Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06710

Experiment: 1B-T1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1B-T1
1,442,115	+		LRK54_RS06705	0.17	-1.6
1,442,115	+		LRK54_RS06705	0.17	-0.6
1,442,115	+		LRK54_RS06705	0.17	-0.0
1,442,116	-		LRK54_RS06705	0.17	-1.6
1,442,116	-		LRK54_RS06705	0.17	-0.5
1,442,116	-		LRK54_RS06705	0.17	-0.6
1,442,116	-		LRK54_RS06705	0.17	-1.0
1,442,116	-		LRK54_RS06705	0.17	-2.5
1,442,205	+		LRK54_RS06705	0.25	-0.0
1,442,205	+		LRK54_RS06705	0.25	-0.4
1,442,205	+		LRK54_RS06705	0.25	-0.0
1,442,205	+		LRK54_RS06705	0.25	-0.0
1,442,205	+		LRK54_RS06705	0.25	+1.0
1,442,205	+		LRK54_RS06705	0.25	-0.1
1,442,205	+		LRK54_RS06705	0.25	-0.2
1,442,205	+		LRK54_RS06705	0.25	-0.0
1,442,205	+		LRK54_RS06705	0.25	-0.3
1,442,205	+		LRK54_RS06705	0.25	-0.4
1,442,205	+		LRK54_RS06705	0.25	-1.6
1,442,205	+		LRK54_RS06705	0.25	-2.5
1,442,205	+		LRK54_RS06705	0.25	-1.4
1,442,206	-		LRK54_RS06705	0.25	-0.0
1,442,206	-		LRK54_RS06705	0.25	-0.6
1,442,206	-		LRK54_RS06705	0.25	+0.4
1,442,206	-		LRK54_RS06705	0.25	-2.2
1,442,206	-		LRK54_RS06705	0.25	-0.0
1,442,206	-		LRK54_RS06705	0.25	-0.6
1,442,206	-		LRK54_RS06705	0.25	-0.8
1,442,206	-		LRK54_RS06705	0.25	+1.0
1,442,206	-		LRK54_RS06705	0.25	-2.5
1,442,206	-		LRK54_RS06705	0.25	-0.0
1,442,206	-		LRK54_RS06705	0.25	+0.1
1,442,206	-		LRK54_RS06705	0.25	-1.0
1,442,206	-		LRK54_RS06705	0.25	+0.5
1,442,206	-		LRK54_RS06705	0.25	+1.0
1,442,274	+		LRK54_RS06705	0.31	+1.0
1,442,274	+		LRK54_RS06705	0.31	+1.0
1,442,274	+		LRK54_RS06705	0.31	-0.8
1,442,274	+		LRK54_RS06705	0.31	-1.0
1,442,274	+		LRK54_RS06705	0.31	+1.4
1,442,274	+		LRK54_RS06705	0.31	-0.4
1,442,274	+		LRK54_RS06705	0.31	-0.0
1,442,274	+		LRK54_RS06705	0.31	+1.0
1,442,275	-		LRK54_RS06705	0.31	-0.6
1,442,275	-		LRK54_RS06705	0.31	-0.0
1,442,424	+		LRK54_RS06705	0.44	-0.6
1,442,424	+		LRK54_RS06705	0.44	-0.0
1,442,424	+		LRK54_RS06705	0.44	+1.0
1,442,424	+		LRK54_RS06705	0.44	-0.6
1,442,424	+		LRK54_RS06705	0.44	-0.6
1,442,424	+		LRK54_RS06705	0.44	-0.0
1,442,424	+		LRK54_RS06705	0.44	-0.6
1,442,424	+		LRK54_RS06705	0.44	+0.2
1,442,424	+		LRK54_RS06705	0.44	-0.8
1,442,424	+		LRK54_RS06705	0.44	-0.0
1,442,425	-		LRK54_RS06705	0.44	-1.0
1,442,425	-		LRK54_RS06705	0.44	-0.0
1,442,425	-		LRK54_RS06705	0.44	-0.5
1,442,425	-		LRK54_RS06705	0.44	+1.2
1,442,425	-		LRK54_RS06705	0.44	+1.0
1,442,425	-		LRK54_RS06705	0.44	-0.6
1,442,466	+		LRK54_RS06705	0.47	-0.5
1,442,466	+		LRK54_RS06705	0.47	-1.0
1,442,466	+		LRK54_RS06705	0.47	+1.4
1,442,466	+		LRK54_RS06705	0.47	-0.0
1,442,466	+		LRK54_RS06705	0.47	-0.6
1,442,466	+		LRK54_RS06705	0.47	-0.7
1,442,466	+		LRK54_RS06705	0.47	-0.4
1,442,466	+		LRK54_RS06705	0.47	+0.4
1,442,466	+		LRK54_RS06705	0.47	-1.4
1,442,466	+		LRK54_RS06705	0.47	-2.5
1,442,466	+		LRK54_RS06705	0.47	+0.6
1,442,466	+		LRK54_RS06705	0.47	-0.0
1,442,466	+		LRK54_RS06705	0.47	-0.0
1,442,466	+		LRK54_RS06705	0.47	+0.1
1,442,466	+		LRK54_RS06705	0.47	-1.4
1,442,466	+		LRK54_RS06705	0.47	+1.0
1,442,466	+		LRK54_RS06705	0.47	-1.1
1,442,466	+		LRK54_RS06705	0.47	-0.6
1,442,466	+		LRK54_RS06705	0.47	-0.4
1,442,466	+		LRK54_RS06705	0.47	-1.4
1,442,466	+		LRK54_RS06705	0.47	-0.0
1,442,466	+		LRK54_RS06705	0.47	+0.4
1,442,466	+		LRK54_RS06705	0.47	-0.0
1,442,466	+		LRK54_RS06705	0.47	+1.4
1,442,467	-		LRK54_RS06705	0.47	-1.2
1,442,467	-		LRK54_RS06705	0.47	+0.5
1,442,467	-		LRK54_RS06705	0.47	-1.2
1,442,467	-		LRK54_RS06705	0.47	+0.4
1,442,467	-		LRK54_RS06705	0.47	-0.5
1,442,467	-		LRK54_RS06705	0.47	-0.5
1,442,467	-		LRK54_RS06705	0.47	-0.6
1,442,467	-		LRK54_RS06705	0.47	+2.0
1,442,467	-		LRK54_RS06705	0.47	+0.4
1,442,467	-		LRK54_RS06705	0.47	-1.8
1,442,467	-		LRK54_RS06705	0.47	-0.6
1,442,467	-		LRK54_RS06705	0.47	-0.0
1,442,467	-		LRK54_RS06705	0.47	-0.4
1,442,467	-		LRK54_RS06705	0.47	-0.2
1,442,467	-		LRK54_RS06705	0.47	-1.0
1,442,467	-		LRK54_RS06705	0.47	-1.2
1,442,467	-		LRK54_RS06705	0.47	-1.3
1,442,467	-		LRK54_RS06705	0.47	+1.5
1,442,467	-		LRK54_RS06705	0.47	+0.9
1,442,467	-		LRK54_RS06705	0.47	-0.6
1,442,467	-		LRK54_RS06705	0.47	-0.0
1,442,467	-		LRK54_RS06705	0.47	+1.0
1,442,565	+		LRK54_RS06705	0.56	-1.6
1,442,565	+		LRK54_RS06705	0.56	-1.8
1,442,565	+		LRK54_RS06705	0.56	-0.5
1,442,565	+		LRK54_RS06705	0.56	-0.2
1,442,566	-		LRK54_RS06705	0.56	-0.1
1,442,566	-		LRK54_RS06705	0.56	-1.2
1,442,656	+		LRK54_RS06705	0.64	+0.5
1,442,656	+		LRK54_RS06705	0.64	+0.2
1,442,656	+		LRK54_RS06705	0.64	+0.0
1,442,656	+		LRK54_RS06705	0.64	-1.0
1,442,656	+		LRK54_RS06705	0.64	-0.6
1,442,656	+		LRK54_RS06705	0.64	-1.1
1,442,656	+		LRK54_RS06705	0.64	+1.0
1,442,656	+		LRK54_RS06705	0.64	-1.0
1,442,656	+		LRK54_RS06705	0.64	-2.0
1,442,656	+		LRK54_RS06705	0.64	-0.0
1,442,656	+		LRK54_RS06705	0.64	-1.9
1,442,656	+		LRK54_RS06705	0.64	+1.5
1,442,657	-		LRK54_RS06705	0.64	-0.6
1,442,657	-		LRK54_RS06705	0.64	-0.6
1,442,657	-		LRK54_RS06705	0.64	-0.6
1,442,657	-		LRK54_RS06705	0.64	+0.7
1,442,657	-		LRK54_RS06705	0.64	-1.6
1,442,713	+		LRK54_RS06705	0.68	-0.2
1,442,713	+		LRK54_RS06705	0.68	+1.3
1,442,713	+		LRK54_RS06705	0.68	-0.0
1,442,713	+		LRK54_RS06705	0.68	+0.1
1,442,713	+		LRK54_RS06705	0.68	-0.2
1,442,714	-		LRK54_RS06705	0.69	+0.7
1,442,714	-		LRK54_RS06705	0.69	+1.2
1,442,714	-		LRK54_RS06705	0.69	-0.6
1,442,714	-		LRK54_RS06705	0.69	+0.4
1,442,714	-		LRK54_RS06705	0.69	-0.0
1,442,714	-		LRK54_RS06705	0.69	+0.6
1,442,714	-		LRK54_RS06705	0.69	-2.2
1,442,714	-		LRK54_RS06705	0.69	-1.6
1,442,763	+		LRK54_RS06705	0.73	+1.0
1,442,764	-		LRK54_RS06705	0.73	-1.0
1,442,764	-		LRK54_RS06705	0.73	-1.3
1,442,764	-		LRK54_RS06705	0.73	-0.0
1,442,764	-		LRK54_RS06705	0.73	-0.6
1,442,764	-		LRK54_RS06705	0.73	-1.8
1,442,764	-		LRK54_RS06705	0.73	+0.1
1,442,764	-		LRK54_RS06705	0.73	-0.6
1,442,766	+		LRK54_RS06705	0.73	-1.2
1,442,766	+		LRK54_RS06705	0.73	+0.1
1,442,766	+		LRK54_RS06705	0.73	-1.4
1,442,766	+		LRK54_RS06705	0.73	+0.5
1,442,766	+		LRK54_RS06705	0.73	+0.3
1,442,766	+		LRK54_RS06705	0.73	+2.0
1,442,766	+		LRK54_RS06705	0.73	+1.0
1,442,766	+		LRK54_RS06705	0.73	+1.0
1,442,766	+		LRK54_RS06705	0.73	-1.7
1,442,766	+		LRK54_RS06705	0.73	-0.4
1,442,766	+		LRK54_RS06705	0.73	+1.0
1,442,766	+		LRK54_RS06705	0.73	-1.0
1,442,766	+		LRK54_RS06705	0.73	+1.0
1,442,766	+		LRK54_RS06705	0.73	-0.4
1,442,766	+		LRK54_RS06705	0.73	-0.2
1,442,766	+		LRK54_RS06705	0.73	-0.6
1,442,766	+		LRK54_RS06705	0.73	-0.0
1,442,766	+		LRK54_RS06705	0.73	+1.0
1,442,766	+		LRK54_RS06705	0.73	-1.2
1,442,767	-		LRK54_RS06705	0.73	-1.5
1,442,767	-		LRK54_RS06705	0.73	-0.6
1,442,767	-		LRK54_RS06705	0.73	+1.3
1,442,767	-		LRK54_RS06705	0.73	+1.0
1,442,767	-		LRK54_RS06705	0.73	+0.7
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	-1.3
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	-1.0
1,442,767	-		LRK54_RS06705	0.73	-1.0
1,442,767	-		LRK54_RS06705	0.73	-0.6
1,442,767	-		LRK54_RS06705	0.73	-0.3
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	-0.8
1,442,767	-		LRK54_RS06705	0.73	-1.1
1,442,767	-		LRK54_RS06705	0.73	+1.0
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	-1.4
1,442,767	-		LRK54_RS06705	0.73	+1.0
1,442,767	-		LRK54_RS06705	0.73	+1.0
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	-0.0
1,442,767	-		LRK54_RS06705	0.73	+0.4
1,442,767	-		LRK54_RS06705	0.73	-0.6
1,443,012	+				+1.0
1,443,012	+				-1.0
1,443,012	+				-0.0
1,443,012	+				-0.6
1,443,012	+				-0.0
1,443,012	+				-0.6
1,443,012	+				-0.3
1,443,012	+				+1.0
1,443,012	+				+0.4
1,443,013	-				+0.5
1,443,013	-				-0.5
1,443,013	-				-1.6
1,443,013	-				-2.5
1,443,013	-				-0.3
1,443,013	-				-0.0
1,443,013	-				-0.0
1,443,013	-				-0.8
1,443,013	-				-0.0
1,443,013	-				+1.0
1,443,013	-				-0.6
1,443,064	+				-0.6
1,443,064	+				+0.5
1,443,064	+				-1.8
1,443,064	+				-0.0
1,443,064	+				+1.5
1,443,064	+				-0.8
1,443,064	+				-0.2
1,443,064	+				+1.0
1,443,064	+				+1.0
1,443,064	+				-0.4
1,443,064	+				+1.0
1,443,064	+				+1.5
1,443,064	+				-1.0
1,443,064	+				-0.6
1,443,065	-				-1.0
1,443,065	-				-0.0
1,443,065	-				-0.6
1,443,065	-				+0.2
1,443,065	-				+1.0
1,443,065	-				+0.5
1,443,065	-				+1.0
1,443,065	-				-0.0
1,443,065	-				-0.6
1,443,065	-				-0.3
1,443,065	-				-0.0
1,443,065	-				+0.1
1,443,065	-				-0.6
1,443,065	-				+1.0
1,443,065	-				-0.0
1,443,116	+				+0.5
1,443,116	+				-1.4
1,443,116	+				-0.3
1,443,116	+				-1.7
1,443,116	+				+0.8
1,443,116	+				-1.0
1,443,116	+				-2.1
1,443,116	+				+1.0
1,443,117	-				+0.2
1,443,117	-				-1.0
1,443,117	-				+1.0
1,443,117	-				+1.0
1,443,117	-				-0.0
1,443,128	+				-0.4
1,443,129	-				-0.0
1,443,129	-				-0.4
1,443,129	-				+1.0
1,443,143	+				-0.0
1,443,143	+				+1.0
1,443,143	+				-2.4
1,443,143	+				+1.0
1,443,143	+				-1.7
1,443,143	+				-1.4
1,443,143	+				+1.0
1,443,143	+				-1.5
1,443,143	+				-1.0
1,443,144	-				-0.5
1,443,144	-				-1.6
1,443,144	-				+1.0
1,443,144	-				+1.0
1,443,144	-				+1.0
1,443,144	-				-0.4
1,443,144	-				+1.0
1,443,144	-				-0.4
1,443,144	-				-1.0
1,443,144	-				-0.0
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	+0.5
1,443,209	+		LRK54_RS06710	0.16	-0.1
1,443,209	+		LRK54_RS06710	0.16	+1.0
1,443,209	+		LRK54_RS06710	0.16	-0.5
1,443,209	+		LRK54_RS06710	0.16	-0.8
1,443,209	+		LRK54_RS06710	0.16	-2.0
1,443,209	+		LRK54_RS06710	0.16	+0.4
1,443,209	+		LRK54_RS06710	0.16	-0.7
1,443,209	+		LRK54_RS06710	0.16	-0.9
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	+1.0
1,443,209	+		LRK54_RS06710	0.16	+0.2
1,443,209	+		LRK54_RS06710	0.16	+0.5
1,443,209	+		LRK54_RS06710	0.16	-0.5
1,443,209	+		LRK54_RS06710	0.16	-0.5
1,443,209	+		LRK54_RS06710	0.16	-0.6
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	-0.3
1,443,209	+		LRK54_RS06710	0.16	+2.0
1,443,209	+		LRK54_RS06710	0.16	-1.3
1,443,209	+		LRK54_RS06710	0.16	+1.0
1,443,209	+		LRK54_RS06710	0.16	-0.4
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	-0.6
1,443,209	+		LRK54_RS06710	0.16	-1.4
1,443,209	+		LRK54_RS06710	0.16	-0.6
1,443,209	+		LRK54_RS06710	0.16	+0.5
1,443,209	+		LRK54_RS06710	0.16	-0.9
1,443,209	+		LRK54_RS06710	0.16	-1.7
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	-0.0
1,443,209	+		LRK54_RS06710	0.16	-0.2
1,443,209	+		LRK54_RS06710	0.16	+0.5
1,443,210	-		LRK54_RS06710	0.16	-0.6
1,443,210	-		LRK54_RS06710	0.16	-0.0
1,443,210	-		LRK54_RS06710	0.16	-2.4
1,443,210	-		LRK54_RS06710	0.16	-1.0
1,443,210	-		LRK54_RS06710	0.16	-2.5
1,443,210	-		LRK54_RS06710	0.16	-1.5
1,443,210	-		LRK54_RS06710	0.16	-0.0
1,443,210	-		LRK54_RS06710	0.16	-1.5
1,443,210	-		LRK54_RS06710	0.16	-0.6
1,443,210	-		LRK54_RS06710	0.16	+1.5
1,443,210	-		LRK54_RS06710	0.16	-0.6
1,443,210	-		LRK54_RS06710	0.16	-1.8
1,443,210	-		LRK54_RS06710	0.16	-2.6
1,443,210	-		LRK54_RS06710	0.16	-0.0
1,443,210	-		LRK54_RS06710	0.16	-0.7
1,443,210	-		LRK54_RS06710	0.16	-0.4
1,443,210	-		LRK54_RS06710	0.16	-0.0
1,443,210	-		LRK54_RS06710	0.16	+0.5
1,443,210	-		LRK54_RS06710	0.16	-0.9
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