Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09865

Experiment: 3E-T1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3E-T1
2,160,904	+				-1.7
2,161,053	+				+0.7
2,161,053	+				+0.7
2,161,053	+				-1.5
2,161,054	-				-0.7
2,161,054	-				+2.3
2,161,553	+				-0.9
2,161,553	+				-1.3
2,161,554	-				-1.3
2,161,554	-				+1.1
2,161,921	+		LRK54_RS09865	0.78	-0.9
2,161,921	+		LRK54_RS09865	0.78	-1.7
2,161,955	+				+0.0
2,161,956	-				+0.7
2,161,956	-				-0.9
2,161,956	-				-0.3
2,161,956	-				-0.3
2,161,956	-				-0.3
2,161,967	+				-0.7
2,161,967	+				-0.3
2,161,967	+				+1.0
2,161,968	-				-1.7
2,161,968	-				-0.3
2,161,968	-				-0.9
2,161,968	-				+1.7
2,162,032	-				-0.3
2,162,032	-				+1.1
2,162,097	+				+0.7
2,162,097	+				-2.1
2,162,340	+		LRK54_RS09870	0.19	-0.9
2,162,340	+		LRK54_RS09870	0.19	-0.5
2,162,340	+		LRK54_RS09870	0.19	+0.7
2,162,340	+		LRK54_RS09870	0.19	-0.3
2,162,340	+		LRK54_RS09870	0.19	-0.9
2,162,340	+		LRK54_RS09870	0.19	-2.9
2,162,340	+		LRK54_RS09870	0.19	+0.7
2,162,340	+		LRK54_RS09870	0.19	+1.3
2,162,341	-		LRK54_RS09870	0.19	-1.7
2,162,341	-		LRK54_RS09870	0.19	+0.3
2,162,341	-		LRK54_RS09870	0.19	+0.7
2,162,341	-		LRK54_RS09870	0.19	+0.1
2,162,341	-		LRK54_RS09870	0.19	-0.9
2,162,341	-		LRK54_RS09870	0.19	-0.1
2,162,341	-		LRK54_RS09870	0.19	-0.1
2,162,341	-		LRK54_RS09870	0.19	-1.7
2,162,341	-		LRK54_RS09870	0.19	-0.5
2,162,341	-		LRK54_RS09870	0.19	-0.6
2,162,409	+		LRK54_RS09870	0.23	-0.9
2,162,409	+		LRK54_RS09870	0.23	+0.7
2,162,409	+		LRK54_RS09870	0.23	-1.8
2,162,409	+		LRK54_RS09870	0.23	-0.3
2,162,409	+		LRK54_RS09870	0.23	-1.7
2,162,409	+		LRK54_RS09870	0.23	-0.9
2,162,409	+		LRK54_RS09870	0.23	-0.3
2,162,410	-		LRK54_RS09870	0.23	-1.3
2,162,410	-		LRK54_RS09870	0.23	-1.1
2,162,410	-		LRK54_RS09870	0.23	+2.0
2,162,410	-		LRK54_RS09870	0.23	-2.3
2,162,538	+		LRK54_RS09870	0.31	+1.2
2,162,538	+		LRK54_RS09870	0.31	-0.9
2,162,538	+		LRK54_RS09870	0.31	+1.0
2,162,538	+		LRK54_RS09870	0.31	+0.1
2,162,539	-		LRK54_RS09870	0.31	-1.6
2,162,539	-		LRK54_RS09870	0.31	-1.9
2,162,539	-		LRK54_RS09870	0.31	-0.3
2,162,539	-		LRK54_RS09870	0.31	-1.1
2,162,754	+		LRK54_RS09870	0.43	-1.3
2,162,755	-		LRK54_RS09870	0.43	-0.3
2,162,823	+		LRK54_RS09870	0.47	-0.7
2,162,823	+		LRK54_RS09870	0.47	-1.3
2,162,823	+		LRK54_RS09870	0.47	-0.9
2,162,823	+		LRK54_RS09870	0.47	+0.7
2,162,823	+		LRK54_RS09870	0.47	-0.4
2,162,823	+		LRK54_RS09870	0.47	+0.7
2,162,823	+		LRK54_RS09870	0.47	+0.7
2,162,823	+		LRK54_RS09870	0.47	-2.8
2,162,823	+		LRK54_RS09870	0.47	-0.3
2,162,823	+		LRK54_RS09870	0.47	-0.7
2,162,823	+		LRK54_RS09870	0.47	+0.7
2,162,823	+		LRK54_RS09870	0.47	-1.5
2,162,823	+		LRK54_RS09870	0.47	-0.3
2,162,823	+		LRK54_RS09870	0.47	-1.2
2,162,824	-		LRK54_RS09870	0.47	-0.7
2,162,824	-		LRK54_RS09870	0.47	-1.3
2,162,824	-		LRK54_RS09870	0.47	+0.9
2,162,824	-		LRK54_RS09870	0.47	-1.3
2,162,824	-		LRK54_RS09870	0.47	-0.5
2,162,886	+		LRK54_RS09870	0.51	-0.9
2,162,886	+		LRK54_RS09870	0.51	-0.2
2,162,887	-		LRK54_RS09870	0.51	-0.7
2,162,887	-		LRK54_RS09870	0.51	+0.7
2,162,887	-		LRK54_RS09870	0.51	-1.1
2,162,887	-		LRK54_RS09870	0.51	-0.7
2,162,887	-		LRK54_RS09870	0.51	-1.1
2,162,887	-		LRK54_RS09870	0.51	+1.7
2,162,887	-		LRK54_RS09870	0.51	-1.3
2,162,887	-		LRK54_RS09870	0.51	-0.3
2,162,963	+		LRK54_RS09870	0.55	-0.3