Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS14160

Experiment: 3E-T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3E-T2
3,155,513	+				+1.3
3,155,513	+				+0.2
3,155,513	+				-1.3
3,155,513	+				+0.0
3,155,513	+				-2.1
3,155,513	+				-0.7
3,155,514	-				+0.3
3,155,514	-				+0.1
3,155,514	-				-1.3
3,155,514	-				+0.3
3,155,514	-				-1.0
3,155,514	-				-1.0
3,155,514	-				+0.0
3,155,514	-				+1.3
3,155,514	-				+0.3
3,155,514	-				-1.7
3,155,514	-				-0.7
3,155,514	-				+0.3
3,155,853	+		LRK54_RS14155	0.67	-0.7
3,155,853	+		LRK54_RS14155	0.67	-1.5
3,155,854	-		LRK54_RS14155	0.68	-0.8
3,155,854	-		LRK54_RS14155	0.68	+1.1
3,155,922	+		LRK54_RS14155	0.84	-1.3
3,155,922	+		LRK54_RS14155	0.84	+0.7
3,155,922	+		LRK54_RS14155	0.84	+1.3
3,155,922	+		LRK54_RS14155	0.84	-0.3
3,155,922	+		LRK54_RS14155	0.84	+0.3
3,155,923	-		LRK54_RS14155	0.84	-2.3
3,156,525	+		LRK54_RS14160	0.85	-1.0
3,156,525	+		LRK54_RS14160	0.85	+1.3
3,156,525	+		LRK54_RS14160	0.85	-0.7
3,156,525	+		LRK54_RS14160	0.85	-1.1
3,156,525	+		LRK54_RS14160	0.85	+0.3
3,156,526	-		LRK54_RS14160	0.85	+0.5
3,156,526	-		LRK54_RS14160	0.85	+0.8
3,156,526	-		LRK54_RS14160	0.85	+1.3
3,156,526	-		LRK54_RS14160	0.85	-0.2
3,156,526	-		LRK54_RS14160	0.85	-0.2
3,156,526	-		LRK54_RS14160	0.85	-0.1
3,156,603	+				-2.0
3,156,603	+				-0.2
3,156,603	+				-0.2
3,156,603	+				+0.8
3,156,604	-				+0.6
3,156,604	-				+0.8
3,156,641	+				-0.2
3,156,701	+				-1.6
3,156,701	+				+0.6
3,156,701	+				+0.9
3,156,701	+				-0.2
3,156,702	-				+0.3
3,156,702	-				-1.8
3,156,702	-				+0.3
3,156,980	+		LRK54_RS14165	0.35	+0.8
3,156,980	+		LRK54_RS14165	0.35	-0.7
3,156,981	-		LRK54_RS14165	0.35	-2.2
3,156,981	-		LRK54_RS14165	0.35	-1.5
3,156,981	-		LRK54_RS14165	0.35	-0.7
3,156,981	-		LRK54_RS14165	0.35	-1.5
3,157,079	+		LRK54_RS14165	0.47	+0.3
3,157,079	+		LRK54_RS14165	0.47	-0.5
3,157,079	+		LRK54_RS14165	0.47	-1.0
3,157,079	+		LRK54_RS14165	0.47	-1.8
3,157,079	+		LRK54_RS14165	0.47	+1.3
3,157,080	-		LRK54_RS14165	0.47	+1.3
3,157,080	-		LRK54_RS14165	0.47	-1.1
3,157,080	-		LRK54_RS14165	0.47	+0.8
3,157,080	-		LRK54_RS14165	0.47	-1.0
3,157,080	-		LRK54_RS14165	0.47	-0.5
3,157,202	+		LRK54_RS14165	0.61	+0.8
3,157,202	+		LRK54_RS14165	0.61	+1.3
3,157,202	+		LRK54_RS14165	0.61	-0.7
3,157,203	-		LRK54_RS14165	0.61	-1.9
3,157,203	-		LRK54_RS14165	0.61	-0.5
3,157,203	-		LRK54_RS14165	0.61	+0.3
3,157,203	-		LRK54_RS14165	0.61	+0.3
3,157,203	-		LRK54_RS14165	0.61	-1.5
3,157,205	+		LRK54_RS14165	0.62	-0.1