Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05860

Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
138,833	+		H281DRAFT_05859	0.52	+0.1
138,833	+		H281DRAFT_05859	0.52	-0.1
138,833	+		H281DRAFT_05859	0.52	+0.2
138,833	+		H281DRAFT_05859	0.52	-0.7
138,834	-		H281DRAFT_05859	0.52	-0.4
138,834	-		H281DRAFT_05859	0.52	+0.2
138,835	+		H281DRAFT_05859	0.52	+0.1
138,835	+		H281DRAFT_05859	0.52	+0.6
138,836	-		H281DRAFT_05859	0.52	+0.4
138,837	+		H281DRAFT_05859	0.52	-0.7
138,837	+		H281DRAFT_05859	0.52	+0.2
138,837	+		H281DRAFT_05859	0.52	+0.3
138,838	-		H281DRAFT_05859	0.52	+0.1
138,838	-		H281DRAFT_05859	0.52	+0.3
138,838	-		H281DRAFT_05859	0.52	-0.9
138,838	-				+1.7
138,838	-		H281DRAFT_05859	0.52	-1.1
138,838	-		H281DRAFT_05859	0.52	+0.3
138,838	-		H281DRAFT_05859	0.52	+0.1
138,948	-		H281DRAFT_05859	0.59	+0.3
138,987	-		H281DRAFT_05859	0.62	-0.1
138,987	-		H281DRAFT_05859	0.62	-0.1
138,987	-		H281DRAFT_05859	0.62	+0.1
139,071	-		H281DRAFT_05859	0.67	-0.3
139,071	-		H281DRAFT_05859	0.67	-0.1
139,117	+		H281DRAFT_05859	0.69	+1.0
139,117	+		H281DRAFT_05859	0.69	+1.3
139,118	-		H281DRAFT_05859	0.70	+0.3
139,118	-		H281DRAFT_05859	0.70	+0.6
139,118	-		H281DRAFT_05859	0.70	+0.2
139,130	+		H281DRAFT_05859	0.70	+0.1
139,208	+		H281DRAFT_05859	0.75	-0.9
139,208	+		H281DRAFT_05859	0.75	-1.1
139,209	-		H281DRAFT_05859	0.75	+0.1
139,209	-		H281DRAFT_05859	0.75	+0.5
139,209	-		H281DRAFT_05859	0.75	+0.1
139,209	-		H281DRAFT_05859	0.75	+0.4
139,286	+		H281DRAFT_05859	0.80	-0.4
139,286	+		H281DRAFT_05859	0.80	+0.1
139,286	+		H281DRAFT_05859	0.80	+0.6
139,286	+		H281DRAFT_05859	0.80	-0.0
139,287	-		H281DRAFT_05859	0.80	-0.2
139,287	-		H281DRAFT_05859	0.80	+0.1
139,288	+		H281DRAFT_05859	0.80	+0.0
139,288	+		H281DRAFT_05859	0.80	+0.8
139,288	+		H281DRAFT_05859	0.80	-0.3
139,288	+		H281DRAFT_05859	0.80	-0.0
139,299	+		H281DRAFT_05859	0.81	-0.6
139,299	+		H281DRAFT_05859	0.81	+0.1
139,299	+		H281DRAFT_05859	0.81	-1.2
139,300	-		H281DRAFT_05859	0.81	-0.3
139,300	-		H281DRAFT_05859	0.81	-0.5
139,300	-		H281DRAFT_05859	0.81	-0.5
139,300	-		H281DRAFT_05859	0.81	-0.5
139,334	+		H281DRAFT_05859	0.83	+0.3
139,334	+		H281DRAFT_05859	0.83	+0.3
139,334	+		H281DRAFT_05859	0.83	+0.1
139,335	-		H281DRAFT_05859	0.83	+0.0
139,335	-		H281DRAFT_05859	0.83	+0.2
139,335	-		H281DRAFT_05859	0.83	-0.1
139,335	-		H281DRAFT_05859	0.83	-0.9
139,335	-		H281DRAFT_05859	0.83	-0.5
139,469	+				-0.3
139,469	+				+0.2
139,470	-				+0.4
139,470	-				+1.2
139,535	+				+0.3
139,535	+				-0.6
139,610	+				-0.0
139,610	+				+0.1
139,611	-				+1.1
139,611	-				+0.1
140,001	-		H281DRAFT_05860	0.20	-0.0
140,005	+		H281DRAFT_05860	0.20	-0.0
140,118	+		H281DRAFT_05860	0.29	-0.3
140,180	+		H281DRAFT_05860	0.34	+0.1
140,181	-		H281DRAFT_05860	0.34	+0.3
140,252	+		H281DRAFT_05860	0.40	-0.0
140,252	+		H281DRAFT_05860	0.40	+1.1
140,252	+		H281DRAFT_05860	0.40	-0.0
140,252	+		H281DRAFT_05860	0.40	-0.0
140,252	+		H281DRAFT_05860	0.40	+0.1
140,252	+		H281DRAFT_05860	0.40	+0.1
140,253	-		H281DRAFT_05860	0.40	-0.4
140,253	-		H281DRAFT_05860	0.40	-0.2
140,321	+		H281DRAFT_05860	0.45	-0.2
140,321	+		H281DRAFT_05860	0.45	-0.4
140,321	+		H281DRAFT_05860	0.45	+0.3
140,321	+		H281DRAFT_05860	0.45	+0.4
140,321	+		H281DRAFT_05860	0.45	-0.3
140,321	+		H281DRAFT_05860	0.45	-0.6
140,321	+		H281DRAFT_05860	0.45	+0.2
140,321	+		H281DRAFT_05860	0.45	-0.5
140,322	-		H281DRAFT_05860	0.45	+0.4
140,322	-		H281DRAFT_05860	0.45	-0.3
140,322	-		H281DRAFT_05860	0.45	+0.6
140,322	-		H281DRAFT_05860	0.45	+0.2
140,325	+		H281DRAFT_05860	0.45	+0.3
140,325	+		H281DRAFT_05860	0.45	-0.4
140,325	+		H281DRAFT_05860	0.45	+0.1
140,325	+		H281DRAFT_05860	0.45	+0.1
140,325	+		H281DRAFT_05860	0.45	+0.4
140,325	+		H281DRAFT_05860	0.45	+0.1
140,325	+		H281DRAFT_05860	0.45	+0.6
140,325	+		H281DRAFT_05860	0.45	+0.3
140,326	-		H281DRAFT_05860	0.45	-0.1
140,326	-		H281DRAFT_05860	0.45	-1.1
140,326	-		H281DRAFT_05860	0.45	-1.1
140,326	-		H281DRAFT_05860	0.45	-0.0
140,326	-		H281DRAFT_05860	0.45	-0.1
140,326	-		H281DRAFT_05860	0.45	-0.1
140,326	-		H281DRAFT_05860	0.45	-0.8
140,494	+		H281DRAFT_05860	0.59	-0.4
140,494	+		H281DRAFT_05860	0.59	-0.4
140,494	+		H281DRAFT_05860	0.59	+2.0
140,540	+		H281DRAFT_05860	0.62	+0.0
140,540	+		H281DRAFT_05860	0.62	+0.5
140,541	-		H281DRAFT_05860	0.62	-0.3
140,541	-		H281DRAFT_05860	0.62	+0.2
140,541	-		H281DRAFT_05860	0.62	+0.5
140,541	-		H281DRAFT_05860	0.62	+0.6
140,541	-		H281DRAFT_05860	0.62	+0.4
140,717	+		H281DRAFT_05860	0.76	+0.1
140,754	+		H281DRAFT_05860	0.79	-0.6
140,754	+		H281DRAFT_05860	0.79	+0.1
140,755	-		H281DRAFT_05860	0.79	+0.4
140,755	-		H281DRAFT_05860	0.79	+0.0
140,755	-		H281DRAFT_05860	0.79	+0.5
140,997	+				-0.0
141,000	+				+0.8
141,018	-				+1.4
141,068	+				+0.3
141,068	+				-0.9
141,068	+				+0.1
141,068	+				-0.6
141,068	+				+0.1
141,069	-				+0.0
141,069	-				+1.2
141,069	-				+0.1
141,244	+				-0.4
141,244	+				-2.6
141,244	+				-0.1
141,244	+				-0.1
141,244	+				+0.1
141,278	+				+0.1
141,285	+				-0.5
141,295	+				+0.3
141,295	+				-0.0
141,520	+		H281DRAFT_05861	0.53	-0.3
141,520	+		H281DRAFT_05861	0.53	-1.1
141,520	+		H281DRAFT_05861	0.53	-0.2
141,520	+		H281DRAFT_05861	0.53	-0.4
141,520	+		H281DRAFT_05861	0.53	+0.2
141,520	+		H281DRAFT_05861	0.53	+0.5
141,520	+		H281DRAFT_05861	0.53	-0.1
141,520	+		H281DRAFT_05861	0.53	-0.7
141,520	+		H281DRAFT_05861	0.53	-0.1