Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10370

Experiment: 4E-T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4E-T2
2,284,715	-		LRK54_RS10365	0.57	-1.8
2,285,316	+				-0.4
2,285,316	+				-1.5
2,285,316	+				+0.1
2,285,316	+				-1.2
2,285,316	+				-1.5
2,285,316	+				+1.1
2,285,316	+				-2.5
2,285,316	+				-2.2
2,285,316	+				-0.0
2,285,317	-				-1.1
2,285,317	-				-0.7
2,285,317	-				+0.2
2,285,317	-				-1.5
2,285,317	-				+0.1
2,285,317	-				-2.4
2,285,350	+				+0.1
2,285,350	+				+0.1
2,285,350	+				-0.3
2,285,350	+				-0.5
2,285,350	+				-1.2
2,285,350	+				-0.5
2,285,350	+				-0.7
2,285,350	+				-0.4
2,285,350	+				-1.2
2,285,350	+				+1.1
2,285,350	+				+0.3
2,285,351	-				-0.9
2,285,351	-				-0.9
2,285,351	-				-0.1
2,285,351	-				-1.7
2,285,351	-				+0.1
2,285,351	-				+0.1
2,285,351	-				-1.7
2,285,351	-				+0.1
2,285,476	+				-1.0
2,285,476	+				+0.1
2,285,476	+				-1.0
2,285,476	+				+0.1
2,285,476	+				-0.5
2,285,477	-				-1.8
2,285,477	-				+0.1
2,285,477	-				-1.2
2,285,604	+				-1.7
2,285,604	+				-0.5
2,285,604	+				-0.2
2,285,604	+				-1.5
2,285,604	+				+1.1
2,285,604	+				+0.9
2,285,604	+				+0.1
2,285,604	+				+1.5
2,285,604	+				+1.1
2,285,604	+				-0.5
2,285,605	-				-1.9
2,285,605	-				-0.9
2,285,605	-				-0.1
2,285,605	-				+0.1
2,285,605	-				+0.3
2,285,605	-				-1.9
2,285,605	-				-0.5
2,285,605	-				-1.2
2,285,863	+		LRK54_RS10370	0.32	-1.1
2,285,863	+		LRK54_RS10370	0.32	-1.0
2,285,863	+		LRK54_RS10370	0.32	+0.1
2,285,863	+		LRK54_RS10370	0.32	-0.7
2,285,863	+		LRK54_RS10370	0.32	-0.2
2,285,863	+		LRK54_RS10370	0.32	-0.5
2,285,863	+		LRK54_RS10370	0.32	-1.5
2,285,864	-		LRK54_RS10370	0.32	-1.2
2,285,864	-		LRK54_RS10370	0.32	-0.5
2,285,884	+		LRK54_RS10370	0.34	-0.4
2,285,884	+		LRK54_RS10370	0.34	-0.5
2,285,884	+		LRK54_RS10370	0.34	+1.1
2,285,884	+		LRK54_RS10370	0.34	+1.1
2,285,884	+		LRK54_RS10370	0.34	-2.7
2,285,884	+		LRK54_RS10370	0.34	+1.1
2,285,884	+		LRK54_RS10370	0.34	+0.1
2,285,884	+		LRK54_RS10370	0.34	-0.5
2,285,884	+		LRK54_RS10370	0.34	-1.1
2,285,884	+		LRK54_RS10370	0.34	-0.3
2,285,884	+		LRK54_RS10370	0.34	+0.1
2,285,884	+		LRK54_RS10370	0.34	-0.2
2,285,884	+		LRK54_RS10370	0.34	-1.0
2,285,884	+		LRK54_RS10370	0.34	-0.8
2,285,884	+		LRK54_RS10370	0.34	+0.1
2,285,884	+		LRK54_RS10370	0.34	-1.7
2,285,884	+		LRK54_RS10370	0.34	-1.7
2,285,884	+		LRK54_RS10370	0.34	+0.1
2,285,885	-		LRK54_RS10370	0.34	-0.5
2,285,885	-		LRK54_RS10370	0.34	-0.3
2,285,885	-		LRK54_RS10370	0.34	+0.7
2,285,885	-		LRK54_RS10370	0.34	+0.0
2,285,885	-		LRK54_RS10370	0.34	-0.0
2,285,885	-		LRK54_RS10370	0.34	-0.2
2,285,885	-		LRK54_RS10370	0.34	+0.1
2,285,885	-		LRK54_RS10370	0.34	-2.7
2,285,885	-		LRK54_RS10370	0.34	-1.2
2,285,885	-		LRK54_RS10370	0.34	-0.3
2,285,885	-		LRK54_RS10370	0.34	+0.9
2,285,885	-		LRK54_RS10370	0.34	-0.7
2,285,885	-		LRK54_RS10370	0.34	-0.5
2,285,885	-		LRK54_RS10370	0.34	+1.1
2,285,923	+		LRK54_RS10370	0.39	-0.5
2,285,923	+		LRK54_RS10370	0.39	-1.1
2,285,923	+		LRK54_RS10370	0.39	-0.1
2,285,923	+		LRK54_RS10370	0.39	-1.0
2,285,923	+		LRK54_RS10370	0.39	+0.3
2,285,923	+		LRK54_RS10370	0.39	-0.9
2,285,923	+		LRK54_RS10370	0.39	+0.8
2,285,923	+		LRK54_RS10370	0.39	-1.5
2,285,923	+		LRK54_RS10370	0.39	+0.3
2,285,923	+		LRK54_RS10370	0.39	-0.5
2,285,923	+		LRK54_RS10370	0.39	-1.0
2,285,923	+		LRK54_RS10370	0.39	-0.9
2,285,923	+		LRK54_RS10370	0.39	+1.4
2,285,923	+		LRK54_RS10370	0.39	-0.2
2,285,923	+		LRK54_RS10370	0.39	-0.9
2,285,923	+		LRK54_RS10370	0.39	-0.6
2,285,923	+		LRK54_RS10370	0.39	-1.1
2,285,923	+		LRK54_RS10370	0.39	-1.7
2,285,923	+		LRK54_RS10370	0.39	+0.1
2,285,923	+		LRK54_RS10370	0.39	-0.7
2,285,923	+		LRK54_RS10370	0.39	+1.1
2,285,923	+		LRK54_RS10370	0.39	-0.9
2,285,923	+		LRK54_RS10370	0.39	+1.1
2,285,923	+		LRK54_RS10370	0.39	-0.2
2,285,923	+		LRK54_RS10370	0.39	-0.6
2,285,923	+		LRK54_RS10370	0.39	-0.6
2,285,923	+		LRK54_RS10370	0.39	+0.1
2,285,923	+		LRK54_RS10370	0.39	+0.8
2,285,923	+		LRK54_RS10370	0.39	+0.1
2,285,923	+		LRK54_RS10370	0.39	-0.2
2,285,923	+		LRK54_RS10370	0.39	-0.6
2,285,923	+		LRK54_RS10370	0.39	-1.6
2,285,923	+		LRK54_RS10370	0.39	-1.2
2,285,923	+		LRK54_RS10370	0.39	+0.5
2,285,923	+		LRK54_RS10370	0.39	+1.1
2,285,923	+		LRK54_RS10370	0.39	+1.1
2,285,924	-		LRK54_RS10370	0.40	-2.1
2,285,924	-		LRK54_RS10370	0.40	+1.7
2,285,924	-		LRK54_RS10370	0.40	+0.1
2,285,924	-		LRK54_RS10370	0.40	+1.1
2,285,924	-		LRK54_RS10370	0.40	+1.1
2,285,924	-		LRK54_RS10370	0.40	-0.6
2,285,924	-		LRK54_RS10370	0.40	-2.4
2,285,924	-		LRK54_RS10370	0.40	-1.4
2,285,924	-		LRK54_RS10370	0.40	-2.4
2,285,924	-		LRK54_RS10370	0.40	-1.6
2,285,924	-		LRK54_RS10370	0.40	-2.2
2,285,924	-		LRK54_RS10370	0.40	-0.9
2,285,924	-		LRK54_RS10370	0.40	-1.5
2,285,924	-		LRK54_RS10370	0.40	+0.8
2,285,924	-		LRK54_RS10370	0.40	+0.1
2,285,924	-		LRK54_RS10370	0.40	-0.5
2,285,924	-		LRK54_RS10370	0.40	+1.1
2,285,924	-		LRK54_RS10370	0.40	-2.1
2,285,924	-		LRK54_RS10370	0.40	+1.1
2,285,924	-		LRK54_RS10370	0.40	-0.9
2,285,924	-		LRK54_RS10370	0.40	+0.9
2,285,924	-		LRK54_RS10370	0.40	+1.7
2,285,924	-		LRK54_RS10370	0.40	-0.8
2,285,924	-		LRK54_RS10370	0.40	-0.7
2,285,924	-		LRK54_RS10370	0.40	-1.1
2,285,924	-		LRK54_RS10370	0.40	+2.1
2,285,924	-		LRK54_RS10370	0.40	+0.6
2,285,924	-		LRK54_RS10370	0.40	-0.4
2,285,924	-		LRK54_RS10370	0.40	-2.6
2,285,924	-		LRK54_RS10370	0.40	-0.8
2,285,924	-		LRK54_RS10370	0.40	-1.0
2,285,950	+		LRK54_RS10370	0.43	-0.3
2,285,950	+		LRK54_RS10370	0.43	-0.6
2,285,950	+		LRK54_RS10370	0.43	+1.1
2,285,950	+		LRK54_RS10370	0.43	-0.4
2,285,950	+		LRK54_RS10370	0.43	+0.1
2,285,950	+		LRK54_RS10370	0.43	-0.5
2,285,951	-		LRK54_RS10370	0.43	+0.5
2,285,951	-		LRK54_RS10370	0.43	+0.1
2,285,971	+		LRK54_RS10370	0.46	-0.5
2,285,972	-		LRK54_RS10370	0.46	-0.5
2,285,972	-		LRK54_RS10370	0.46	+1.5
2,285,972	-		LRK54_RS10370	0.46	-0.4
2,285,972	-		LRK54_RS10370	0.46	-1.5
2,285,996	-		LRK54_RS10370	0.49	-2.1
2,286,083	+		LRK54_RS10370	0.60	-1.5
2,286,084	-		LRK54_RS10370	0.60	-1.6
2,286,084	-		LRK54_RS10370	0.60	+0.3
2,286,084	-		LRK54_RS10370	0.60	-1.2
2,286,084	-		LRK54_RS10370	0.60	-1.5
2,286,160	+		LRK54_RS10370	0.70	+0.4
2,286,160	+		LRK54_RS10370	0.70	-0.9
2,286,160	+		LRK54_RS10370	0.70	+0.7
2,286,160	+		LRK54_RS10370	0.70	-0.2
2,286,160	+		LRK54_RS10370	0.70	-0.5
2,286,160	+		LRK54_RS10370	0.70	-1.4
2,286,160	+		LRK54_RS10370	0.70	-1.1
2,286,160	+		LRK54_RS10370	0.70	-0.5
2,286,161	-		LRK54_RS10370	0.70	-0.9
2,286,161	-		LRK54_RS10370	0.70	-0.8
2,286,161	-		LRK54_RS10370	0.70	-1.9
2,286,161	-		LRK54_RS10370	0.70	+0.1
2,286,161	-		LRK54_RS10370	0.70	-0.8
2,286,166	+		LRK54_RS10370	0.71	+0.1
2,286,166	+		LRK54_RS10370	0.71	-1.7
2,286,166	+		LRK54_RS10370	0.71	-1.2
2,286,166	+		LRK54_RS10370	0.71	-1.7
2,286,166	+		LRK54_RS10370	0.71	-1.5
2,286,166	+		LRK54_RS10370	0.71	-0.5
2,286,166	+		LRK54_RS10370	0.71	+1.1
2,286,166	+		LRK54_RS10370	0.71	-1.5
2,286,166	+		LRK54_RS10370	0.71	-0.5
2,286,167	-		LRK54_RS10370	0.71	-0.7
2,286,167	-		LRK54_RS10370	0.71	-1.2
2,286,167	-		LRK54_RS10370	0.71	-0.6
2,286,167	-		LRK54_RS10370	0.71	-0.5
2,286,223	+		LRK54_RS10370	0.78	+0.1
2,286,223	+		LRK54_RS10370	0.78	-0.7
2,286,223	+		LRK54_RS10370	0.78	+0.7
2,286,223	+		LRK54_RS10370	0.78	-1.5
2,286,223	+		LRK54_RS10370	0.78	-2.0
2,286,223	+		LRK54_RS10370	0.78	-1.5
2,286,224	-		LRK54_RS10370	0.78	+0.1
2,286,224	-		LRK54_RS10370	0.78	-1.5
2,286,224	-		LRK54_RS10370	0.78	-0.3
2,286,236	+		LRK54_RS10370	0.80	-0.5
2,286,236	+		LRK54_RS10370	0.80	-1.5
2,286,236	+		LRK54_RS10370	0.80	-1.7
2,286,237	-		LRK54_RS10370	0.80	+2.7
2,286,237	-		LRK54_RS10370	0.80	+1.7
2,286,237	-		LRK54_RS10370	0.80	+1.5
2,286,237	-		LRK54_RS10370	0.80	-2.0
2,286,237	-		LRK54_RS10370	0.80	+0.1
2,286,237	-		LRK54_RS10370	0.80	-2.3
2,286,237	-		LRK54_RS10370	0.80	-0.5
2,286,237	-		LRK54_RS10370	0.80	-0.5
2,286,456	+				+1.1
2,286,456	+				-0.2
2,286,456	+				-2.1
2,286,456	+				-1.2
2,286,456	+				-1.5
2,286,456	+				-1.6
2,286,456	+				+3.4
2,286,456	+				-1.5
2,286,456	+				+0.7
2,286,456	+				-0.5
2,286,457	-				-1.4
2,286,457	-				-1.2
2,286,457	-				+0.1
2,286,457	-				+1.1
2,286,457	-				-0.5
2,286,457	-				-0.5
2,286,457	-				-1.2
2,286,457	-				-0.5
2,286,457	-				-1.5
2,286,549	+		LRK54_RS10375	0.12	+1.1
2,286,549	+		LRK54_RS10375	0.12	-1.0
2,286,549	+		LRK54_RS10375	0.12	-0.2
2,286,549	+		LRK54_RS10375	0.12	-1.6
2,286,549	+		LRK54_RS10375	0.12	-1.2
2,286,549	+		LRK54_RS10375	0.12	-0.2
2,286,549	+		LRK54_RS10375	0.12	-2.4
2,286,550	-		LRK54_RS10375	0.12	+0.7
2,286,550	-		LRK54_RS10375	0.12	+0.1
2,286,550	-		LRK54_RS10375	0.12	-0.1
2,286,550	-		LRK54_RS10375	0.12	-0.9
2,286,606	+		LRK54_RS10375	0.17	+0.1
2,286,606	+		LRK54_RS10375	0.17	-2.5
2,286,607	-		LRK54_RS10375	0.17	-0.4
2,286,756	+		LRK54_RS10375	0.29	+1.1
2,286,756	+		LRK54_RS10375	0.29	+0.6
2,286,757	-		LRK54_RS10375	0.29	-0.3
2,286,757	-		LRK54_RS10375	0.29	+1.1
2,286,771	+		LRK54_RS10375	0.30	+0.8
2,286,771	+		LRK54_RS10375	0.30	-1.9
2,286,771	+		LRK54_RS10375	0.30	-0.2
2,286,771	+		LRK54_RS10375	0.30	+0.5
2,286,771	+		LRK54_RS10375	0.30	-1.9
2,286,771	+		LRK54_RS10375	0.30	-2.8
2,286,771	+		LRK54_RS10375	0.30	-0.5
2,286,772	-		LRK54_RS10375	0.30	+1.1
2,286,772	-		LRK54_RS10375	0.30	+2.1
2,286,772	-		LRK54_RS10375	0.30	-0.5
2,286,772	-		LRK54_RS10375	0.30	+2.7
2,286,772	-		LRK54_RS10375	0.30	-1.2
2,286,772	-		LRK54_RS10375	0.30	-1.7
2,286,772	-		LRK54_RS10375	0.30	+0.5
2,286,772	-		LRK54_RS10375	0.30	+1.1
2,286,772	-		LRK54_RS10375	0.30	-2.2
2,286,772	-		LRK54_RS10375	0.30	-1.7
2,286,772	-		LRK54_RS10375	0.30	-1.3
2,286,822	+		LRK54_RS10375	0.34	-2.1
2,286,823	-		LRK54_RS10375	0.34	-0.5
2,286,823	-		LRK54_RS10375	0.34	-0.3
2,286,823	-		LRK54_RS10375	0.34	-1.2
2,286,823	-		LRK54_RS10375	0.34	+0.1
2,286,823	-		LRK54_RS10375	0.34	+0.2
2,286,882	+		LRK54_RS10375	0.38	+1.1
2,286,882	+		LRK54_RS10375	0.38	+0.1
2,286,883	-		LRK54_RS10375	0.38	-1.2
2,286,883	-		LRK54_RS10375	0.38	-1.5
2,286,883	-		LRK54_RS10375	0.38	-2.8
2,286,883	-		LRK54_RS10375	0.38	+1.1
2,286,883	-		LRK54_RS10375	0.38	+0.1
2,286,921	+		LRK54_RS10375	0.41	+0.1
2,286,921	+		LRK54_RS10375	0.41	-0.9
2,286,921	+		LRK54_RS10375	0.41	-0.5
2,286,921	+		LRK54_RS10375	0.41	+0.5
2,286,921	+		LRK54_RS10375	0.41	-0.5
2,286,921	+		LRK54_RS10375	0.41	-0.2
2,286,921	+		LRK54_RS10375	0.41	+1.1
2,286,921	+		LRK54_RS10375	0.41	+1.5
2,286,921	+		LRK54_RS10375	0.41	-0.6
2,286,921	+		LRK54_RS10375	0.41	+1.1
2,286,921	+		LRK54_RS10375	0.41	-0.6
2,286,921	+		LRK54_RS10375	0.41	-0.2
2,286,921	+		LRK54_RS10375	0.41	+1.1
2,286,922	-		LRK54_RS10375	0.41	-1.2
2,286,922	-		LRK54_RS10375	0.41	-0.5
2,286,922	-		LRK54_RS10375	0.41	+0.1
2,286,922	-		LRK54_RS10375	0.41	-0.0
2,286,922	-		LRK54_RS10375	0.41	+0.1
2,286,922	-		LRK54_RS10375	0.41	+0.2
2,286,922	-		LRK54_RS10375	0.41	-3.1
2,286,922	-		LRK54_RS10375	0.41	+0.4
2,286,922	-		LRK54_RS10375	0.41	+1.1
2,286,940	-		LRK54_RS10375	0.43	-0.9
2,286,985	-		LRK54_RS10375	0.46	-1.7
2,287,098	+		LRK54_RS10375	0.55	+1.1
2,287,098	+		LRK54_RS10375	0.55	-1.7
2,287,099	-		LRK54_RS10375	0.55	+0.6
2,287,278	+		LRK54_RS10375	0.69	+2.1
2,287,278	+		LRK54_RS10375	0.69	-0.5
2,287,278	+		LRK54_RS10375	0.69	-0.1
2,287,278	+		LRK54_RS10375	0.69	+2.4
2,287,278	+		LRK54_RS10375	0.69	+1.1
2,287,279	-		LRK54_RS10375	0.69	-0.2
2,287,279	-		LRK54_RS10375	0.69	-0.7
2,287,279	-		LRK54_RS10375	0.69	-0.5
2,287,279	-		LRK54_RS10375	0.69	+0.1
2,287,279	-		LRK54_RS10375	0.69	+1.1
2,287,279	-		LRK54_RS10375	0.69	-0.3
2,287,362	+		LRK54_RS10375	0.76	+0.1
2,287,363	-		LRK54_RS10375	0.76	+1.1
2,287,363	-		LRK54_RS10375	0.76	-0.9
2,287,363	-		LRK54_RS10375	0.76	+0.1
2,287,363	-		LRK54_RS10375	0.76	+0.1
2,287,363	-		LRK54_RS10375	0.76	-0.5