Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1717 and Psest_1718 are separated by 239 nucleotides Psest_1718 and Psest_1719 are separated by 13 nucleotides
Psest_1717: Psest_1717 - benzoate transporter, at 1,823,283 to 1,824,470
_1717
Psest_1718: Psest_1718 - flagellar hook-basal body complex protein FliE, at 1,824,710 to 1,825,039
_1718
Psest_1719: Psest_1719 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 1,825,053 to 1,826,837
_1719
Position (kb)
1824
1825
1826 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1823.762 kb on + strand, within Psest_1717 at 1823.762 kb on + strand, within Psest_1717 at 1823.971 kb on + strand, within Psest_1717 at 1823.971 kb on + strand, within Psest_1717 at 1823.972 kb on - strand, within Psest_1717 at 1824.024 kb on + strand, within Psest_1717 at 1824.363 kb on + strand at 1824.364 kb on - strand at 1824.377 kb on + strand at 1824.378 kb on - strand at 1824.428 kb on + strand at 1824.480 kb on + strand at 1824.484 kb on + strand at 1824.484 kb on + strand at 1824.485 kb on - strand at 1824.485 kb on - strand at 1824.485 kb on - strand at 1824.487 kb on + strand at 1824.487 kb on + strand at 1824.488 kb on - strand at 1824.522 kb on + strand at 1824.522 kb on + strand at 1824.523 kb on - strand at 1824.616 kb on - strand at 1824.707 kb on + strand at 1824.888 kb on + strand, within Psest_1718 at 1824.987 kb on + strand, within Psest_1718 at 1824.987 kb on + strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.991 kb on + strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1825.149 kb on - strand at 1825.322 kb on + strand, within Psest_1719 at 1825.639 kb on - strand, within Psest_1719 at 1825.833 kb on + strand, within Psest_1719
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 1,823,762 + Psest_1717 0.40 -0.4 1,823,762 + Psest_1717 0.40 -0.0 1,823,971 + Psest_1717 0.58 +0.4 1,823,971 + Psest_1717 0.58 -0.4 1,823,972 - Psest_1717 0.58 -0.0 1,824,024 + Psest_1717 0.62 -0.9 1,824,363 + -2.3 1,824,364 - +0.4 1,824,377 + -0.0 1,824,378 - -0.2 1,824,428 + -1.3 1,824,480 + +1.1 1,824,484 + -0.3 1,824,484 + +0.8 1,824,485 - -1.6 1,824,485 - +0.7 1,824,485 - +1.2 1,824,487 + +0.3 1,824,487 + -2.3 1,824,488 - +0.6 1,824,522 + +0.0 1,824,522 + -0.5 1,824,523 - -0.2 1,824,616 - -2.9 1,824,707 + -1.6 1,824,888 + Psest_1718 0.54 -0.8 1,824,987 + Psest_1718 0.84 +1.6 1,824,987 + Psest_1718 0.84 -0.5 1,824,988 - Psest_1718 0.84 +0.2 1,824,988 - Psest_1718 0.84 +3.2 1,824,988 - Psest_1718 0.84 +0.8 1,824,988 - Psest_1718 0.84 +5.2 1,824,991 + Psest_1718 0.85 +1.4 1,824,992 - Psest_1718 0.85 +1.3 1,824,992 - Psest_1718 0.85 +1.4 1,824,992 - Psest_1718 0.85 +0.4 1,825,149 - -0.4 1,825,322 + Psest_1719 0.15 -0.5 1,825,639 - Psest_1719 0.33 +2.1 1,825,833 + Psest_1719 0.44 +2.2
Or see this region's nucleotide sequence