Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS18125

Experiment: 2F-T1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2F-T1
3,952,914	+				+1.3
3,952,914	+				-1.3
3,952,914	+				+1.3
3,952,914	+				-0.1
3,952,914	+				+0.3
3,952,915	-				+1.3
3,952,915	-				+0.7
3,952,915	-				-1.4
3,952,915	-				+1.3
3,952,915	-				+1.3
3,952,915	-				-1.5
3,952,915	-				+0.3
3,952,915	-				-1.5
3,952,915	-				+0.3
3,952,915	-				-0.5
3,952,915	-				-0.3
3,952,915	-				-0.3
3,952,915	-				+1.7
3,953,178	+		LRK54_RS18120	0.20	+0.1
3,953,178	+		LRK54_RS18120	0.20	+1.3
3,953,178	+		LRK54_RS18120	0.20	+0.3
3,953,178	+		LRK54_RS18120	0.20	-0.7
3,953,178	+		LRK54_RS18120	0.20	+0.3
3,953,178	+		LRK54_RS18120	0.20	+0.5
3,953,178	+		LRK54_RS18120	0.20	+1.3
3,953,179	-		LRK54_RS18120	0.20	-2.3
3,953,179	-		LRK54_RS18120	0.20	-0.6
3,953,179	-		LRK54_RS18120	0.20	+0.3
3,953,179	-		LRK54_RS18120	0.20	+1.9
3,953,179	-		LRK54_RS18120	0.20	+0.3
3,953,179	-		LRK54_RS18120	0.20	-1.0
3,953,179	-		LRK54_RS18120	0.20	+0.3
3,953,179	-		LRK54_RS18120	0.20	-2.5
3,953,205	+		LRK54_RS18120	0.24	-0.7
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	-1.5
3,953,205	+		LRK54_RS18120	0.24	-0.0
3,953,205	+		LRK54_RS18120	0.24	-1.0
3,953,205	+		LRK54_RS18120	0.24	+1.9
3,953,205	+		LRK54_RS18120	0.24	-0.7
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	+1.3
3,953,205	+		LRK54_RS18120	0.24	+2.3
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	-0.7
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	-1.5
3,953,205	+		LRK54_RS18120	0.24	-1.9
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	+1.3
3,953,205	+		LRK54_RS18120	0.24	-0.7
3,953,205	+		LRK54_RS18120	0.24	+1.3
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	-0.9
3,953,205	+		LRK54_RS18120	0.24	+1.3
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	-0.7
3,953,205	+		LRK54_RS18120	0.24	-1.2
3,953,205	+		LRK54_RS18120	0.24	+0.1
3,953,205	+		LRK54_RS18120	0.24	-2.6
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	-0.3
3,953,205	+		LRK54_RS18120	0.24	+2.3
3,953,205	+		LRK54_RS18120	0.24	-1.0
3,953,205	+		LRK54_RS18120	0.24	+1.3
3,953,205	+		LRK54_RS18120	0.24	-0.0
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	-1.5
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,205	+		LRK54_RS18120	0.24	-1.3
3,953,205	+		LRK54_RS18120	0.24	-1.0
3,953,205	+		LRK54_RS18120	0.24	+0.7
3,953,205	+		LRK54_RS18120	0.24	+0.3
3,953,206	-		LRK54_RS18120	0.24	-0.3
3,953,206	-		LRK54_RS18120	0.24	-0.4
3,953,206	-		LRK54_RS18120	0.24	-1.0
3,953,206	-		LRK54_RS18120	0.24	+2.9
3,953,206	-		LRK54_RS18120	0.24	-0.3
3,953,206	-		LRK54_RS18120	0.24	-0.3
3,953,206	-		LRK54_RS18120	0.24	-1.9
3,953,206	-		LRK54_RS18120	0.24	+0.3
3,953,206	-		LRK54_RS18120	0.24	-0.3
3,953,206	-		LRK54_RS18120	0.24	+1.3
3,953,206	-		LRK54_RS18120	0.24	+0.3
3,953,206	-		LRK54_RS18120	0.24	+0.3
3,953,206	-		LRK54_RS18120	0.24	-0.5
3,953,206	-		LRK54_RS18120	0.24	-2.2
3,953,206	-		LRK54_RS18120	0.24	-0.7
3,953,206	-		LRK54_RS18120	0.24	-0.6
3,953,206	-		LRK54_RS18120	0.24	-1.3
3,953,206	-		LRK54_RS18120	0.24	+0.7
3,953,206	-		LRK54_RS18120	0.24	+0.3
3,953,206	-		LRK54_RS18120	0.24	-0.3
3,953,206	-		LRK54_RS18120	0.24	-0.6
3,953,206	-		LRK54_RS18120	0.24	-1.0
3,953,206	-		LRK54_RS18120	0.24	+1.3
3,953,206	-		LRK54_RS18120	0.24	-1.3
3,953,206	-		LRK54_RS18120	0.24	+1.3
3,953,206	-		LRK54_RS18120	0.24	-0.7
3,953,206	-		LRK54_RS18120	0.24	+1.3
3,953,206	-		LRK54_RS18120	0.24	-0.6
3,953,206	-		LRK54_RS18120	0.24	+1.3
3,953,206	-		LRK54_RS18120	0.24	+0.7
3,953,206	-		LRK54_RS18120	0.24	-1.5
3,953,206	-		LRK54_RS18120	0.24	+0.9
3,953,206	-		LRK54_RS18120	0.24	-0.7
3,953,206	-		LRK54_RS18120	0.24	+0.3
3,953,206	-		LRK54_RS18120	0.24	-1.9
3,953,206	-		LRK54_RS18120	0.24	-2.4
3,953,206	-		LRK54_RS18120	0.24	+0.1
3,953,206	-		LRK54_RS18120	0.24	-0.0
3,953,206	-		LRK54_RS18120	0.24	+0.7
3,953,427	+		LRK54_RS18120	0.56	-0.5
3,953,427	+		LRK54_RS18120	0.56	+1.3
3,953,427	+		LRK54_RS18120	0.56	+0.3
3,953,427	+		LRK54_RS18120	0.56	-1.0
3,953,427	+		LRK54_RS18120	0.56	-0.3
3,953,427	+		LRK54_RS18120	0.56	-1.2
3,953,427	+		LRK54_RS18120	0.56	+1.3
3,953,427	+		LRK54_RS18120	0.56	+1.9
3,953,427	+		LRK54_RS18120	0.56	-1.4
3,953,428	-		LRK54_RS18120	0.56	-1.3
3,953,428	-		LRK54_RS18120	0.56	-1.0
3,953,428	-		LRK54_RS18120	0.56	+0.6
3,953,428	-		LRK54_RS18120	0.56	-0.7
3,953,428	-		LRK54_RS18120	0.56	-0.1
3,953,428	-		LRK54_RS18120	0.56	+2.3
3,953,428	-		LRK54_RS18120	0.56	-0.7
3,953,428	-		LRK54_RS18120	0.56	-0.7
3,953,428	-		LRK54_RS18120	0.56	+1.3
3,953,428	-		LRK54_RS18120	0.56	+1.3
3,953,428	-		LRK54_RS18120	0.56	-0.3
3,953,428	-		LRK54_RS18120	0.56	+1.3
3,953,538	+		LRK54_RS18120	0.72	+1.3
3,953,538	+		LRK54_RS18120	0.72	+0.1
3,953,538	+		LRK54_RS18120	0.72	-0.7
3,953,538	+		LRK54_RS18120	0.72	-0.5
3,953,538	+		LRK54_RS18120	0.72	-0.3
3,953,538	+		LRK54_RS18120	0.72	-1.5
3,953,538	+		LRK54_RS18120	0.72	-1.7
3,953,538	+		LRK54_RS18120	0.72	-1.2
3,953,538	+		LRK54_RS18120	0.72	+0.3
3,953,538	+		LRK54_RS18120	0.72	-1.9
3,953,538	+		LRK54_RS18120	0.72	+0.1
3,953,538	+		LRK54_RS18120	0.72	-0.7
3,953,538	+		LRK54_RS18120	0.72	-0.2
3,953,538	+		LRK54_RS18120	0.72	+0.6
3,953,538	+		LRK54_RS18120	0.72	+0.3
3,953,538	+		LRK54_RS18120	0.72	+0.3
3,953,538	+		LRK54_RS18120	0.72	+0.9
3,953,538	+		LRK54_RS18120	0.72	+1.3
3,953,538	+		LRK54_RS18120	0.72	-0.7
3,953,538	+		LRK54_RS18120	0.72	-0.3
3,953,538	+		LRK54_RS18120	0.72	-0.3
3,953,538	+		LRK54_RS18120	0.72	-2.0
3,953,538	+		LRK54_RS18120	0.72	-1.3
3,953,538	+		LRK54_RS18120	0.72	+1.3
3,953,538	+		LRK54_RS18120	0.72	+0.8
3,953,538	+		LRK54_RS18120	0.72	-1.2
3,953,538	+		LRK54_RS18120	0.72	+1.3
3,953,538	+		LRK54_RS18120	0.72	-1.2
3,953,538	+		LRK54_RS18120	0.72	-0.3
3,953,538	+		LRK54_RS18120	0.72	+1.3
3,953,539	-		LRK54_RS18120	0.72	+1.3
3,953,539	-		LRK54_RS18120	0.72	-1.1
3,953,539	-		LRK54_RS18120	0.72	+0.3
3,953,539	-		LRK54_RS18120	0.72	+1.3
3,953,539	-		LRK54_RS18120	0.72	+0.3
3,953,539	-		LRK54_RS18120	0.72	+0.3
3,953,539	-		LRK54_RS18120	0.72	-0.7
3,953,539	-		LRK54_RS18120	0.72	-0.7
3,953,539	-		LRK54_RS18120	0.72	-1.6
3,953,539	-		LRK54_RS18120	0.72	-1.5
3,953,539	-		LRK54_RS18120	0.72	+1.3
3,953,539	-		LRK54_RS18120	0.72	-1.4
3,953,539	-		LRK54_RS18120	0.72	-0.3
3,953,539	-		LRK54_RS18120	0.72	+0.1
3,953,539	-		LRK54_RS18120	0.72	-0.3
3,953,539	-		LRK54_RS18120	0.72	+0.3
3,953,539	-		LRK54_RS18120	0.72	-1.9
3,953,539	-		LRK54_RS18120	0.72	+2.3
3,953,539	-		LRK54_RS18120	0.72	-0.4
3,953,539	-		LRK54_RS18120	0.72	+1.3
3,953,539	-		LRK54_RS18120	0.72	+0.3
3,953,539	-		LRK54_RS18120	0.72	-0.5
3,953,539	-		LRK54_RS18120	0.72	+2.3
3,953,539	-		LRK54_RS18120	0.72	-0.7
3,953,539	-		LRK54_RS18120	0.72	-1.0
3,953,539	-		LRK54_RS18120	0.72	+0.1
3,953,539	-		LRK54_RS18120	0.72	-2.3
3,953,539	-		LRK54_RS18120	0.72	-0.6
3,953,612	+		LRK54_RS18120	0.82	+0.3
3,953,613	-		LRK54_RS18120	0.82	+1.3
3,953,652	+		LRK54_RS18120	0.88	+0.3
3,953,787	+				+0.3
3,953,787	+				-1.3
3,953,787	+				+0.7
3,953,787	+				+0.3
3,953,787	+				-0.7
3,953,787	+				+1.3
3,953,787	+				-1.7
3,953,787	+				+1.3
3,953,787	+				+2.3
3,953,787	+				-2.2
3,953,787	+				-0.3
3,953,787	+				+0.3
3,953,787	+				+0.3
3,953,787	+				+0.3
3,953,787	+				+0.1
3,953,787	+				+1.3
3,953,787	+				-0.3
3,953,787	+				-1.9
3,953,787	+				-1.5
3,953,787	+				-0.7
3,953,787	+				-2.4
3,953,787	+				+1.3
3,953,787	+				+1.3
3,953,787	+				-1.5
3,953,787	+				+1.3
3,953,787	+				+1.3
3,953,787	+				+2.9
3,953,787	+				-0.3
3,953,787	+				-0.0
3,953,787	+				+0.7
3,953,788	-				+0.3
3,953,788	-				+1.3
3,953,788	-				+1.3
3,953,788	-				-1.9
3,953,788	-				+1.3
3,953,788	-				-0.4
3,953,788	-				-1.3
3,953,788	-				+0.3
3,953,788	-				-2.2
3,953,788	-				-1.4
3,953,788	-				+1.3
3,953,788	-				-0.3
3,953,788	-				-1.3
3,953,788	-				-1.3
3,953,788	-				-0.0
3,953,788	-				-1.4
3,953,788	-				-0.3
3,953,788	-				-1.4
3,953,788	-				+0.3
3,953,788	-				-0.3
3,953,788	-				-0.7
3,953,788	-				-0.3
3,953,788	-				-0.8
3,953,788	-				-2.0
3,953,788	-				-2.0
3,953,788	-				-0.0
3,953,794	-				+1.3
3,953,875	+				-1.0
3,953,875	+				-1.0
3,953,875	+				-2.2
3,953,876	-				-0.3
3,953,912	+				-0.7
3,953,912	+				-1.3
3,954,059	+		LRK54_RS18125	0.13	+0.5
3,954,059	+		LRK54_RS18125	0.13	-2.2
3,954,059	+		LRK54_RS18125	0.13	-0.3
3,954,059	+		LRK54_RS18125	0.13	+0.3
3,954,059	+		LRK54_RS18125	0.13	-0.4
3,954,059	+		LRK54_RS18125	0.13	+1.3
3,954,059	+		LRK54_RS18125	0.13	-0.3
3,954,059	+		LRK54_RS18125	0.13	-0.7
3,954,059	+		LRK54_RS18125	0.13	+1.3
3,954,059	+		LRK54_RS18125	0.13	+0.6
3,954,059	+		LRK54_RS18125	0.13	-1.2
3,954,059	+		LRK54_RS18125	0.13	-0.6
3,954,059	+		LRK54_RS18125	0.13	+0.3
3,954,060	-		LRK54_RS18125	0.13	-0.3
3,954,060	-		LRK54_RS18125	0.13	-1.2
3,954,060	-		LRK54_RS18125	0.13	+0.1
3,954,060	-		LRK54_RS18125	0.13	-1.9
3,954,060	-		LRK54_RS18125	0.13	-0.3
3,954,060	-		LRK54_RS18125	0.13	-1.3
3,954,060	-		LRK54_RS18125	0.13	-0.7
3,954,060	-		LRK54_RS18125	0.13	+1.3
3,954,060	-		LRK54_RS18125	0.13	-0.0
3,954,060	-		LRK54_RS18125	0.13	+1.3
3,954,060	-		LRK54_RS18125	0.13	-0.3
3,954,060	-		LRK54_RS18125	0.13	+1.3
3,954,060	-		LRK54_RS18125	0.13	+1.3
3,954,079	+		LRK54_RS18125	0.14	+0.3
3,954,079	+		LRK54_RS18125	0.14	-1.3
3,954,079	+		LRK54_RS18125	0.14	+1.3
3,954,079	+		LRK54_RS18125	0.14	-0.9
3,954,080	-		LRK54_RS18125	0.14	+0.3
3,954,080	-		LRK54_RS18125	0.14	-1.0
3,954,080	-		LRK54_RS18125	0.14	+1.3
3,954,080	-		LRK54_RS18125	0.14	+0.7
3,954,080	-		LRK54_RS18125	0.14	+0.6
3,954,134	+		LRK54_RS18125	0.18	+1.3
3,954,134	+		LRK54_RS18125	0.18	-1.0
3,954,134	+		LRK54_RS18125	0.18	+0.7
3,954,134	+		LRK54_RS18125	0.18	-1.2
3,954,134	+		LRK54_RS18125	0.18	+0.3
3,954,134	+		LRK54_RS18125	0.18	-1.3
3,954,134	+		LRK54_RS18125	0.18	+0.7
3,954,134	+		LRK54_RS18125	0.18	-0.7
3,954,134	+		LRK54_RS18125	0.18	-0.0
3,954,134	+		LRK54_RS18125	0.18	+0.3
3,954,134	+		LRK54_RS18125	0.18	+1.3
3,954,134	+		LRK54_RS18125	0.18	+0.3
3,954,135	-		LRK54_RS18125	0.18	-0.3
3,954,135	-		LRK54_RS18125	0.18	+1.3
3,954,135	-		LRK54_RS18125	0.18	+0.5
3,954,135	-		LRK54_RS18125	0.18	-2.2
3,954,135	-		LRK54_RS18125	0.18	+1.3
3,954,135	-		LRK54_RS18125	0.18	+0.3
3,954,135	-		LRK54_RS18125	0.18	-0.9
3,954,135	-		LRK54_RS18125	0.18	-0.1
3,954,135	-		LRK54_RS18125	0.18	-1.2
3,954,135	-		LRK54_RS18125	0.18	-1.7
3,954,166	+		LRK54_RS18125	0.20	+0.1
3,954,166	+		LRK54_RS18125	0.20	+1.3
3,954,166	+		LRK54_RS18125	0.20	-0.7
3,954,166	+		LRK54_RS18125	0.20	-1.0
3,954,167	-		LRK54_RS18125	0.20	-1.6
3,954,167	-		LRK54_RS18125	0.20	-0.5
3,954,167	-		LRK54_RS18125	0.20	+0.7
3,954,167	-		LRK54_RS18125	0.20	-1.0
3,954,535	+		LRK54_RS18125	0.43	-0.3
3,954,535	+		LRK54_RS18125	0.43	-0.6
3,954,535	+		LRK54_RS18125	0.43	-1.6
3,954,535	+		LRK54_RS18125	0.43	-1.5
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