Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00515

Experiment: 3E-T1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3E-T1
107,388	+				-0.2
107,398	+				+0.5
107,398	+				+0.2
107,398	+				+0.2
107,398	+				-0.1
107,398	+				+1.2
107,398	+				-0.8
107,399	-				+1.2
107,399	-				-0.8
107,399	-				-0.4
107,399	-				+0.6
107,399	-				-0.8
107,445	+				+0.2
107,445	+				-0.4
107,445	+				+0.2
107,445	+				+1.2
107,445	+				+1.2
107,446	-				+1.2
107,446	-				+0.2
107,446	-				+1.2
107,446	-				+1.2
107,446	-				+0.0
107,452	+				-0.1
107,452	+				+2.8
107,452	+				+0.4
107,452	+				+1.2
107,452	+				+1.2
107,453	-				-2.2
107,453	-				-0.9
107,453	-				-0.4
107,453	-				-1.6
107,453	-				+1.2
107,453	-				+0.6
107,453	-				+1.2
107,539	+				-0.4
107,539	+				+0.2
107,539	+				+2.2
107,539	+				-0.4
107,540	-				+1.2
107,540	-				+0.2
107,540	-				-1.6
107,540	-				+1.2
107,602	+		LRK54_RS00510	0.11	-0.6
107,609	+		LRK54_RS00510	0.12	+1.2
107,609	+		LRK54_RS00510	0.12	-0.2
107,609	+		LRK54_RS00510	0.12	+0.6
107,609	+		LRK54_RS00510	0.12	+0.0
107,609	+		LRK54_RS00510	0.12	+0.2
107,609	+		LRK54_RS00510	0.12	-0.1
107,609	+		LRK54_RS00510	0.12	-0.4
107,609	+		LRK54_RS00510	0.12	+0.2
107,609	+		LRK54_RS00510	0.12	-0.8
107,609	+		LRK54_RS00510	0.12	+0.8
107,609	+		LRK54_RS00510	0.12	+0.2
107,609	+		LRK54_RS00510	0.12	+1.2
107,609	+		LRK54_RS00510	0.12	-0.4
107,609	+		LRK54_RS00510	0.12	+0.5
107,609	+		LRK54_RS00510	0.12	-0.4
107,609	+		LRK54_RS00510	0.12	+2.2
107,609	+		LRK54_RS00510	0.12	+1.2
107,609	+		LRK54_RS00510	0.12	-0.4
107,609	+		LRK54_RS00510	0.12	+0.6
107,609	+		LRK54_RS00510	0.12	+0.6
107,609	+		LRK54_RS00510	0.12	-1.3
107,609	+		LRK54_RS00510	0.12	+0.2
107,609	+		LRK54_RS00510	0.12	+1.2
107,609	+		LRK54_RS00510	0.12	+0.5
107,609	+		LRK54_RS00510	0.12	-1.4
107,610	-		LRK54_RS00510	0.12	-1.1
107,610	-		LRK54_RS00510	0.12	+0.2
107,610	-		LRK54_RS00510	0.12	-1.1
107,610	-		LRK54_RS00510	0.12	-0.8
107,610	-		LRK54_RS00510	0.12	+0.2
107,610	-		LRK54_RS00510	0.12	+0.2
107,610	-		LRK54_RS00510	0.12	+0.2
107,610	-		LRK54_RS00510	0.12	+0.2
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	-1.4
107,610	-		LRK54_RS00510	0.12	-1.1
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	-1.5
107,610	-		LRK54_RS00510	0.12	-1.8
107,610	-		LRK54_RS00510	0.12	-0.9
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	-0.6
107,610	-		LRK54_RS00510	0.12	-0.8
107,610	-		LRK54_RS00510	0.12	-0.4
107,610	-		LRK54_RS00510	0.12	+0.2
107,610	-		LRK54_RS00510	0.12	-0.4
107,610	-		LRK54_RS00510	0.12	-0.4
107,610	-		LRK54_RS00510	0.12	-2.2
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	-0.9
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	+1.2
107,610	-		LRK54_RS00510	0.12	-0.5
107,610	-		LRK54_RS00510	0.12	+0.6
107,855	+		LRK54_RS00510	0.43	+0.2
107,855	+		LRK54_RS00510	0.43	-1.6
107,855	+		LRK54_RS00510	0.43	+0.9
107,856	-		LRK54_RS00510	0.43	+0.2
107,856	-		LRK54_RS00510	0.43	+0.2
107,856	-		LRK54_RS00510	0.43	-2.1
107,856	-		LRK54_RS00510	0.43	+0.2
107,856	-		LRK54_RS00510	0.43	-1.1
107,856	-		LRK54_RS00510	0.43	-1.1
107,856	-		LRK54_RS00510	0.43	+0.2
107,976	+		LRK54_RS00510	0.59	-0.4
107,976	+		LRK54_RS00510	0.59	+0.2
107,976	+		LRK54_RS00510	0.59	+0.1
107,976	+		LRK54_RS00510	0.59	-2.1
107,976	+		LRK54_RS00510	0.59	-1.6
107,976	+		LRK54_RS00510	0.59	-0.5
107,977	-		LRK54_RS00510	0.59	+1.2
107,977	-		LRK54_RS00510	0.59	+1.2
107,977	-		LRK54_RS00510	0.59	+1.2
107,977	-		LRK54_RS00510	0.59	+0.2
107,977	-		LRK54_RS00510	0.59	+1.2
107,977	-		LRK54_RS00510	0.59	-1.6
107,977	-		LRK54_RS00510	0.59	-1.4
107,998	+		LRK54_RS00510	0.61	-0.6
107,999	-		LRK54_RS00510	0.62	+0.2
108,053	+		LRK54_RS00510	0.68	-0.0
108,053	+		LRK54_RS00510	0.68	+2.8
108,053	+		LRK54_RS00510	0.68	-1.4
108,053	+		LRK54_RS00510	0.68	-1.8
108,053	+		LRK54_RS00510	0.68	+0.4
108,053	+		LRK54_RS00510	0.68	+0.2
108,053	+		LRK54_RS00510	0.68	-0.8
108,053	+		LRK54_RS00510	0.68	-0.4
108,053	+		LRK54_RS00510	0.68	-0.4
108,053	+		LRK54_RS00510	0.68	+0.1
108,053	+		LRK54_RS00510	0.68	+1.2
108,053	+		LRK54_RS00510	0.68	+0.2
108,053	+		LRK54_RS00510	0.68	-1.4
108,053	+		LRK54_RS00510	0.68	+0.8
108,054	-		LRK54_RS00510	0.69	-1.1
108,054	-		LRK54_RS00510	0.69	+1.8
108,054	-		LRK54_RS00510	0.69	-0.6
108,054	-		LRK54_RS00510	0.69	+0.2
108,054	-		LRK54_RS00510	0.69	+0.2
108,054	-		LRK54_RS00510	0.69	+1.2
108,054	-		LRK54_RS00510	0.69	-0.2
108,054	-		LRK54_RS00510	0.69	-0.4
108,054	-		LRK54_RS00510	0.69	-0.4
108,054	-		LRK54_RS00510	0.69	-0.8
108,054	-		LRK54_RS00510	0.69	+0.9
108,056	+		LRK54_RS00510	0.69	+2.8
108,056	+		LRK54_RS00510	0.69	+1.2
108,056	+		LRK54_RS00510	0.69	+0.9
108,056	+		LRK54_RS00510	0.69	-0.0
108,056	+		LRK54_RS00510	0.69	+0.2
108,056	+		LRK54_RS00510	0.69	-1.6
108,056	+		LRK54_RS00510	0.69	-0.4
108,056	+		LRK54_RS00510	0.69	+0.2
108,056	+		LRK54_RS00510	0.69	-0.8
108,056	+		LRK54_RS00510	0.69	+1.2
108,056	+		LRK54_RS00510	0.69	-0.1
108,056	+		LRK54_RS00510	0.69	-1.9
108,056	+		LRK54_RS00510	0.69	-1.2
108,056	+		LRK54_RS00510	0.69	-0.8
108,056	+		LRK54_RS00510	0.69	+1.2
108,056	+		LRK54_RS00510	0.69	-1.9
108,056	+		LRK54_RS00510	0.69	-0.2
108,056	+		LRK54_RS00510	0.69	-1.1
108,056	+		LRK54_RS00510	0.69	-0.4
108,056	+		LRK54_RS00510	0.69	+1.2
108,056	+		LRK54_RS00510	0.69	+0.2
108,056	+		LRK54_RS00510	0.69	-0.4
108,056	+		LRK54_RS00510	0.69	+0.2
108,056	+		LRK54_RS00510	0.69	-1.4
108,056	+		LRK54_RS00510	0.69	-0.8
108,056	+		LRK54_RS00510	0.69	-2.1
108,056	+		LRK54_RS00510	0.69	-2.1
108,056	+		LRK54_RS00510	0.69	-0.9
108,056	+		LRK54_RS00510	0.69	+1.2
108,056	+		LRK54_RS00510	0.69	-0.8
108,056	+		LRK54_RS00510	0.69	-0.8
108,056	+		LRK54_RS00510	0.69	+2.2
108,057	-		LRK54_RS00510	0.69	+1.2
108,057	-		LRK54_RS00510	0.69	-0.0
108,057	-		LRK54_RS00510	0.69	-1.9
108,057	-		LRK54_RS00510	0.69	+0.2
108,057	-		LRK54_RS00510	0.69	+0.5
108,057	-		LRK54_RS00510	0.69	+1.2
108,057	-		LRK54_RS00510	0.69	-1.4
108,057	-		LRK54_RS00510	0.69	-0.9
108,057	-		LRK54_RS00510	0.69	+0.5
108,057	-		LRK54_RS00510	0.69	-0.1
108,057	-		LRK54_RS00510	0.69	-0.8
108,057	-		LRK54_RS00510	0.69	-0.4
108,057	-		LRK54_RS00510	0.69	-0.8
108,057	-		LRK54_RS00510	0.69	-0.4
108,057	-		LRK54_RS00510	0.69	+0.8
108,057	-		LRK54_RS00510	0.69	+1.2
108,057	-		LRK54_RS00510	0.69	+1.2
108,057	-		LRK54_RS00510	0.69	-0.8
108,057	-		LRK54_RS00510	0.69	-1.0
108,114	-		LRK54_RS00510	0.76	-0.9
108,227	+				+0.6
108,227	+				+1.2
108,227	+				+0.2
108,228	-				-1.4
108,228	-				+0.2
108,228	-				+1.2
108,254	+				+2.2
108,277	+				-0.4
108,277	+				-0.8
108,277	+				-0.4
108,277	+				+0.2
108,277	+				+0.6
108,277	+				-0.8
108,277	+				+0.2
108,277	+				-0.4
108,277	+				+1.2
108,277	+				+1.2
108,277	+				+1.2
108,278	-				+0.5
108,278	-				-0.4
108,278	-				-0.9
108,278	-				-0.9
108,278	-				+0.2
108,278	-				-0.1
108,278	-				-0.4
108,278	-				+0.2
108,278	-				+0.2
108,278	-				+0.2
108,278	-				-2.0
108,278	-				-1.1
108,278	-				-0.5
108,278	-				-0.6
108,278	-				-0.4
108,278	-				-0.8
108,392	+		LRK54_RS00515	0.14	+1.2
108,392	+		LRK54_RS00515	0.14	-0.9
108,392	+		LRK54_RS00515	0.14	-1.8
108,392	+		LRK54_RS00515	0.14	-0.4
108,392	+		LRK54_RS00515	0.14	+0.2
108,393	-		LRK54_RS00515	0.14	+1.2
108,393	-		LRK54_RS00515	0.14	+0.2
108,398	+		LRK54_RS00515	0.15	-2.4
108,398	+		LRK54_RS00515	0.15	-0.1
108,398	+		LRK54_RS00515	0.15	-0.8
108,398	+		LRK54_RS00515	0.15	+0.6
108,398	+		LRK54_RS00515	0.15	+0.0
108,398	+		LRK54_RS00515	0.15	-2.7
108,398	+		LRK54_RS00515	0.15	-0.8
108,398	+		LRK54_RS00515	0.15	+2.2
108,398	+		LRK54_RS00515	0.15	+0.2
108,398	+		LRK54_RS00515	0.15	-0.4
108,398	+		LRK54_RS00515	0.15	+1.2
108,398	+		LRK54_RS00515	0.15	-0.4
108,398	+		LRK54_RS00515	0.15	+0.2
108,398	+		LRK54_RS00515	0.15	-0.6
108,399	-		LRK54_RS00515	0.16	-0.8
108,399	-		LRK54_RS00515	0.16	-0.4
108,399	-		LRK54_RS00515	0.16	-0.8
108,399	-		LRK54_RS00515	0.16	-1.8
108,399	-		LRK54_RS00515	0.16	-0.9
108,399	-		LRK54_RS00515	0.16	+0.2
108,399	-		LRK54_RS00515	0.16	-1.2
108,399	-		LRK54_RS00515	0.16	-0.4
108,399	-		LRK54_RS00515	0.16	+2.2
108,399	-		LRK54_RS00515	0.16	-2.2
108,399	-		LRK54_RS00515	0.16	+0.6
108,399	-		LRK54_RS00515	0.16	-0.4
108,497	+		LRK54_RS00515	0.39	-1.9
108,497	+		LRK54_RS00515	0.39	+1.6
108,497	+		LRK54_RS00515	0.39	-1.6
108,497	+		LRK54_RS00515	0.39	+0.9
108,497	+		LRK54_RS00515	0.39	-0.1
108,498	-		LRK54_RS00515	0.39	+0.2
108,498	-		LRK54_RS00515	0.39	-0.8
108,498	-		LRK54_RS00515	0.39	+1.2
108,498	-		LRK54_RS00515	0.39	-1.6
108,610	-		LRK54_RS00515	0.66	-0.9
108,680	+		LRK54_RS00515	0.83	-0.1
108,680	+		LRK54_RS00515	0.83	-1.6
108,680	+		LRK54_RS00515	0.83	-0.6
108,680	+		LRK54_RS00515	0.83	+1.2
108,680	+		LRK54_RS00515	0.83	-0.4
108,680	+		LRK54_RS00515	0.83	-0.4
108,680	+		LRK54_RS00515	0.83	+0.2
108,680	+		LRK54_RS00515	0.83	-0.8
108,681	-		LRK54_RS00515	0.83	+1.2
108,681	-		LRK54_RS00515	0.83	-0.4
108,681	-		LRK54_RS00515	0.83	+1.6
108,681	-		LRK54_RS00515	0.83	+2.2
108,681	-		LRK54_RS00515	0.83	-2.1
108,681	-		LRK54_RS00515	0.83	-0.4
108,681	-		LRK54_RS00515	0.83	-0.9
108,681	-		LRK54_RS00515	0.83	-0.4
108,681	-		LRK54_RS00515	0.83	-0.8
108,681	-		LRK54_RS00515	0.83	-0.2
108,681	-		LRK54_RS00515	0.83	-0.4
108,772	+				-0.4
108,772	+				-0.4
108,772	+				+0.5
108,772	+				+0.4
108,772	+				-0.4
108,772	+				+0.2
108,772	+				-1.6
108,772	+				-0.1
108,773	-				-0.4
108,773	-				-0.1
108,773	-				+0.2
108,773	-				+0.2
108,773	-				+0.4
108,773	-				+1.8
108,773	-				-1.4
108,776	+				-0.4
108,777	-				+0.0
108,786	+				+1.2
108,786	+				+1.2
108,787	-				+0.8
108,787	-				+0.2
108,787	-				-0.5
108,856	+				-0.9
108,856	+				-0.6
108,856	+				-0.4
108,856	+				-1.8
108,856	+				-2.1
108,856	+				-2.2
108,856	+				-0.8
108,856	+				-1.4
108,856	+				+1.2
108,856	+				+0.2
108,856	+				-0.1
108,856	+				-0.4
108,856	+				+1.2
108,856	+				+0.2
108,856	+				-1.7
108,856	+				+1.2
108,856	+				+0.1
108,856	+				-1.1
108,856	+				-0.4
108,856	+				-0.0
108,856	+				-1.4
108,856	+				+0.2
108,857	-				-1.4
108,857	-				-0.4
108,857	-				-0.8
108,857	-				+0.2
108,857	-				+1.2
108,857	-				+0.2
108,857	-				-0.4
108,857	-				-0.9
108,857	-				+1.6
108,857	-				+0.6
108,857	-				+0.2
108,857	-				-0.4
108,857	-				-1.0
108,857	-				+0.2
108,857	-				-2.0
108,857	-				+1.2
108,857	-				-0.8
108,857	-				+0.2
108,857	-				-1.1
108,857	-				+1.2
108,857	-				-1.2
108,857	-				+1.8
108,857	-				+0.2
108,857	-				+0.8
108,857	-				-1.8
108,857	-				-0.4
108,857	-				+0.2
108,858	+				-0.5
108,858	+				-0.8
108,858	+				-0.4
108,858	+				+1.2
108,858	+				+0.2
108,858	+				+1.2
108,858	+				+1.2
108,858	+				-2.5
108,859	-				+1.0
108,859	-				-0.6
108,859	-				-1.9
108,859	-				-0.4
108,859	-				-0.4
108,859	-				-1.7
108,871	-				+0.6
108,957	+				-1.6
108,957	+				-0.4
108,957	+				-0.5
108,957	+				-0.2
108,957	+				-1.6
108,957	+				-0.5
108,957	+				+2.2
108,957	+				-0.9
108,957	+				-0.6
108,957	+				-0.1
108,957	+				+0.2
108,958	-				-1.9
108,958	-				-0.6
108,958	-				-1.4
108,958	-				-0.4
108,958	-				-1.1
108,958	-				-0.5
108,958	-				-1.8
108,958	-				-0.4
108,958	-				+0.2
108,958	-				-1.0
109,382	+				-1.1
109,382	+				+0.9
109,382	+				-0.5
109,382	+				-1.4
109,382	+				-0.4
109,382	+				-1.4
109,382	+				-1.4
109,382	+				-2.7
109,382	+				-0.9
109,382	+				-1.8
109,383	-				+0.2
109,383	-				+1.2
109,383	-				-0.4
109,383	-				-1.6
109,383	-				-0.8
109,383	-				-1.2
109,383	-				-0.8
109,385	+				-0.8
109,385	+				-1.6
109,385	+				-1.1
109,385	+				-1.0
109,386	-				-1.9
109,386	-				+0.2
109,386	-				-1.8
109,386	-				+0.2
109,386	-				-1.5
109,386	-				-1.4
109,442	+		LRK54_RS00520	0.12	-1.1
109,442	+		LRK54_RS00520	0.12	-0.8
109,442	+		LRK54_RS00520	0.12	-0.4
109,442	+		LRK54_RS00520	0.12	+1.8
109,442	+		LRK54_RS00520	0.12	-1.4
109,442	+		LRK54_RS00520	0.12	-1.9
109,442	+		LRK54_RS00520	0.12	-0.5
109,442	+		LRK54_RS00520	0.12	+0.6
109,442	+		LRK54_RS00520	0.12	+0.4
109,443	-		LRK54_RS00520	0.12	-1.1
109,443	-		LRK54_RS00520	0.12	-1.9
109,443	-		LRK54_RS00520	0.12	-0.4
109,443	-		LRK54_RS00520	0.12	-2.4
109,443	-		LRK54_RS00520	0.12	+0.2
109,443	-		LRK54_RS00520	0.12	+0.2
109,443	-		LRK54_RS00520	0.12	-1.4
109,443	-		LRK54_RS00520	0.12	+0.6
109,443	-		LRK54_RS00520	0.12	-0.6
109,451	+		LRK54_RS00520	0.12	-1.1
109,451	+		LRK54_RS00520	0.12	-0.9
109,451	+		LRK54_RS00520	0.12	+0.8
109,451	+		LRK54_RS00520	0.12	-1.1
109,451	+		LRK54_RS00520	0.12	-0.8
109,451	+		LRK54_RS00520	0.12	+1.2
109,451	+		LRK54_RS00520	0.12	+1.2
109,452	-		LRK54_RS00520	0.12	-2.7
109,452	-		LRK54_RS00520	0.12	-0.4
109,452	-		LRK54_RS00520	0.12	-0.7
109,452	-		LRK54_RS00520	0.12	-0.8
109,452	-		LRK54_RS00520	0.12	+0.2
109,461	-		LRK54_RS00520	0.12	-0.8