Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00814 and H281DRAFT_00815 are separated by 60 nucleotides H281DRAFT_00815 and H281DRAFT_00816 are separated by 297 nucleotides H281DRAFT_00816 and H281DRAFT_00817 are separated by 131 nucleotides
H281DRAFT_00814: H281DRAFT_00814 - molybdopterin synthase subunit MoaE, at 903,357 to 903,833
_00814
H281DRAFT_00815: H281DRAFT_00815 - hemoglobin, at 903,894 to 904,436
_00815
H281DRAFT_00816: H281DRAFT_00816 - transcriptional regulator, BadM/Rrf2 family, at 904,734 to 905,243
_00816
H281DRAFT_00817: H281DRAFT_00817 - ATP-dependent Clp protease ATP-binding subunit ClpB, at 905,375 to 907,972
_00817
Position (kb) 904
905
906 Strain fitness (log2 ratio) -2
-1
0
1 at 904.036 kb on + strand, within H281DRAFT_00815 at 904.036 kb on + strand, within H281DRAFT_00815 at 904.037 kb on - strand, within H281DRAFT_00815 at 904.120 kb on + strand, within H281DRAFT_00815 at 904.151 kb on - strand, within H281DRAFT_00815 at 904.373 kb on + strand, within H281DRAFT_00815 at 904.374 kb on - strand, within H281DRAFT_00815 at 904.625 kb on + strand at 904.629 kb on + strand at 904.724 kb on + strand at 904.725 kb on - strand at 904.725 kb on - strand at 904.733 kb on + strand at 904.734 kb on - strand at 904.734 kb on - strand at 904.734 kb on - strand at 904.734 kb on - strand at 904.749 kb on + strand at 904.750 kb on - strand at 904.750 kb on - strand at 904.777 kb on + strand at 904.780 kb on - strand at 904.780 kb on - strand at 904.822 kb on + strand, within H281DRAFT_00816 at 904.822 kb on + strand, within H281DRAFT_00816 at 904.823 kb on - strand, within H281DRAFT_00816 at 904.833 kb on + strand, within H281DRAFT_00816 at 905.170 kb on + strand, within H281DRAFT_00816 at 905.171 kb on - strand, within H281DRAFT_00816 at 905.171 kb on - strand, within H281DRAFT_00816 at 905.456 kb on + strand at 905.456 kb on + strand at 905.456 kb on + strand at 905.456 kb on + strand at 905.457 kb on - strand at 905.457 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 904,036 + H281DRAFT_00815 0.26 +0.4 904,036 + H281DRAFT_00815 0.26 +0.9 904,037 - H281DRAFT_00815 0.26 +1.1 904,120 + H281DRAFT_00815 0.42 +0.0 904,151 - H281DRAFT_00815 0.47 -0.8 904,373 + H281DRAFT_00815 0.88 -0.1 904,374 - H281DRAFT_00815 0.88 +0.3 904,625 + -0.1 904,629 + -0.2 904,724 + +0.9 904,725 - -0.0 904,725 - -0.6 904,733 + -0.8 904,734 - -2.4 904,734 - -0.1 904,734 - -0.1 904,734 - +0.7 904,749 + -0.2 904,750 - -1.4 904,750 - +0.2 904,777 + +0.2 904,780 - -0.1 904,780 - -0.1 904,822 + H281DRAFT_00816 0.17 -0.6 904,822 + H281DRAFT_00816 0.17 -0.3 904,823 - H281DRAFT_00816 0.17 +0.1 904,833 + H281DRAFT_00816 0.19 -0.5 905,170 + H281DRAFT_00816 0.85 -0.2 905,171 - H281DRAFT_00816 0.86 -1.4 905,171 - H281DRAFT_00816 0.86 -0.4 905,456 + -0.9 905,456 + -0.8 905,456 + -0.2 905,456 + -0.1 905,457 - -0.2 905,457 - +0.5
Or see this region's nucleotide sequence