Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1381 and Psest_1382 overlap by 4 nucleotides Psest_1382 and Psest_1383 are separated by 104 nucleotides
Psest_1381: Psest_1381 - Predicted alpha/beta hydrolase, at 1,491,207 to 1,492,163
_1381
Psest_1382: Psest_1382 - Transcription elongation factor, at 1,492,160 to 1,492,636
_1382
Psest_1383: Psest_1383 - DNA topoisomerase III, bacteria and conjugative plasmid, at 1,492,741 to 1,494,681
_1383
Position (kb)
1492
1493 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.245 kb on + strand at 1491.246 kb on - strand at 1491.246 kb on - strand at 1491.246 kb on - strand at 1491.246 kb on - strand at 1491.246 kb on - strand at 1491.385 kb on - strand, within Psest_1381 at 1491.486 kb on + strand, within Psest_1381 at 1491.487 kb on - strand, within Psest_1381 at 1491.533 kb on + strand, within Psest_1381 at 1491.609 kb on + strand, within Psest_1381 at 1491.609 kb on + strand, within Psest_1381 at 1491.610 kb on - strand, within Psest_1381 at 1491.610 kb on - strand, within Psest_1381 at 1491.616 kb on - strand, within Psest_1381 at 1491.616 kb on - strand, within Psest_1381 at 1491.628 kb on - strand, within Psest_1381 at 1491.628 kb on - strand, within Psest_1381 at 1491.654 kb on + strand, within Psest_1381 at 1491.654 kb on + strand, within Psest_1381 at 1491.703 kb on - strand, within Psest_1381 at 1492.146 kb on + strand at 1492.147 kb on - strand at 1492.147 kb on - strand at 1492.148 kb on + strand at 1492.149 kb on - strand at 1492.149 kb on - strand at 1492.149 kb on - strand at 1492.149 kb on - strand at 1492.149 kb on - strand at 1492.286 kb on + strand, within Psest_1382 at 1492.286 kb on + strand, within Psest_1382 at 1492.286 kb on + strand, within Psest_1382 at 1492.287 kb on - strand, within Psest_1382 at 1492.287 kb on - strand, within Psest_1382 at 1492.287 kb on - strand, within Psest_1382 at 1492.613 kb on + strand at 1492.613 kb on + strand at 1492.613 kb on + strand at 1492.613 kb on + strand at 1492.614 kb on - strand at 1492.634 kb on + strand at 1492.650 kb on - strand at 1493.271 kb on - strand, within Psest_1383 at 1493.444 kb on + strand, within Psest_1383 at 1493.444 kb on + strand, within Psest_1383 at 1493.495 kb on + strand, within Psest_1383 at 1493.495 kb on + strand, within Psest_1383
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 1,491,245 + +0.6 1,491,245 + +0.2 1,491,245 + -0.6 1,491,245 + +0.5 1,491,245 + +1.0 1,491,245 + +1.2 1,491,245 + +0.6 1,491,245 + -0.2 1,491,245 + -1.3 1,491,245 + +0.8 1,491,246 - +0.2 1,491,246 - +0.8 1,491,246 - -0.6 1,491,246 - +0.8 1,491,246 - -0.4 1,491,385 - Psest_1381 0.19 -0.9 1,491,486 + Psest_1381 0.29 +1.0 1,491,487 - Psest_1381 0.29 +0.1 1,491,533 + Psest_1381 0.34 +1.3 1,491,609 + Psest_1381 0.42 +1.7 1,491,609 + Psest_1381 0.42 -0.5 1,491,610 - Psest_1381 0.42 +1.6 1,491,610 - Psest_1381 0.42 +0.1 1,491,616 - Psest_1381 0.43 +0.1 1,491,616 - Psest_1381 0.43 +1.2 1,491,628 - Psest_1381 0.44 -0.9 1,491,628 - Psest_1381 0.44 -0.7 1,491,654 + Psest_1381 0.47 +0.3 1,491,654 + Psest_1381 0.47 -1.0 1,491,703 - Psest_1381 0.52 -0.7 1,492,146 + -0.0 1,492,147 - +0.3 1,492,147 - +0.4 1,492,148 + -2.7 1,492,149 - -1.0 1,492,149 - -0.4 1,492,149 - +1.0 1,492,149 - +2.4 1,492,149 - +2.0 1,492,286 + Psest_1382 0.26 +0.3 1,492,286 + Psest_1382 0.26 +1.5 1,492,286 + Psest_1382 0.26 -1.3 1,492,287 - Psest_1382 0.27 +0.7 1,492,287 - Psest_1382 0.27 +0.8 1,492,287 - Psest_1382 0.27 +1.4 1,492,613 + -1.6 1,492,613 + +1.5 1,492,613 + -1.2 1,492,613 + +0.8 1,492,614 - -0.2 1,492,634 + -0.9 1,492,650 - -2.3 1,493,271 - Psest_1383 0.27 -1.3 1,493,444 + Psest_1383 0.36 +1.3 1,493,444 + Psest_1383 0.36 -0.6 1,493,495 + Psest_1383 0.39 +1.1 1,493,495 + Psest_1383 0.39 +0.5
Or see this region's nucleotide sequence