Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03378 and H281DRAFT_03379 are separated by 39 nucleotides H281DRAFT_03379 and H281DRAFT_03380 overlap by 8 nucleotides
H281DRAFT_03378: H281DRAFT_03378 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 443,820 to 444,767
_03378
H281DRAFT_03379: H281DRAFT_03379 - monosaccharide ABC transporter membrane protein, CUT2 family, at 444,807 to 445,838
_03379
H281DRAFT_03380: H281DRAFT_03380 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 445,831 to 447,378
_03380
Position (kb) 444
445
446 Strain fitness (log2 ratio) -1
0
1 at 444.388 kb on + strand, within H281DRAFT_03378 at 444.389 kb on - strand, within H281DRAFT_03378 at 444.389 kb on - strand, within H281DRAFT_03378 at 444.391 kb on + strand, within H281DRAFT_03378 at 444.652 kb on + strand, within H281DRAFT_03378 at 445.111 kb on + strand, within H281DRAFT_03379 at 445.111 kb on + strand, within H281DRAFT_03379 at 445.183 kb on + strand, within H281DRAFT_03379 at 445.237 kb on - strand, within H281DRAFT_03379 at 445.308 kb on - strand, within H281DRAFT_03379 at 445.737 kb on + strand at 445.767 kb on + strand at 445.827 kb on - strand at 445.856 kb on + strand at 446.030 kb on + strand, within H281DRAFT_03380 at 446.093 kb on + strand, within H281DRAFT_03380 at 446.192 kb on + strand, within H281DRAFT_03380 at 446.247 kb on + strand, within H281DRAFT_03380 at 446.247 kb on + strand, within H281DRAFT_03380 at 446.259 kb on + strand, within H281DRAFT_03380 at 446.640 kb on + strand, within H281DRAFT_03380 at 446.741 kb on + strand, within H281DRAFT_03380 at 446.741 kb on + strand, within H281DRAFT_03380 at 446.742 kb on - strand, within H281DRAFT_03380 at 446.742 kb on - strand, within H281DRAFT_03380 at 446.753 kb on - strand, within H281DRAFT_03380
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 444,388 + H281DRAFT_03378 0.60 -1.0 444,389 - H281DRAFT_03378 0.60 -0.4 444,389 - H281DRAFT_03378 0.60 +0.0 444,391 + H281DRAFT_03378 0.60 +0.1 444,652 + H281DRAFT_03378 0.88 -0.5 445,111 + H281DRAFT_03379 0.29 -0.7 445,111 + H281DRAFT_03379 0.29 -1.7 445,183 + H281DRAFT_03379 0.36 -0.5 445,237 - H281DRAFT_03379 0.42 +1.6 445,308 - H281DRAFT_03379 0.49 -0.6 445,737 + +0.4 445,767 + -0.3 445,827 - -0.1 445,856 + -0.7 446,030 + H281DRAFT_03380 0.13 -0.7 446,093 + H281DRAFT_03380 0.17 -0.9 446,192 + H281DRAFT_03380 0.23 +0.5 446,247 + H281DRAFT_03380 0.27 +0.9 446,247 + H281DRAFT_03380 0.27 +0.3 446,259 + H281DRAFT_03380 0.28 -1.3 446,640 + H281DRAFT_03380 0.52 -0.9 446,741 + H281DRAFT_03380 0.59 +0.0 446,741 + H281DRAFT_03380 0.59 +0.6 446,742 - H281DRAFT_03380 0.59 -0.7 446,742 - H281DRAFT_03380 0.59 +0.1 446,753 - H281DRAFT_03380 0.60 -0.6
Or see this region's nucleotide sequence