Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1351 and Psest_1352 are separated by 253 nucleotides Psest_1352 and Psest_1353 are separated by 144 nucleotides Psest_1353 and Psest_1354 are separated by 16 nucleotides
Psest_1351: Psest_1351 - hypothetical protein, at 1,461,904 to 1,463,505
_1351
Psest_1352: Psest_1352 - Predicted membrane protein, at 1,463,759 to 1,464,922
_1352
Psest_1353: Psest_1353 - Uncharacterized protein conserved in bacteria, at 1,465,067 to 1,465,486
_1353
Psest_1354: Psest_1354 - Uncharacterized protein conserved in bacteria, at 1,465,503 to 1,465,922
_1354
Position (kb)
1463
1464
1465 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1462.988 kb on + strand, within Psest_1351 at 1463.147 kb on - strand, within Psest_1351 at 1463.147 kb on - strand, within Psest_1351 at 1463.147 kb on - strand, within Psest_1351 at 1463.189 kb on + strand, within Psest_1351 at 1463.329 kb on + strand, within Psest_1351 at 1463.329 kb on + strand, within Psest_1351 at 1463.329 kb on + strand, within Psest_1351 at 1463.505 kb on + strand at 1463.505 kb on + strand at 1463.505 kb on + strand at 1463.505 kb on + strand at 1463.505 kb on + strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.506 kb on - strand at 1463.692 kb on + strand at 1463.693 kb on - strand at 1463.766 kb on + strand at 1463.766 kb on + strand at 1463.767 kb on - strand at 1463.935 kb on - strand, within Psest_1352 at 1463.935 kb on - strand, within Psest_1352 at 1463.935 kb on - strand, within Psest_1352 at 1463.935 kb on - strand, within Psest_1352 at 1463.952 kb on + strand, within Psest_1352 at 1463.952 kb on + strand, within Psest_1352 at 1463.953 kb on - strand, within Psest_1352 at 1463.953 kb on - strand, within Psest_1352 at 1463.967 kb on + strand, within Psest_1352 at 1463.968 kb on - strand, within Psest_1352 at 1463.968 kb on - strand, within Psest_1352 at 1463.968 kb on - strand, within Psest_1352 at 1463.968 kb on - strand, within Psest_1352 at 1463.993 kb on + strand, within Psest_1352 at 1463.994 kb on - strand, within Psest_1352 at 1464.039 kb on + strand, within Psest_1352 at 1464.039 kb on + strand, within Psest_1352 at 1464.040 kb on - strand, within Psest_1352 at 1464.047 kb on + strand, within Psest_1352 at 1464.047 kb on + strand, within Psest_1352 at 1464.047 kb on + strand, within Psest_1352 at 1464.048 kb on - strand, within Psest_1352 at 1464.048 kb on - strand, within Psest_1352 at 1464.048 kb on - strand, within Psest_1352 at 1464.048 kb on - strand, within Psest_1352 at 1464.048 kb on - strand, within Psest_1352 at 1464.048 kb on - strand, within Psest_1352 at 1464.099 kb on + strand, within Psest_1352 at 1464.171 kb on + strand, within Psest_1352 at 1464.171 kb on + strand, within Psest_1352 at 1464.172 kb on - strand, within Psest_1352 at 1464.172 kb on - strand, within Psest_1352 at 1464.172 kb on - strand, within Psest_1352 at 1464.172 kb on - strand, within Psest_1352 at 1464.288 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.802 kb on + strand, within Psest_1352 at 1464.803 kb on - strand, within Psest_1352 at 1464.993 kb on + strand at 1465.288 kb on + strand, within Psest_1353 at 1465.350 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.427 kb on - strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.435 kb on + strand, within Psest_1353 at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.471 kb on - strand at 1465.471 kb on - strand at 1465.471 kb on - strand at 1465.806 kb on + strand, within Psest_1354 at 1465.807 kb on - strand, within Psest_1354
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 1,462,988 + Psest_1351 0.68 -2.9 1,463,147 - Psest_1351 0.78 +0.2 1,463,147 - Psest_1351 0.78 +1.5 1,463,147 - Psest_1351 0.78 -1.2 1,463,189 + Psest_1351 0.80 -0.0 1,463,329 + Psest_1351 0.89 +1.1 1,463,329 + Psest_1351 0.89 -1.0 1,463,329 + Psest_1351 0.89 +1.2 1,463,505 + -1.6 1,463,505 + -0.3 1,463,505 + +0.2 1,463,505 + +0.3 1,463,505 + +0.9 1,463,506 - -1.8 1,463,506 - -0.5 1,463,506 - -3.3 1,463,506 - +0.7 1,463,506 - +1.5 1,463,506 - +1.5 1,463,506 - -0.6 1,463,506 - -1.2 1,463,506 - +0.4 1,463,506 - +1.6 1,463,692 + +0.4 1,463,693 - +0.8 1,463,766 + +0.7 1,463,766 + -1.0 1,463,767 - -0.2 1,463,935 - Psest_1352 0.15 -0.6 1,463,935 - Psest_1352 0.15 -0.9 1,463,935 - Psest_1352 0.15 -0.9 1,463,935 - Psest_1352 0.15 +0.5 1,463,952 + Psest_1352 0.17 +0.7 1,463,952 + Psest_1352 0.17 -2.8 1,463,953 - Psest_1352 0.17 -0.6 1,463,953 - Psest_1352 0.17 +0.5 1,463,967 + Psest_1352 0.18 -1.4 1,463,968 - Psest_1352 0.18 -0.6 1,463,968 - Psest_1352 0.18 -2.6 1,463,968 - Psest_1352 0.18 +2.0 1,463,968 - Psest_1352 0.18 +1.2 1,463,993 + Psest_1352 0.20 +0.4 1,463,994 - Psest_1352 0.20 +1.4 1,464,039 + Psest_1352 0.24 -0.8 1,464,039 + Psest_1352 0.24 -0.8 1,464,040 - Psest_1352 0.24 +0.4 1,464,047 + Psest_1352 0.25 -0.8 1,464,047 + Psest_1352 0.25 -0.5 1,464,047 + Psest_1352 0.25 -3.6 1,464,048 - Psest_1352 0.25 -0.7 1,464,048 - Psest_1352 0.25 -0.7 1,464,048 - Psest_1352 0.25 +2.4 1,464,048 - Psest_1352 0.25 -0.1 1,464,048 - Psest_1352 0.25 +1.9 1,464,048 - Psest_1352 0.25 +0.0 1,464,099 + Psest_1352 0.29 -0.6 1,464,171 + Psest_1352 0.35 -0.7 1,464,171 + Psest_1352 0.35 +2.6 1,464,172 - Psest_1352 0.35 +2.9 1,464,172 - Psest_1352 0.35 +2.0 1,464,172 - Psest_1352 0.35 -0.1 1,464,172 - Psest_1352 0.35 +3.0 1,464,288 + Psest_1352 0.45 -1.6 1,464,552 + Psest_1352 0.68 +1.4 1,464,552 + Psest_1352 0.68 -3.3 1,464,552 + Psest_1352 0.68 +1.8 1,464,552 + Psest_1352 0.68 -1.3 1,464,552 + Psest_1352 0.68 -0.2 1,464,552 + Psest_1352 0.68 +1.4 1,464,552 + Psest_1352 0.68 -0.1 1,464,552 + Psest_1352 0.68 +1.1 1,464,552 + Psest_1352 0.68 +1.1 1,464,553 - Psest_1352 0.68 +0.2 1,464,553 - Psest_1352 0.68 +0.4 1,464,553 - Psest_1352 0.68 +1.9 1,464,553 - Psest_1352 0.68 +1.4 1,464,553 - Psest_1352 0.68 +0.7 1,464,553 - Psest_1352 0.68 +2.3 1,464,802 + Psest_1352 0.90 +1.0 1,464,803 - Psest_1352 0.90 +2.4 1,464,993 + -0.5 1,465,288 + Psest_1353 0.53 +1.4 1,465,350 + Psest_1353 0.67 +0.1 1,465,426 + Psest_1353 0.85 -0.3 1,465,426 + Psest_1353 0.85 +0.8 1,465,426 + Psest_1353 0.85 -2.6 1,465,426 + Psest_1353 0.85 -2.0 1,465,426 + Psest_1353 0.85 -0.8 1,465,426 + Psest_1353 0.85 +0.4 1,465,427 - Psest_1353 0.86 +1.9 1,465,428 + Psest_1353 0.86 -0.7 1,465,428 + Psest_1353 0.86 -2.3 1,465,428 + Psest_1353 0.86 -0.8 1,465,429 - Psest_1353 0.86 -1.9 1,465,429 - Psest_1353 0.86 -2.6 1,465,429 - Psest_1353 0.86 +0.2 1,465,429 - Psest_1353 0.86 -0.3 1,465,435 + Psest_1353 0.88 -0.9 1,465,470 + -2.6 1,465,470 + +0.7 1,465,470 + -2.1 1,465,470 + -0.6 1,465,470 + +0.3 1,465,470 + +0.3 1,465,470 + -0.6 1,465,471 - -1.7 1,465,471 - +0.9 1,465,471 - +0.1 1,465,806 + Psest_1354 0.72 -0.8 1,465,807 - Psest_1354 0.72 -2.3
Or see this region's nucleotide sequence