Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09830

Experiment: 1C-T1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1C-T1
2,143,799	+		LRK54_RS09820	0.81	-0.4
2,143,799	+		LRK54_RS09820	0.81	-1.2
2,143,799	+		LRK54_RS09820	0.81	-0.4
2,143,799	+		LRK54_RS09820	0.81	-2.0
2,143,799	+		LRK54_RS09820	0.81	+0.0
2,143,799	+		LRK54_RS09820	0.81	-1.4
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-0.4
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-2.4
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-2.6
2,143,799	+		LRK54_RS09820	0.81	-1.3
2,143,799	+		LRK54_RS09820	0.81	-0.1
2,143,799	+		LRK54_RS09820	0.81	+0.0
2,143,799	+		LRK54_RS09820	0.81	-1.2
2,143,799	+		LRK54_RS09820	0.81	-0.2
2,143,799	+		LRK54_RS09820	0.81	+2.2
2,143,799	+		LRK54_RS09820	0.81	-0.2
2,143,799	+		LRK54_RS09820	0.81	-1.5
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-1.1
2,143,799	+		LRK54_RS09820	0.81	+0.1
2,143,799	+		LRK54_RS09820	0.81	-3.1
2,143,799	+		LRK54_RS09820	0.81	-2.2
2,143,799	+		LRK54_RS09820	0.81	-0.9
2,143,799	+		LRK54_RS09820	0.81	-0.1
2,143,799	+		LRK54_RS09820	0.81	-1.0
2,143,799	+		LRK54_RS09820	0.81	-1.0
2,143,799	+		LRK54_RS09820	0.81	+0.0
2,143,799	+		LRK54_RS09820	0.81	-0.3
2,143,799	+		LRK54_RS09820	0.81	-1.8
2,143,799	+		LRK54_RS09820	0.81	+1.0
2,143,799	+		LRK54_RS09820	0.81	-0.4
2,143,799	+		LRK54_RS09820	0.81	+0.2
2,143,799	+		LRK54_RS09820	0.81	-0.8
2,143,799	+		LRK54_RS09820	0.81	-0.5
2,143,799	+		LRK54_RS09820	0.81	+0.6
2,143,799	+		LRK54_RS09820	0.81	-0.7
2,143,799	+		LRK54_RS09820	0.81	-1.2
2,143,799	+		LRK54_RS09820	0.81	-0.7
2,143,799	+		LRK54_RS09820	0.81	-0.3
2,143,799	+		LRK54_RS09820	0.81	+0.3
2,143,799	+		LRK54_RS09820	0.81	-1.4
2,143,799	+		LRK54_RS09820	0.81	-1.0
2,143,799	+		LRK54_RS09820	0.81	-1.0
2,143,799	+		LRK54_RS09820	0.81	+1.6
2,143,800	-		LRK54_RS09820	0.81	-0.7
2,143,800	-		LRK54_RS09820	0.81	-0.7
2,143,800	-		LRK54_RS09820	0.81	-2.0
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	+0.6
2,143,800	-		LRK54_RS09820	0.81	-1.1
2,143,800	-		LRK54_RS09820	0.81	-1.3
2,143,800	-		LRK54_RS09820	0.81	+0.6
2,143,800	-		LRK54_RS09820	0.81	-1.1
2,143,800	-		LRK54_RS09820	0.81	+0.2
2,143,800	-		LRK54_RS09820	0.81	-1.2
2,143,800	-		LRK54_RS09820	0.81	+2.2
2,143,800	-		LRK54_RS09820	0.81	+0.4
2,143,800	-		LRK54_RS09820	0.81	-0.6
2,143,800	-		LRK54_RS09820	0.81	-1.2
2,143,800	-		LRK54_RS09820	0.81	-1.7
2,143,800	-		LRK54_RS09820	0.81	+1.6
2,143,800	-		LRK54_RS09820	0.81	-0.1
2,143,800	-		LRK54_RS09820	0.81	+1.6
2,143,800	-		LRK54_RS09820	0.81	-1.2
2,143,800	-		LRK54_RS09820	0.81	-0.5
2,143,800	-		LRK54_RS09820	0.81	-1.0
2,143,800	-		LRK54_RS09820	0.81	-1.7
2,143,800	-		LRK54_RS09820	0.81	-0.4
2,143,800	-		LRK54_RS09820	0.81	+0.6
2,143,800	-		LRK54_RS09820	0.81	+0.2
2,143,800	-		LRK54_RS09820	0.81	+0.6
2,143,800	-		LRK54_RS09820	0.81	-2.0
2,143,800	-		LRK54_RS09820	0.81	+0.0
2,143,800	-		LRK54_RS09820	0.81	-1.5
2,143,800	-		LRK54_RS09820	0.81	-0.9
2,143,800	-		LRK54_RS09820	0.81	-0.0
2,143,800	-		LRK54_RS09820	0.81	+0.2
2,143,800	-		LRK54_RS09820	0.81	+0.1
2,143,800	-		LRK54_RS09820	0.81	-0.3
2,143,800	-		LRK54_RS09820	0.81	-0.5
2,143,800	-		LRK54_RS09820	0.81	-2.6
2,143,800	-		LRK54_RS09820	0.81	-1.4
2,143,800	-		LRK54_RS09820	0.81	-1.4
2,143,800	-		LRK54_RS09820	0.81	-3.1
2,143,800	-		LRK54_RS09820	0.81	-1.7
2,143,976	+				+0.6
2,143,976	+				-0.4
2,143,976	+				+1.6
2,143,977	-				-1.4
2,144,197	-		LRK54_RS09825	0.21	-2.2
2,144,197	-		LRK54_RS09825	0.21	+0.6
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	-1.4
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	+0.0
2,144,353	+		LRK54_RS09825	0.44	-0.7
2,144,353	+		LRK54_RS09825	0.44	-1.4
2,144,353	+		LRK54_RS09825	0.44	+2.2
2,144,353	+		LRK54_RS09825	0.44	-2.4
2,144,353	+		LRK54_RS09825	0.44	-0.7
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	-1.1
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	-0.4
2,144,353	+		LRK54_RS09825	0.44	-0.4
2,144,353	+		LRK54_RS09825	0.44	-0.6
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	+0.6
2,144,353	+		LRK54_RS09825	0.44	-1.7
2,144,354	-		LRK54_RS09825	0.44	-0.4
2,144,354	-		LRK54_RS09825	0.44	-1.3
2,144,354	-		LRK54_RS09825	0.44	-1.7
2,144,354	-		LRK54_RS09825	0.44	+0.6
2,144,354	-		LRK54_RS09825	0.44	-1.2
2,144,354	-		LRK54_RS09825	0.44	-0.7
2,144,354	-		LRK54_RS09825	0.44	+0.6
2,144,354	-		LRK54_RS09825	0.44	-0.4
2,144,354	-		LRK54_RS09825	0.44	-0.2
2,144,354	-		LRK54_RS09825	0.44	+1.6
2,144,354	-		LRK54_RS09825	0.44	+0.0
2,144,354	-		LRK54_RS09825	0.44	+0.6
2,144,354	-		LRK54_RS09825	0.44	+0.2
2,144,354	-		LRK54_RS09825	0.44	-0.4
2,144,354	-		LRK54_RS09825	0.44	-1.7
2,144,354	-		LRK54_RS09825	0.44	-1.4
2,144,354	-		LRK54_RS09825	0.44	-0.4
2,144,354	-		LRK54_RS09825	0.44	+0.6
2,144,461	+		LRK54_RS09825	0.60	-2.9
2,144,461	+		LRK54_RS09825	0.60	-0.7
2,144,461	+		LRK54_RS09825	0.60	-1.7
2,144,461	+		LRK54_RS09825	0.60	+0.0
2,144,461	+		LRK54_RS09825	0.60	+0.6
2,144,461	+		LRK54_RS09825	0.60	+0.2
2,144,461	+		LRK54_RS09825	0.60	-0.1
2,144,461	+		LRK54_RS09825	0.60	+0.6
2,144,461	+		LRK54_RS09825	0.60	+0.6
2,144,461	+		LRK54_RS09825	0.60	-1.0
2,144,461	+		LRK54_RS09825	0.60	+0.6
2,144,461	+		LRK54_RS09825	0.60	+0.6
2,144,461	+		LRK54_RS09825	0.60	-1.4
2,144,461	+		LRK54_RS09825	0.60	+0.0
2,144,462	-		LRK54_RS09825	0.60	+1.6
2,144,462	-		LRK54_RS09825	0.60	-1.7
2,144,462	-		LRK54_RS09825	0.60	-0.4
2,144,462	-		LRK54_RS09825	0.60	+1.6
2,144,462	-		LRK54_RS09825	0.60	+0.6
2,144,462	-		LRK54_RS09825	0.60	+0.6
2,144,462	-		LRK54_RS09825	0.60	+0.6
2,144,462	-		LRK54_RS09825	0.60	-2.0
2,144,462	-		LRK54_RS09825	0.60	-0.4
2,144,462	-		LRK54_RS09825	0.60	-1.0
2,144,462	-		LRK54_RS09825	0.60	-0.4
2,144,462	-		LRK54_RS09825	0.60	-1.0
2,144,462	-		LRK54_RS09825	0.60	-0.4
2,144,750	+				-0.4
2,144,751	-				-0.4
2,144,751	-				-0.4
2,144,940	+		LRK54_RS09830	0.26	-0.4
2,144,940	+		LRK54_RS09830	0.26	-0.1
2,144,940	+		LRK54_RS09830	0.26	-0.3
2,144,940	+		LRK54_RS09830	0.26	-0.6
2,144,940	+		LRK54_RS09830	0.26	-0.8
2,144,940	+		LRK54_RS09830	0.26	+0.6
2,144,940	+		LRK54_RS09830	0.26	+0.2
2,144,940	+		LRK54_RS09830	0.26	-0.4
2,144,940	+		LRK54_RS09830	0.26	+1.1
2,144,940	+		LRK54_RS09830	0.26	-1.5
2,144,940	+		LRK54_RS09830	0.26	-1.8
2,144,940	+		LRK54_RS09830	0.26	+0.2
2,144,940	+		LRK54_RS09830	0.26	-0.1
2,144,940	+		LRK54_RS09830	0.26	+0.3
2,144,940	+		LRK54_RS09830	0.26	+1.6
2,144,940	+		LRK54_RS09830	0.26	-0.2
2,144,941	-		LRK54_RS09830	0.26	-0.4
2,144,941	-		LRK54_RS09830	0.26	-1.7
2,144,941	-		LRK54_RS09830	0.26	+0.0
2,144,941	-		LRK54_RS09830	0.26	-0.3
2,144,941	-		LRK54_RS09830	0.26	+0.4
2,144,941	-		LRK54_RS09830	0.26	-0.2
2,144,941	-		LRK54_RS09830	0.26	+0.0
2,144,941	-		LRK54_RS09830	0.26	+1.4
2,144,941	-		LRK54_RS09830	0.26	+0.1
2,144,941	-		LRK54_RS09830	0.26	+1.2
2,144,941	-		LRK54_RS09830	0.26	-0.9
2,144,941	-		LRK54_RS09830	0.26	-1.0
2,144,941	-		LRK54_RS09830	0.26	-0.1
2,144,941	-		LRK54_RS09830	0.26	+0.6
2,144,941	-		LRK54_RS09830	0.26	+0.3
2,144,941	-		LRK54_RS09830	0.26	-2.3
2,144,941	-		LRK54_RS09830	0.26	+0.3
2,144,941	-		LRK54_RS09830	0.26	-1.0
2,144,941	-		LRK54_RS09830	0.26	+0.6
2,144,941	-		LRK54_RS09830	0.26	-0.4
2,144,941	-		LRK54_RS09830	0.26	+0.2
2,144,994	+		LRK54_RS09830	0.35	-0.9
2,145,087	+		LRK54_RS09830	0.51	-1.0
2,145,087	+		LRK54_RS09830	0.51	-2.4
2,145,087	+		LRK54_RS09830	0.51	-1.1
2,145,087	+		LRK54_RS09830	0.51	+0.0
2,145,087	+		LRK54_RS09830	0.51	+0.3
2,145,087	+		LRK54_RS09830	0.51	+0.6
2,145,088	-		LRK54_RS09830	0.51	-0.6
2,145,088	-		LRK54_RS09830	0.51	+1.2
2,145,088	-		LRK54_RS09830	0.51	-1.0
2,145,088	-		LRK54_RS09830	0.51	-0.7
2,145,088	-		LRK54_RS09830	0.51	+0.6
2,145,088	-		LRK54_RS09830	0.51	+0.3
2,145,088	-		LRK54_RS09830	0.51	-1.0
2,145,162	+		LRK54_RS09830	0.63	-0.7
2,145,162	+		LRK54_RS09830	0.63	-1.5
2,145,162	+		LRK54_RS09830	0.63	-0.1
2,145,162	+		LRK54_RS09830	0.63	+0.8
2,145,162	+		LRK54_RS09830	0.63	+0.6
2,145,163	-		LRK54_RS09830	0.63	+2.2
2,145,163	-		LRK54_RS09830	0.63	-0.4
2,145,163	-		LRK54_RS09830	0.63	+0.6
2,145,163	-		LRK54_RS09830	0.63	-2.0
2,145,192	+		LRK54_RS09830	0.68	-0.1
2,145,192	+		LRK54_RS09830	0.68	-1.1
2,145,192	+		LRK54_RS09830	0.68	-0.0
2,145,192	+		LRK54_RS09830	0.68	-0.4
2,145,192	+		LRK54_RS09830	0.68	-0.4
2,145,192	+		LRK54_RS09830	0.68	-1.4
2,145,192	+		LRK54_RS09830	0.68	+0.0
2,145,192	+		LRK54_RS09830	0.68	+1.6
2,145,193	-		LRK54_RS09830	0.68	-0.6
2,145,193	-		LRK54_RS09830	0.68	-1.0
2,145,193	-		LRK54_RS09830	0.68	+0.3
2,145,193	-		LRK54_RS09830	0.68	+0.6
2,145,193	-		LRK54_RS09830	0.68	+0.6
2,145,193	-		LRK54_RS09830	0.68	-1.2
2,145,193	-		LRK54_RS09830	0.68	-0.8
2,145,193	-		LRK54_RS09830	0.68	+0.1
2,145,193	-		LRK54_RS09830	0.68	-0.6
2,145,193	-		LRK54_RS09830	0.68	+0.2
2,145,281	-		LRK54_RS09830	0.83	+2.4
2,145,575	+				+0.6
2,145,575	+				-1.4
2,145,575	+				-0.6
2,145,575	+				+0.1
2,145,575	+				-0.4
2,145,575	+				+0.6
2,145,575	+				-1.0
2,145,575	+				+1.7
2,145,575	+				-0.4
2,145,575	+				-1.3
2,145,575	+				-0.7
2,145,575	+				-0.4
2,145,575	+				+0.6
2,145,575	+				-1.7
2,145,576	-				+2.2
2,145,576	-				-0.9
2,145,576	-				-1.7
2,145,576	-				-1.4
2,145,576	-				+0.6
2,145,576	-				-1.7
2,145,576	-				-1.0
2,145,576	-				-0.3
2,145,576	-				-0.6
2,145,576	-				-1.0
2,145,576	-				-1.4
2,145,576	-				-0.4
2,145,576	-				-0.8
2,145,576	-				-0.7
2,145,576	-				+0.2
2,145,576	-				-0.2
2,145,576	-				-0.1
2,145,576	-				+0.3
2,145,576	-				+0.6
2,145,576	-				+0.3
2,145,680	+		LRK54_RS09835	0.20	+0.6
2,145,680	+		LRK54_RS09835	0.20	+0.6
2,145,680	+		LRK54_RS09835	0.20	-1.4
2,145,680	+		LRK54_RS09835	0.20	-1.7
2,145,681	-		LRK54_RS09835	0.20	+0.6
2,145,681	-		LRK54_RS09835	0.20	+0.6
2,145,681	-		LRK54_RS09835	0.20	+0.6
2,145,809	+		LRK54_RS09835	0.45	-0.4
2,145,809	+		LRK54_RS09835	0.45	-1.7
2,145,809	+		LRK54_RS09835	0.45	+0.0
2,145,809	+		LRK54_RS09835	0.45	+0.6
2,145,809	+		LRK54_RS09835	0.45	-1.0
2,145,809	+		LRK54_RS09835	0.45	+0.6
2,145,809	+		LRK54_RS09835	0.45	+1.2
2,145,809	+		LRK54_RS09835	0.45	-0.4
2,145,809	+		LRK54_RS09835	0.45	-1.0
2,145,809	+		LRK54_RS09835	0.45	+0.6
2,145,809	+		LRK54_RS09835	0.45	-0.4
2,145,809	+		LRK54_RS09835	0.45	+0.6
2,145,809	+		LRK54_RS09835	0.45	-1.7
2,145,810	-		LRK54_RS09835	0.45	+0.6
2,145,810	-		LRK54_RS09835	0.45	-2.7
2,145,810	-		LRK54_RS09835	0.45	-1.0
2,145,810	-		LRK54_RS09835	0.45	+0.6
2,145,810	-		LRK54_RS09835	0.45	-1.4
2,145,810	-		LRK54_RS09835	0.45	+1.2
2,145,810	-		LRK54_RS09835	0.45	-1.0
2,145,810	-		LRK54_RS09835	0.45	+1.6
2,145,810	-		LRK54_RS09835	0.45	+1.6
2,145,810	-		LRK54_RS09835	0.45	-0.7
2,145,810	-		LRK54_RS09835	0.45	-0.4
2,145,810	-		LRK54_RS09835	0.45	+1.2
2,145,810	-		LRK54_RS09835	0.45	+0.6
2,145,810	-		LRK54_RS09835	0.45	-1.0
2,145,810	-		LRK54_RS09835	0.45	-1.0
2,145,810	-		LRK54_RS09835	0.45	+0.6
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