Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03263 and H281DRAFT_03264 are separated by 325 nucleotides H281DRAFT_03264 and H281DRAFT_03265 are separated by 6 nucleotides
H281DRAFT_03263: H281DRAFT_03263 - Predicted arabinose efflux permease, MFS family, at 319,115 to 320,524
_03263
H281DRAFT_03264: H281DRAFT_03264 - methylmalonate-semialdehyde dehydrogenase [acylating], at 320,850 to 322,373
_03264
H281DRAFT_03265: H281DRAFT_03265 - Predicted arabinose efflux permease, MFS family, at 322,380 to 323,720
_03265
Position (kb) 320
321
322
323 Strain fitness (log2 ratio) -1
0
1
2 at 319.897 kb on + strand, within H281DRAFT_03263 at 319.897 kb on + strand, within H281DRAFT_03263 at 319.897 kb on + strand, within H281DRAFT_03263 at 319.899 kb on + strand, within H281DRAFT_03263 at 319.929 kb on - strand, within H281DRAFT_03263 at 320.328 kb on + strand, within H281DRAFT_03263 at 320.598 kb on + strand at 320.599 kb on - strand at 320.599 kb on - strand at 320.749 kb on + strand at 320.902 kb on - strand at 321.577 kb on - strand, within H281DRAFT_03264 at 321.577 kb on - strand, within H281DRAFT_03264 at 321.886 kb on - strand, within H281DRAFT_03264 at 321.887 kb on + strand at 322.014 kb on + strand, within H281DRAFT_03264 at 322.015 kb on - strand, within H281DRAFT_03264 at 322.266 kb on + strand at 322.292 kb on + strand at 322.432 kb on - strand at 322.454 kb on - strand at 322.510 kb on + strand at 323.006 kb on + strand, within H281DRAFT_03265
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 319,897 + H281DRAFT_03263 0.55 -0.7 319,897 + H281DRAFT_03263 0.55 +0.2 319,897 + H281DRAFT_03263 0.55 +0.3 319,899 + H281DRAFT_03263 0.56 -0.2 319,929 - H281DRAFT_03263 0.58 -0.5 320,328 + H281DRAFT_03263 0.86 -0.9 320,598 + +2.2 320,599 - +0.4 320,599 - -0.5 320,749 + +0.3 320,902 - -0.1 321,577 - H281DRAFT_03264 0.48 -0.0 321,577 - H281DRAFT_03264 0.48 +0.6 321,886 - H281DRAFT_03264 0.68 -0.1 321,887 + +0.7 322,014 + H281DRAFT_03264 0.76 -0.3 322,015 - H281DRAFT_03264 0.76 +1.2 322,266 + -0.8 322,292 + +0.0 322,432 - -0.0 322,454 - +0.1 322,510 + -0.0 323,006 + H281DRAFT_03265 0.47 -0.9
Or see this region's nucleotide sequence