Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04135 and H281DRAFT_04136 overlap by 55 nucleotides H281DRAFT_04136 and H281DRAFT_04137 are separated by 54 nucleotides H281DRAFT_04137 and H281DRAFT_04138 are separated by 71 nucleotides
H281DRAFT_04135: H281DRAFT_04135 - Pyridoxamine 5'-phosphate oxidase, at 246,468 to 247,109
_04135
H281DRAFT_04136: H281DRAFT_04136 - hypothetical protein, at 247,055 to 247,198
_04136
H281DRAFT_04137: H281DRAFT_04137 - cyclopropane-fatty-acyl-phospholipid synthase, at 247,253 to 248,467
_04137
H281DRAFT_04138: H281DRAFT_04138 - Uncharacterized conserved protein YecE, DUF72 family, at 248,539 to 249,945
_04138
Position (kb) 247
248
249 Strain fitness (log2 ratio) -2
-1
0
1 at 246.430 kb on + strand at 246.430 kb on + strand at 246.430 kb on + strand at 246.431 kb on - strand at 246.434 kb on + strand at 246.434 kb on + strand at 246.434 kb on + strand at 246.434 kb on + strand at 246.434 kb on + strand at 246.434 kb on + strand at 246.434 kb on + strand at 246.435 kb on - strand at 246.435 kb on - strand at 246.435 kb on - strand at 246.435 kb on - strand at 246.435 kb on - strand at 247.227 kb on + strand at 247.311 kb on + strand at 247.311 kb on + strand at 247.312 kb on - strand at 247.312 kb on - strand at 247.412 kb on + strand, within H281DRAFT_04137 at 247.413 kb on - strand, within H281DRAFT_04137 at 247.413 kb on - strand at 247.451 kb on + strand, within H281DRAFT_04137 at 247.451 kb on + strand, within H281DRAFT_04137 at 247.525 kb on + strand, within H281DRAFT_04137 at 247.565 kb on + strand, within H281DRAFT_04137 at 247.608 kb on - strand, within H281DRAFT_04137 at 247.613 kb on + strand, within H281DRAFT_04137 at 247.634 kb on + strand, within H281DRAFT_04137 at 247.634 kb on + strand, within H281DRAFT_04137 at 247.634 kb on + strand, within H281DRAFT_04137 at 247.634 kb on + strand, within H281DRAFT_04137 at 247.634 kb on + strand, within H281DRAFT_04137 at 247.635 kb on - strand, within H281DRAFT_04137 at 247.635 kb on - strand, within H281DRAFT_04137 at 247.635 kb on - strand, within H281DRAFT_04137 at 247.665 kb on - strand, within H281DRAFT_04137 at 247.676 kb on + strand, within H281DRAFT_04137 at 247.677 kb on - strand, within H281DRAFT_04137 at 248.016 kb on - strand, within H281DRAFT_04137 at 248.135 kb on + strand, within H281DRAFT_04137 at 248.136 kb on - strand, within H281DRAFT_04137 at 248.136 kb on - strand, within H281DRAFT_04137 at 248.237 kb on + strand, within H281DRAFT_04137 at 248.337 kb on - strand, within H281DRAFT_04137 at 248.337 kb on - strand, within H281DRAFT_04137 at 248.384 kb on + strand at 248.385 kb on - strand at 248.394 kb on + strand at 248.445 kb on - strand at 248.445 kb on - strand at 248.450 kb on + strand at 248.515 kb on + strand at 248.624 kb on + strand at 248.625 kb on - strand at 249.073 kb on + strand, within H281DRAFT_04138 at 249.073 kb on + strand, within H281DRAFT_04138 at 249.073 kb on + strand, within H281DRAFT_04138 at 249.074 kb on - strand, within H281DRAFT_04138 at 249.161 kb on - strand, within H281DRAFT_04138 at 249.225 kb on + strand, within H281DRAFT_04138 at 249.437 kb on + strand, within H281DRAFT_04138 at 249.437 kb on + strand, within H281DRAFT_04138 at 249.437 kb on + strand, within H281DRAFT_04138 at 249.438 kb on - strand, within H281DRAFT_04138
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 246,430 + +0.7 246,430 + +0.7 246,430 + -0.0 246,431 - -0.7 246,434 + +0.2 246,434 + +1.5 246,434 + +0.4 246,434 + +1.6 246,434 + +1.0 246,434 + +0.5 246,434 + -0.2 246,435 - +1.0 246,435 - -0.9 246,435 - -0.3 246,435 - -0.4 246,435 - -0.7 247,227 + +1.0 247,311 + -0.9 247,311 + -1.1 247,312 - -1.3 247,312 - -0.7 247,412 + H281DRAFT_04137 0.13 -1.4 247,413 - H281DRAFT_04137 0.13 +0.2 247,413 - +0.0 247,451 + H281DRAFT_04137 0.16 -0.3 247,451 + H281DRAFT_04137 0.16 -0.8 247,525 + H281DRAFT_04137 0.22 -0.7 247,565 + H281DRAFT_04137 0.26 -1.8 247,608 - H281DRAFT_04137 0.29 -1.1 247,613 + H281DRAFT_04137 0.30 -1.6 247,634 + H281DRAFT_04137 0.31 -0.7 247,634 + H281DRAFT_04137 0.31 -0.6 247,634 + H281DRAFT_04137 0.31 +0.0 247,634 + H281DRAFT_04137 0.31 -1.2 247,634 + H281DRAFT_04137 0.31 +0.0 247,635 - H281DRAFT_04137 0.31 -0.6 247,635 - H281DRAFT_04137 0.31 -1.4 247,635 - H281DRAFT_04137 0.31 -1.3 247,665 - H281DRAFT_04137 0.34 -1.2 247,676 + H281DRAFT_04137 0.35 -0.5 247,677 - H281DRAFT_04137 0.35 -0.6 248,016 - H281DRAFT_04137 0.63 -0.4 248,135 + H281DRAFT_04137 0.73 -2.1 248,136 - H281DRAFT_04137 0.73 -1.5 248,136 - H281DRAFT_04137 0.73 -1.0 248,237 + H281DRAFT_04137 0.81 -0.4 248,337 - H281DRAFT_04137 0.89 -1.2 248,337 - H281DRAFT_04137 0.89 -0.5 248,384 + -1.8 248,385 - -0.9 248,394 + -0.6 248,445 - -0.9 248,445 - -0.7 248,450 + -1.2 248,515 + +1.5 248,624 + -0.5 248,625 - +0.4 249,073 + H281DRAFT_04138 0.38 -0.3 249,073 + H281DRAFT_04138 0.38 +0.1 249,073 + H281DRAFT_04138 0.38 +0.1 249,074 - H281DRAFT_04138 0.38 -0.2 249,161 - H281DRAFT_04138 0.44 -0.4 249,225 + H281DRAFT_04138 0.49 +0.6 249,437 + H281DRAFT_04138 0.64 +0.4 249,437 + H281DRAFT_04138 0.64 +0.4 249,437 + H281DRAFT_04138 0.64 +0.2 249,438 - H281DRAFT_04138 0.64 +0.1
Or see this region's nucleotide sequence