Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07370

Experiment: 2E-T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2E-T2
1,585,854	+		LRK54_RS07365	0.52	-1.1
1,585,854	+		LRK54_RS07365	0.52	-0.6
1,585,855	-		LRK54_RS07365	0.52	-1.3
1,585,855	-		LRK54_RS07365	0.52	+0.3
1,585,855	-		LRK54_RS07365	0.52	+0.7
1,585,855	-		LRK54_RS07365	0.52	+0.7
1,585,884	+		LRK54_RS07365	0.54	-0.3
1,585,884	+		LRK54_RS07365	0.54	+0.7
1,585,884	+		LRK54_RS07365	0.54	-0.8
1,585,884	+		LRK54_RS07365	0.54	+0.1
1,585,884	+		LRK54_RS07365	0.54	-0.3
1,585,884	+		LRK54_RS07365	0.54	+1.3
1,585,884	+		LRK54_RS07365	0.54	+0.7
1,585,884	+		LRK54_RS07365	0.54	+0.2
1,585,885	-		LRK54_RS07365	0.54	+0.7
1,585,885	-		LRK54_RS07365	0.54	-0.3
1,585,885	-		LRK54_RS07365	0.54	+0.7
1,586,019	+		LRK54_RS07365	0.61	+0.1
1,586,019	+		LRK54_RS07365	0.61	-0.0
1,586,019	+		LRK54_RS07365	0.61	-1.0
1,586,019	+		LRK54_RS07365	0.61	-0.9
1,586,020	-		LRK54_RS07365	0.61	+1.0
1,586,020	-		LRK54_RS07365	0.61	-1.5
1,586,020	-		LRK54_RS07365	0.61	-0.3
1,586,020	-		LRK54_RS07365	0.61	+0.3
1,586,152	+		LRK54_RS07365	0.68	-1.7
1,586,152	+		LRK54_RS07365	0.68	-1.0
1,586,153	-		LRK54_RS07365	0.68	-0.1
1,586,153	-		LRK54_RS07365	0.68	+0.1
1,586,153	-		LRK54_RS07365	0.68	-0.3
1,586,153	-		LRK54_RS07365	0.68	-0.9
1,586,280	+		LRK54_RS07365	0.75	-0.7
1,586,280	+		LRK54_RS07365	0.75	+2.3
1,586,280	+		LRK54_RS07365	0.75	+0.7
1,586,280	+		LRK54_RS07365	0.75	-0.1
1,586,280	+		LRK54_RS07365	0.75	-1.3
1,586,280	+		LRK54_RS07365	0.75	+0.3
1,586,280	+		LRK54_RS07365	0.75	-0.9
1,586,280	+		LRK54_RS07365	0.75	-0.4
1,586,280	+		LRK54_RS07365	0.75	+1.3
1,586,281	-		LRK54_RS07365	0.75	+0.2
1,586,281	-		LRK54_RS07365	0.75	-0.9
1,586,281	-		LRK54_RS07365	0.75	+0.7
1,586,281	-		LRK54_RS07365	0.75	-1.2
1,586,281	-		LRK54_RS07365	0.75	-0.4
1,586,281	-		LRK54_RS07365	0.75	-0.7
1,586,281	-		LRK54_RS07365	0.75	+0.1
1,586,281	-		LRK54_RS07365	0.75	-2.9
1,586,281	-		LRK54_RS07365	0.75	+0.4
1,586,283	+		LRK54_RS07365	0.75	-0.9
1,586,283	+		LRK54_RS07365	0.75	-0.3
1,586,358	+		LRK54_RS07365	0.79	+0.7
1,586,358	+		LRK54_RS07365	0.79	-0.5
1,586,358	+		LRK54_RS07365	0.79	-1.4
1,586,358	+		LRK54_RS07365	0.79	-0.3
1,586,358	+		LRK54_RS07365	0.79	+0.7
1,586,358	+		LRK54_RS07365	0.79	+1.7
1,586,358	+		LRK54_RS07365	0.79	+0.7
1,586,358	+		LRK54_RS07365	0.79	-3.4
1,586,358	+		LRK54_RS07365	0.79	-0.1
1,586,358	+		LRK54_RS07365	0.79	-1.7
1,586,358	+		LRK54_RS07365	0.79	-0.7
1,586,358	+		LRK54_RS07365	0.79	-0.3
1,586,358	+		LRK54_RS07365	0.79	+2.3
1,586,358	+		LRK54_RS07365	0.79	-0.5
1,586,358	+		LRK54_RS07365	0.79	+0.7
1,586,358	+		LRK54_RS07365	0.79	-0.3
1,586,358	+		LRK54_RS07365	0.79	-0.3
1,586,359	-		LRK54_RS07365	0.79	-0.3
1,586,359	-		LRK54_RS07365	0.79	-1.3
1,586,359	-		LRK54_RS07365	0.79	+1.1
1,586,359	-		LRK54_RS07365	0.79	-0.1
1,586,359	-		LRK54_RS07365	0.79	-0.7
1,586,359	-		LRK54_RS07365	0.79	-0.0
1,586,359	-		LRK54_RS07365	0.79	-0.2
1,586,359	-		LRK54_RS07365	0.79	-0.1
1,586,359	-		LRK54_RS07365	0.79	+0.1
1,586,359	-		LRK54_RS07365	0.79	-0.3
1,586,359	-		LRK54_RS07365	0.79	+0.1
1,586,359	-		LRK54_RS07365	0.79	+0.7
1,586,359	-		LRK54_RS07365	0.79	+0.2
1,586,359	-		LRK54_RS07365	0.79	+0.4
1,586,359	-		LRK54_RS07365	0.79	-2.1
1,586,359	-		LRK54_RS07365	0.79	+0.1
1,586,359	-		LRK54_RS07365	0.79	+1.3
1,586,359	-		LRK54_RS07365	0.79	-1.0
1,586,446	-		LRK54_RS07365	0.84	+0.7
1,586,446	-		LRK54_RS07365	0.84	-0.8
1,586,446	-		LRK54_RS07365	0.84	+0.3
1,586,464	+		LRK54_RS07365	0.85	-1.3
1,586,464	+		LRK54_RS07365	0.85	-0.2
1,586,464	+		LRK54_RS07365	0.85	+0.4
1,586,464	+		LRK54_RS07365	0.85	-1.2
1,586,464	+		LRK54_RS07365	0.85	+0.6
1,586,464	+		LRK54_RS07365	0.85	-0.3
1,586,464	+		LRK54_RS07365	0.85	+0.7
1,586,464	+		LRK54_RS07365	0.85	+0.4
1,586,464	+		LRK54_RS07365	0.85	-2.1
1,586,464	+		LRK54_RS07365	0.85	-0.4
1,586,464	+		LRK54_RS07365	0.85	-1.0
1,586,464	+		LRK54_RS07365	0.85	-1.4
1,586,464	+		LRK54_RS07365	0.85	-0.2
1,586,464	+		LRK54_RS07365	0.85	-1.9
1,586,464	+		LRK54_RS07365	0.85	-0.6
1,586,464	+		LRK54_RS07365	0.85	-1.2
1,586,465	-		LRK54_RS07365	0.85	+0.2
1,586,465	-		LRK54_RS07365	0.85	+1.3
1,586,465	-		LRK54_RS07365	0.85	+0.1
1,586,465	-		LRK54_RS07365	0.85	-0.7
1,586,465	-		LRK54_RS07365	0.85	+0.3
1,586,465	-		LRK54_RS07365	0.85	+0.7
1,586,465	-		LRK54_RS07365	0.85	+2.3
1,586,465	-		LRK54_RS07365	0.85	-1.3
1,586,465	-		LRK54_RS07365	0.85	-2.1
1,586,465	-		LRK54_RS07365	0.85	+1.1
1,586,465	-		LRK54_RS07365	0.85	+0.7
1,586,465	-		LRK54_RS07365	0.85	+0.7
1,586,465	-		LRK54_RS07365	0.85	-1.3
1,586,465	-		LRK54_RS07365	0.85	-0.1
1,586,465	-		LRK54_RS07365	0.85	+0.2
1,586,465	-		LRK54_RS07365	0.85	-0.3
1,586,465	-		LRK54_RS07365	0.85	-0.7
1,586,465	-		LRK54_RS07365	0.85	-0.1
1,586,465	-		LRK54_RS07365	0.85	+1.7
1,586,465	-		LRK54_RS07365	0.85	-0.0
1,586,465	-		LRK54_RS07365	0.85	-0.7
1,586,465	-		LRK54_RS07365	0.85	-0.6
1,586,465	-		LRK54_RS07365	0.85	-0.5
1,586,568	+				+0.7
1,586,568	+				+0.3
1,586,568	+				+0.2
1,586,568	+				-1.6
1,586,569	-				-0.6
1,586,569	-				+0.0
1,586,569	-				-1.6
1,586,569	-				-0.7
1,586,569	-				-1.1
1,586,569	-				-0.9
1,586,569	-				+0.1
1,586,682	+				-0.3
1,586,682	+				-0.3
1,586,682	+				-1.6
1,586,864	+				+0.3
1,586,865	-				-1.6
1,586,865	-				-0.3
1,586,865	-				-0.3
1,587,001	+		LRK54_RS07370	0.28	+0.3
1,587,001	+		LRK54_RS07370	0.28	+1.0
1,587,001	+		LRK54_RS07370	0.28	+0.7
1,587,001	+		LRK54_RS07370	0.28	-0.7
1,587,001	+		LRK54_RS07370	0.28	+0.3
1,587,001	+		LRK54_RS07370	0.28	-0.2
1,587,001	+		LRK54_RS07370	0.28	+0.7
1,587,001	+		LRK54_RS07370	0.28	-0.7
1,587,002	-		LRK54_RS07370	0.28	+0.3
1,587,002	-		LRK54_RS07370	0.28	+0.7
1,587,002	-		LRK54_RS07370	0.28	-0.3
1,587,002	-		LRK54_RS07370	0.28	-0.6
1,587,002	-		LRK54_RS07370	0.28	+0.2
1,587,002	-		LRK54_RS07370	0.28	-0.8
1,587,002	-		LRK54_RS07370	0.28	+0.7
1,587,002	-		LRK54_RS07370	0.28	-0.3
1,587,107	+		LRK54_RS07370	0.45	+0.1
1,587,108	-		LRK54_RS07370	0.45	-1.7
1,587,108	-		LRK54_RS07370	0.45	+0.5
1,587,108	-		LRK54_RS07370	0.45	+0.3
1,587,108	-		LRK54_RS07370	0.45	-0.9
1,587,108	-		LRK54_RS07370	0.45	-0.0
1,587,108	-		LRK54_RS07370	0.45	+0.4
1,587,108	-		LRK54_RS07370	0.45	-0.3
1,587,108	-		LRK54_RS07370	0.45	-0.2
1,587,108	-		LRK54_RS07370	0.45	-0.9
1,587,108	-		LRK54_RS07370	0.45	+0.1
1,587,228	-		LRK54_RS07370	0.64	+0.7
1,587,236	+		LRK54_RS07370	0.65	+0.1
1,587,314	+		LRK54_RS07370	0.78	+0.7
1,587,371	+		LRK54_RS07370	0.86	-0.4
1,587,371	+		LRK54_RS07370	0.86	-0.3
1,587,371	+		LRK54_RS07370	0.86	-0.9
1,587,371	+		LRK54_RS07370	0.86	-2.1
1,587,371	+		LRK54_RS07370	0.86	+1.7
1,587,371	+		LRK54_RS07370	0.86	+0.7
1,587,372	-		LRK54_RS07370	0.87	+0.8
1,587,372	-		LRK54_RS07370	0.87	-0.3
1,587,372	-		LRK54_RS07370	0.87	-0.6
1,587,372	-		LRK54_RS07370	0.87	-0.1
1,587,372	-		LRK54_RS07370	0.87	+0.7
1,587,372	-		LRK54_RS07370	0.87	+0.7
1,587,372	-		LRK54_RS07370	0.87	-1.3
1,587,372	-		LRK54_RS07370	0.87	-1.6
1,587,372	-		LRK54_RS07370	0.87	+1.3
1,587,372	-		LRK54_RS07370	0.87	-0.3
1,587,470	+				-0.4
1,587,470	+				+0.7
1,587,470	+				+1.4
1,587,470	+				+1.7
1,587,470	+				-1.3
1,587,470	+				-0.3
1,587,470	+				+0.4
1,587,470	+				-0.3
1,587,471	-				+0.2
1,587,471	-				+0.3
1,587,471	-				-1.6
1,587,471	-				-0.5
1,587,471	-				+1.1
1,587,471	-				-0.6
1,587,471	-				-0.9
1,587,471	-				-0.9
1,587,619	+		LRK54_RS07375	0.11	+1.0
1,587,619	+		LRK54_RS07375	0.11	-1.2
1,587,619	+		LRK54_RS07375	0.11	-0.3
1,587,620	-		LRK54_RS07375	0.11	+0.3
1,587,817	+		LRK54_RS07375	0.25	-0.7
1,587,817	+		LRK54_RS07375	0.25	+0.7
1,587,817	+		LRK54_RS07375	0.25	-1.0
1,587,818	-		LRK54_RS07375	0.25	-0.9
1,587,818	-		LRK54_RS07375	0.25	+0.9
1,587,818	-		LRK54_RS07375	0.25	+1.3
1,587,818	-		LRK54_RS07375	0.25	+0.7
1,587,818	-		LRK54_RS07375	0.25	+0.3
1,587,818	-		LRK54_RS07375	0.25	+0.7
1,587,818	-		LRK54_RS07375	0.25	-0.7
1,587,885	+		LRK54_RS07375	0.30	+0.5
1,587,885	+		LRK54_RS07375	0.30	+0.3
1,587,885	+		LRK54_RS07375	0.30	+0.7
1,587,885	+		LRK54_RS07375	0.30	-1.3
1,587,886	-		LRK54_RS07375	0.30	-0.2
1,587,886	-		LRK54_RS07375	0.30	+0.7
1,587,886	-		LRK54_RS07375	0.30	-1.3
1,587,886	-		LRK54_RS07375	0.30	-0.2
1,587,886	-		LRK54_RS07375	0.30	-1.6
1,587,886	-		LRK54_RS07375	0.30	+2.0
1,587,886	-		LRK54_RS07375	0.30	+1.3
1,587,886	-		LRK54_RS07375	0.30	+1.0
1,587,886	-		LRK54_RS07375	0.30	-0.3
1,587,886	-		LRK54_RS07375	0.30	-0.3
1,587,886	-		LRK54_RS07375	0.30	-0.3
1,587,886	-		LRK54_RS07375	0.30	+0.1
1,587,951	+		LRK54_RS07375	0.35	+2.3
1,587,951	+		LRK54_RS07375	0.35	-0.3
1,587,951	+		LRK54_RS07375	0.35	+0.7
1,587,951	+		LRK54_RS07375	0.35	-1.6
1,587,951	+		LRK54_RS07375	0.35	+0.3
1,587,951	+		LRK54_RS07375	0.35	+0.1
1,587,951	+		LRK54_RS07375	0.35	-0.4
1,587,951	+		LRK54_RS07375	0.35	-1.2
1,587,951	+		LRK54_RS07375	0.35	+1.0
1,587,952	-		LRK54_RS07375	0.35	-0.5
1,587,952	-		LRK54_RS07375	0.35	-0.3
1,587,952	-		LRK54_RS07375	0.35	-0.9
1,587,952	-		LRK54_RS07375	0.35	-1.1
1,587,952	-		LRK54_RS07375	0.35	+2.3
1,587,952	-		LRK54_RS07375	0.35	-1.4
1,587,952	-		LRK54_RS07375	0.35	+0.1
1,587,952	-		LRK54_RS07375	0.35	-0.9
1,587,952	-		LRK54_RS07375	0.35	-0.3
1,587,985	+		LRK54_RS07375	0.37	+0.4
1,587,985	+		LRK54_RS07375	0.37	-0.9
1,587,986	-		LRK54_RS07375	0.37	+0.4
1,587,986	-		LRK54_RS07375	0.37	-0.3
1,588,077	+		LRK54_RS07375	0.44	+1.7
1,588,077	+		LRK54_RS07375	0.44	-2.3
1,588,077	+		LRK54_RS07375	0.44	-1.3
1,588,077	+		LRK54_RS07375	0.44	-0.9
1,588,077	+		LRK54_RS07375	0.44	-0.9
1,588,077	+		LRK54_RS07375	0.44	-0.9
1,588,077	+		LRK54_RS07375	0.44	+0.4
1,588,077	+		LRK54_RS07375	0.44	+0.0
1,588,078	-		LRK54_RS07375	0.44	+0.7
1,588,078	-		LRK54_RS07375	0.44	-1.3
1,588,078	-		LRK54_RS07375	0.44	-0.4
1,588,134	+		LRK54_RS07375	0.48	+0.7
1,588,134	+		LRK54_RS07375	0.48	-0.9
1,588,134	+		LRK54_RS07375	0.48	-1.0
1,588,134	+		LRK54_RS07375	0.48	+0.9
1,588,134	+		LRK54_RS07375	0.48	-2.0
1,588,134	+		LRK54_RS07375	0.48	+0.7
1,588,134	+		LRK54_RS07375	0.48	-0.9
1,588,134	+		LRK54_RS07375	0.48	+1.4
1,588,134	+		LRK54_RS07375	0.48	-0.8
1,588,134	+		LRK54_RS07375	0.48	+0.4
1,588,134	+		LRK54_RS07375	0.48	-0.6
1,588,134	+		LRK54_RS07375	0.48	+0.3
1,588,135	-		LRK54_RS07375	0.48	-0.1
1,588,135	-		LRK54_RS07375	0.48	+0.1
1,588,135	-		LRK54_RS07375	0.48	+0.3
1,588,135	-		LRK54_RS07375	0.48	-0.0
1,588,135	-		LRK54_RS07375	0.48	-1.3
1,588,135	-		LRK54_RS07375	0.48	+1.3
1,588,135	-		LRK54_RS07375	0.48	+0.7
1,588,135	-		LRK54_RS07375	0.48	-0.1
1,588,135	-		LRK54_RS07375	0.48	-1.9
1,588,135	-		LRK54_RS07375	0.48	-0.5
1,588,135	-		LRK54_RS07375	0.48	-2.4
1,588,135	-		LRK54_RS07375	0.48	-0.3
1,588,135	-		LRK54_RS07375	0.48	-0.3
1,588,135	-		LRK54_RS07375	0.48	+0.7
1,588,135	-		LRK54_RS07375	0.48	-0.6
1,588,135	-		LRK54_RS07375	0.48	-0.2
1,588,135	-		LRK54_RS07375	0.48	-1.2
1,588,135	-		LRK54_RS07375	0.48	-0.3
1,588,145	+		LRK54_RS07375	0.49	-0.9
1,588,155	+		LRK54_RS07375	0.49	+2.1
1,588,155	+		LRK54_RS07375	0.49	+0.7
1,588,155	+		LRK54_RS07375	0.49	-1.0
1,588,155	+		LRK54_RS07375	0.49	+2.0
1,588,403	+		LRK54_RS07375	0.67	+0.1
1,588,403	+		LRK54_RS07375	0.67	+0.1
1,588,403	+		LRK54_RS07375	0.67	-2.1
1,588,403	+		LRK54_RS07375	0.67	-0.1
1,588,403	+		LRK54_RS07375	0.67	-0.9
1,588,403	+		LRK54_RS07375	0.67	+0.7
1,588,403	+		LRK54_RS07375	0.67	-0.5
1,588,403	+		LRK54_RS07375	0.67	-0.2
1,588,403	+		LRK54_RS07375	0.67	+0.7
1,588,403	+		LRK54_RS07375	0.67	-1.9
1,588,404	-		LRK54_RS07375	0.67	+0.7
1,588,404	-		LRK54_RS07375	0.67	-1.0
1,588,404	-		LRK54_RS07375	0.67	-0.9
1,588,435	-		LRK54_RS07375	0.69	-1.3
1,588,435	-		LRK54_RS07375	0.69	+0.4
1,588,435	-		LRK54_RS07375	0.69	-1.9
1,588,435	-		LRK54_RS07375	0.69	-1.9
1,588,435	-		LRK54_RS07375	0.69	-1.4
1,588,435	-		LRK54_RS07375	0.69	+1.7
1,588,435	-		LRK54_RS07375	0.69	-0.1