Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01836 and H281DRAFT_01837 are separated by 311 nucleotides H281DRAFT_01837 and H281DRAFT_01838 are separated by 285 nucleotides H281DRAFT_01838 and H281DRAFT_01839 are separated by 529 nucleotides
H281DRAFT_01836: H281DRAFT_01836 - hypothetical protein, at 743,720 to 744,448
_01836
H281DRAFT_01837: H281DRAFT_01837 - hypothetical protein, at 744,760 to 745,008
_01837
H281DRAFT_01838: H281DRAFT_01838 - regulator RcnB of Ni and Co efflux, at 745,294 to 745,704
_01838
H281DRAFT_01839: H281DRAFT_01839 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 746,234 to 748,552
_01839
Position (kb) 745
746 Strain fitness (log2 ratio) -2
-1
0
1 at 744.530 kb on + strand at 744.531 kb on - strand at 744.563 kb on + strand at 744.567 kb on + strand at 744.615 kb on - strand at 744.670 kb on + strand at 744.687 kb on + strand at 744.688 kb on - strand at 744.712 kb on + strand at 744.715 kb on + strand at 744.770 kb on + strand at 744.771 kb on - strand at 744.771 kb on - strand at 744.771 kb on - strand at 744.900 kb on + strand, within H281DRAFT_01837 at 745.073 kb on + strand at 745.074 kb on - strand at 745.152 kb on + strand at 745.152 kb on + strand at 745.152 kb on + strand at 745.215 kb on + strand at 745.215 kb on + strand at 745.289 kb on - strand at 745.289 kb on - strand at 745.289 kb on - strand at 745.292 kb on + strand at 745.292 kb on + strand at 745.293 kb on - strand at 745.293 kb on - strand at 745.299 kb on + strand at 745.299 kb on + strand at 745.310 kb on + strand at 745.311 kb on - strand at 745.311 kb on - strand at 745.338 kb on + strand, within H281DRAFT_01838 at 745.339 kb on - strand, within H281DRAFT_01838 at 745.434 kb on + strand, within H281DRAFT_01838 at 745.576 kb on + strand, within H281DRAFT_01838 at 745.577 kb on - strand, within H281DRAFT_01838 at 745.577 kb on - strand, within H281DRAFT_01838 at 745.702 kb on + strand at 745.748 kb on - strand at 745.920 kb on + strand at 745.921 kb on - strand at 745.946 kb on - strand at 745.946 kb on - strand at 745.947 kb on + strand at 745.948 kb on - strand at 745.948 kb on - strand at 746.040 kb on + strand at 746.041 kb on - strand at 746.041 kb on - strand at 746.044 kb on + strand at 746.095 kb on - strand at 746.095 kb on - strand at 746.119 kb on - strand at 746.225 kb on + strand at 746.226 kb on - strand at 746.226 kb on - strand at 746.240 kb on + strand at 746.241 kb on - strand at 746.241 kb on - strand at 746.243 kb on - strand at 746.243 kb on - strand at 746.366 kb on - strand at 746.634 kb on + strand, within H281DRAFT_01839 at 746.635 kb on - strand, within H281DRAFT_01839 at 746.635 kb on - strand, within H281DRAFT_01839
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 744,530 + -0.3 744,531 - -0.4 744,563 + -0.3 744,567 + -0.3 744,615 - -0.1 744,670 + +0.1 744,687 + +0.4 744,688 - +0.0 744,712 + +0.1 744,715 + -0.3 744,770 + -0.2 744,771 - +0.0 744,771 - +0.1 744,771 - -0.0 744,900 + H281DRAFT_01837 0.56 -0.7 745,073 + +0.1 745,074 - -0.4 745,152 + -0.1 745,152 + -0.2 745,152 + -1.1 745,215 + -1.2 745,215 + -0.4 745,289 - -0.2 745,289 - +0.5 745,289 - +0.1 745,292 + -0.1 745,292 + +0.4 745,293 - +0.2 745,293 - -0.1 745,299 + -0.2 745,299 + -0.8 745,310 + +0.3 745,311 - +0.0 745,311 - -0.5 745,338 + H281DRAFT_01838 0.11 -1.0 745,339 - H281DRAFT_01838 0.11 -0.9 745,434 + H281DRAFT_01838 0.34 -1.7 745,576 + H281DRAFT_01838 0.69 +0.2 745,577 - H281DRAFT_01838 0.69 -1.6 745,577 - H281DRAFT_01838 0.69 -0.4 745,702 + -0.4 745,748 - -1.0 745,920 + -0.5 745,921 - +0.1 745,946 - -0.0 745,946 - -0.1 745,947 + +0.3 745,948 - +0.4 745,948 - -0.6 746,040 + -0.3 746,041 - +0.5 746,041 - +0.1 746,044 + -0.5 746,095 - -0.8 746,095 - -2.0 746,119 - +0.8 746,225 + -0.2 746,226 - -0.9 746,226 - +0.3 746,240 + -0.2 746,241 - -0.6 746,241 - +0.1 746,243 - +0.2 746,243 - +0.4 746,366 - +0.0 746,634 + H281DRAFT_01839 0.17 -0.2 746,635 - H281DRAFT_01839 0.17 +0.3 746,635 - H281DRAFT_01839 0.17 +0.8
Or see this region's nucleotide sequence