Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06372 and H281DRAFT_06373 are separated by 252 nucleotides H281DRAFT_06373 and H281DRAFT_06374 are separated by 129 nucleotides H281DRAFT_06374 and H281DRAFT_06375 are separated by 44 nucleotides H281DRAFT_06375 and H281DRAFT_06376 are separated by 231 nucleotides
H281DRAFT_06372: H281DRAFT_06372 - TadE-like protein, at 44,366 to 45,418
_06372
H281DRAFT_06373: H281DRAFT_06373 - Protein of unknown function (DUF3005), at 45,671 to 46,252
_06373
H281DRAFT_06374: H281DRAFT_06374 - ATP-binding cassette, subfamily B, at 46,382 to 48,211
_06374
H281DRAFT_06375: H281DRAFT_06375 - hypothetical protein, at 48,256 to 48,483
_06375
H281DRAFT_06376: H281DRAFT_06376 - transcriptional regulator, LysR family, at 48,715 to 49,611
_06376
Position (kb) 46
47
48
49 Strain fitness (log2 ratio) -1
0
1 at 45.417 kb on - strand at 45.510 kb on - strand at 45.740 kb on - strand, within H281DRAFT_06373 at 45.805 kb on + strand, within H281DRAFT_06373 at 46.092 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.251 kb on - strand at 46.493 kb on + strand at 46.494 kb on - strand at 46.847 kb on + strand, within H281DRAFT_06374 at 46.848 kb on - strand, within H281DRAFT_06374 at 47.050 kb on - strand, within H281DRAFT_06374 at 47.643 kb on + strand, within H281DRAFT_06374 at 47.643 kb on + strand at 47.943 kb on + strand, within H281DRAFT_06374 at 47.943 kb on + strand, within H281DRAFT_06374 at 48.156 kb on - strand at 48.377 kb on + strand, within H281DRAFT_06375 at 48.378 kb on - strand, within H281DRAFT_06375 at 48.378 kb on - strand, within H281DRAFT_06375 at 49.129 kb on + strand, within H281DRAFT_06376 at 49.130 kb on - strand, within H281DRAFT_06376
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 45,417 - +0.3 45,510 - +0.6 45,740 - H281DRAFT_06373 0.12 -0.1 45,805 + H281DRAFT_06373 0.23 +0.6 46,092 + H281DRAFT_06373 0.72 +0.2 46,169 + H281DRAFT_06373 0.86 -0.1 46,169 + H281DRAFT_06373 0.86 +0.1 46,169 + H281DRAFT_06373 0.86 -0.2 46,169 + H281DRAFT_06373 0.86 +0.6 46,251 - -0.8 46,493 + +0.6 46,494 - -0.5 46,847 + H281DRAFT_06374 0.25 +0.6 46,848 - H281DRAFT_06374 0.25 +1.2 47,050 - H281DRAFT_06374 0.37 -0.2 47,643 + H281DRAFT_06374 0.69 -0.2 47,643 + +0.1 47,943 + H281DRAFT_06374 0.85 +0.6 47,943 + H281DRAFT_06374 0.85 -1.4 48,156 - -0.7 48,377 + H281DRAFT_06375 0.53 +0.5 48,378 - H281DRAFT_06375 0.54 +0.4 48,378 - H281DRAFT_06375 0.54 +0.4 49,129 + H281DRAFT_06376 0.46 -0.1 49,130 - H281DRAFT_06376 0.46 +0.5
Or see this region's nucleotide sequence