Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2466

Experiment: Time16-nophage

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time16-nophage
2,795,101	+		Pf1N1B4_2464	0.74	+0.7
2,795,101	+		Pf1N1B4_2464	0.74	+2.0
2,795,272	+				-0.8
2,795,272	+				+0.4
2,795,273	-				-0.2
2,795,273	-				-0.6
2,795,273	-				-0.3
2,795,273	-				+0.5
2,795,273	-				-0.0
2,795,276	+				-0.8
2,795,371	-		Pf1N1B4_2465	0.11	-1.1
2,795,584	+		Pf1N1B4_2465	0.43	-0.3
2,795,584	+		Pf1N1B4_2465	0.43	-1.4
2,795,719	+		Pf1N1B4_2465	0.63	-1.5
2,795,719	+		Pf1N1B4_2465	0.63	-0.7
2,795,953	+				-0.7
2,795,954	-				+0.8
2,795,954	-				+0.3
2,796,003	+				-0.5
2,796,003	+				+1.4
2,796,003	+				+0.8
2,796,003	+				+0.4
2,796,003	+				-0.4
2,796,004	-				+0.4
2,796,004	-				-0.1
2,796,004	-				-0.4
2,796,192	+		Pf1N1B4_2466	0.15	-1.2
2,796,218	+		Pf1N1B4_2466	0.17	+0.3
2,796,218	+		Pf1N1B4_2466	0.17	+0.5
2,796,219	-		Pf1N1B4_2466	0.17	+0.4
2,796,219	-		Pf1N1B4_2466	0.17	-0.7
2,796,219	-		Pf1N1B4_2466	0.17	-0.2
2,796,254	+		Pf1N1B4_2466	0.20	-0.1
2,796,258	+		Pf1N1B4_2466	0.20	+1.0
2,796,258	+		Pf1N1B4_2466	0.20	-0.7
2,796,258	+		Pf1N1B4_2466	0.20	-0.2
2,796,259	-		Pf1N1B4_2466	0.20	-0.1
2,796,259	-		Pf1N1B4_2466	0.20	-0.3
2,796,259	-		Pf1N1B4_2466	0.20	-0.7
2,796,321	+		Pf1N1B4_2466	0.24	+0.1
2,796,342	+		Pf1N1B4_2466	0.26	-0.3
2,796,343	-		Pf1N1B4_2466	0.26	+0.1
2,796,363	+		Pf1N1B4_2466	0.27	+0.7
2,796,364	-		Pf1N1B4_2466	0.27	+1.1
2,796,498	+		Pf1N1B4_2466	0.37	+0.7
2,796,498	+		Pf1N1B4_2466	0.37	-0.0
2,796,498	+		Pf1N1B4_2466	0.37	-0.0
2,796,498	+		Pf1N1B4_2466	0.37	-0.5
2,796,498	+		Pf1N1B4_2466	0.37	-0.2
2,796,499	-		Pf1N1B4_2466	0.37	-0.3
2,796,531	+		Pf1N1B4_2466	0.39	+0.5
2,796,531	+		Pf1N1B4_2466	0.39	-0.1
2,796,619	-		Pf1N1B4_2466	0.45	+0.8
2,796,619	-		Pf1N1B4_2466	0.45	-0.4
2,796,747	+		Pf1N1B4_2466	0.54	-0.9
2,796,748	-		Pf1N1B4_2466	0.54	+1.7
2,796,751	+		Pf1N1B4_2466	0.54	+0.4
2,796,751	+		Pf1N1B4_2466	0.54	-0.3
2,796,751	+		Pf1N1B4_2466	0.54	-0.5
2,796,751	+		Pf1N1B4_2466	0.54	-0.2
2,796,751	+		Pf1N1B4_2466	0.54	-1.5
2,796,751	+		Pf1N1B4_2466	0.54	-1.2
2,796,751	+				-0.3
2,796,751	+		Pf1N1B4_2466	0.54	-0.0
2,796,751	+		Pf1N1B4_2466	0.54	-1.4
2,796,751	+		Pf1N1B4_2466	0.54	+0.0
2,796,751	+		Pf1N1B4_2466	0.54	+0.9
2,796,751	+		Pf1N1B4_2466	0.54	+0.5
2,796,752	-		Pf1N1B4_2466	0.54	-1.9
2,796,752	-		Pf1N1B4_2466	0.54	-1.1
2,796,752	-		Pf1N1B4_2466	0.54	-0.4
2,796,752	-		Pf1N1B4_2466	0.54	+1.7
2,796,752	-		Pf1N1B4_2466	0.54	-1.9
2,796,752	-		Pf1N1B4_2466	0.54	-1.8
2,796,752	-		Pf1N1B4_2466	0.54	-0.6
2,796,752	-				+0.8
2,796,811	+		Pf1N1B4_2466	0.58	+1.0
2,796,812	-		Pf1N1B4_2466	0.59	-0.2
2,796,812	-		Pf1N1B4_2466	0.59	+0.1
2,796,985	+				-0.5
2,796,985	+		Pf1N1B4_2466	0.71	-0.3
2,796,985	+		Pf1N1B4_2466	0.71	-0.3
2,796,985	+		Pf1N1B4_2466	0.71	-0.2
2,796,985	+				+1.8
2,796,986	-		Pf1N1B4_2466	0.71	-0.3
2,796,986	-		Pf1N1B4_2466	0.71	-0.2
2,797,218	+		Pf1N1B4_2466	0.87	+0.4
2,797,218	+		Pf1N1B4_2466	0.87	-0.2
2,797,218	+		Pf1N1B4_2466	0.87	-1.5
2,797,219	-		Pf1N1B4_2466	0.87	+0.8
2,797,219	-		Pf1N1B4_2466	0.87	+0.7
2,797,219	-		Pf1N1B4_2466	0.87	+0.4
2,797,277	+				+1.1
2,797,298	+				+0.4
2,797,299	-				-0.9
2,797,367	-				+0.8
2,797,453	-				-1.0
2,797,519	-		Pf1N1B4_2467	0.11	+0.2
2,797,519	-		Pf1N1B4_2467	0.11	-0.4
2,797,543	+		Pf1N1B4_2467	0.13	-0.3
2,797,543	+		Pf1N1B4_2467	0.13	-0.5
2,797,543	+		Pf1N1B4_2467	0.13	+0.8
2,797,545	+				-0.9
2,797,545	+		Pf1N1B4_2467	0.14	+0.4
2,797,546	-		Pf1N1B4_2467	0.14	-1.4
2,797,546	-		Pf1N1B4_2467	0.14	+0.4
2,797,546	-		Pf1N1B4_2467	0.14	+1.4
2,797,546	-		Pf1N1B4_2467	0.14	-0.6
2,797,563	+		Pf1N1B4_2467	0.15	-0.5
2,797,564	-		Pf1N1B4_2467	0.15	+0.8
2,797,596	-		Pf1N1B4_2467	0.19	-1.4
2,797,596	-		Pf1N1B4_2467	0.19	-0.8
2,797,596	-		Pf1N1B4_2467	0.19	-0.2
2,797,601	+		Pf1N1B4_2467	0.19	+1.1
2,797,601	+		Pf1N1B4_2467	0.19	-0.4
2,797,601	+		Pf1N1B4_2467	0.19	-0.4
2,797,601	+		Pf1N1B4_2467	0.19	+1.4
2,797,601	+		Pf1N1B4_2467	0.19	+0.5
2,797,601	+		Pf1N1B4_2467	0.19	-0.4
2,797,602	-		Pf1N1B4_2467	0.19	-0.0
2,797,602	-		Pf1N1B4_2467	0.19	+0.8
2,797,602	-		Pf1N1B4_2467	0.19	-1.6
2,797,602	-		Pf1N1B4_2467	0.19	-0.1
2,797,602	-		Pf1N1B4_2467	0.19	-0.0
2,797,602	-		Pf1N1B4_2467	0.19	+0.7
2,797,602	-		Pf1N1B4_2467	0.19	-0.8
2,797,617	+		Pf1N1B4_2467	0.21	-0.4
2,797,618	-		Pf1N1B4_2467	0.21	-0.1
2,797,641	+		Pf1N1B4_2467	0.23	-1.8
2,797,641	+		Pf1N1B4_2467	0.23	+0.1
2,797,641	+		Pf1N1B4_2467	0.23	-0.9
2,797,641	+		Pf1N1B4_2467	0.23	-0.3
2,797,642	-		Pf1N1B4_2467	0.23	+0.6
2,797,642	-		Pf1N1B4_2467	0.23	-0.2
2,797,642	-		Pf1N1B4_2467	0.23	-1.4
2,797,645	+		Pf1N1B4_2467	0.23	-0.9
2,797,645	+		Pf1N1B4_2467	0.23	-1.2
2,797,645	+		Pf1N1B4_2467	0.23	+0.2
2,797,646	-		Pf1N1B4_2467	0.24	-1.2
2,797,646	-		Pf1N1B4_2467	0.24	-1.9
2,797,649	+		Pf1N1B4_2467	0.24	-0.6
2,797,649	+		Pf1N1B4_2467	0.24	-0.2
2,797,688	-		Pf1N1B4_2467	0.28	+0.4
2,797,729	+		Pf1N1B4_2467	0.32	+0.4
2,797,729	+		Pf1N1B4_2467	0.32	-0.9
2,797,730	-		Pf1N1B4_2467	0.32	-0.2
2,797,732	+		Pf1N1B4_2467	0.32	-0.9
2,797,733	-		Pf1N1B4_2467	0.32	-0.1
2,797,756	+		Pf1N1B4_2467	0.34	-0.2
2,797,757	-		Pf1N1B4_2467	0.35	-0.3
2,797,844	+		Pf1N1B4_2467	0.43	-0.4
2,797,880	+		Pf1N1B4_2467	0.47	+1.0
2,797,880	+		Pf1N1B4_2467	0.47	+1.2
2,797,880	+		Pf1N1B4_2467	0.47	+0.4
2,797,880	+		Pf1N1B4_2467	0.47	-0.5
2,797,880	+		Pf1N1B4_2467	0.47	+2.4
2,797,881	-				+0.8
2,797,881	-		Pf1N1B4_2467	0.47	-0.1
2,797,960	+		Pf1N1B4_2467	0.55	+0.3
2,797,980	-		Pf1N1B4_2467	0.57	-0.6
2,798,050	+		Pf1N1B4_2467	0.64	-0.1
2,798,050	+		Pf1N1B4_2467	0.64	+0.6
2,798,123	+				-0.6
2,798,124	-		Pf1N1B4_2467	0.71	+1.4
2,798,124	-		Pf1N1B4_2467	0.71	-1.3
2,798,153	+		Pf1N1B4_2467	0.74	-0.8
2,798,153	+		Pf1N1B4_2467	0.74	-0.3
2,798,153	+		Pf1N1B4_2467	0.74	-0.1
2,798,154	-		Pf1N1B4_2467	0.74	-1.1
2,798,154	-		Pf1N1B4_2467	0.74	+0.4
2,798,154	-		Pf1N1B4_2467	0.74	+0.1
2,798,154	-		Pf1N1B4_2467	0.74	-0.5
2,798,243	+		Pf1N1B4_2467	0.83	-0.6