kb on + strand at 2297.398 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,295,062 + +1.0 2,295,217 + Psest_2149 0.22 -0.6 2,295,232 + Psest_2149 0.24 +1.1 2,295,232 + Psest_2149 0.24 +0.9 2,295,232 + Psest_2149 0.24 -0.5 2,295,233 - Psest_2149 0.24 -1.5 2,295,233 - Psest_2149 0.24 -0.0 2,295,233 - Psest_2149 0.24 -0.4 2,295,233 - Psest_2149 0.24 +0.0 2,295,233 - Psest_2149 0.24 -1.5 2,295,233 - Psest_2149 0.24 +1.6 2,295,233 - Psest_2149 0.24 -1.8 2,295,334 + Psest_2149 0.36 -0.1 2,295,334 + Psest_2149 0.36 -1.6 2,295,334 + Psest_2149 0.36 +0.9 2,295,335 - Psest_2149 0.36 -0.0 2,295,335 - Psest_2149 0.36 +0.6 2,295,335 - Psest_2149 0.36 -0.3 2,295,335 - Psest_2149 0.36 -1.1 2,295,349 + Psest_2149 0.37 -1.1 2,295,349 + Psest_2149 0.37 +0.7 2,295,350 - Psest_2149 0.38 +0.2 2,295,350 - Psest_2149 0.38 -0.7 2,295,350 - Psest_2149 0.38 +0.0 2,295,350 - Psest_2149 0.38 +1.5 2,295,352 + Psest_2149 0.38 +1.0 2,295,353 - Psest_2149 0.38 -0.7 2,295,385 + Psest_2149 0.41 -0.8 2,295,446 + Psest_2149 0.48 +0.1 2,295,447 - Psest_2149 0.49 +0.6 2,295,447 - Psest_2149 0.49 -0.5 2,295,450 + Psest_2149 0.49 +0.6 2,295,450 + Psest_2149 0.49 +1.1 2,295,450 + Psest_2149 0.49 -0.8 2,295,450 + Psest_2149 0.49 +0.8 2,295,451 - Psest_2149 0.49 -1.1 2,295,451 - Psest_2149 0.49 +0.3 2,295,451 - Psest_2149 0.49 -1.3 2,295,541 + Psest_2149 0.59 +0.4 2,295,649 + Psest_2149 0.71 +0.7 2,295,649 + Psest_2149 0.71 -0.2 2,295,649 + Psest_2149 0.71 +0.7 2,295,649 + Psest_2149 0.71 -0.3 2,295,650 - Psest_2149 0.72 -0.8 2,296,110 + Psest_2150 0.12 +0.1 2,296,114 - Psest_2150 0.13 +2.6 2,296,114 - Psest_2150 0.13 -0.0 2,296,821 + Psest_2150 0.89 +1.6 2,297,176 + -0.0 2,297,176 + +1.0 2,297,176 + -0.1 2,297,177 - -0.4 2,297,358 + -2.2 2,297,358 + -0.2 2,297,358 + -1.0 2,297,364 + +1.0 2,297,364 + -1.0 2,297,365 - -0.7 2,297,365 - +0.2 2,297,368 + -0.1 2,297,368 + -2.1 2,297,368 + -0.1 2,297,368 + +1.9 2,297,368 + +0.0 2,297,369 - -0.7 2,297,398 + -0.2 2,297,398 + -2.2
Or see this region's nucleotide sequence