Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05096 and H281DRAFT_05097 are separated by 555 nucleotides H281DRAFT_05097 and H281DRAFT_05098 are separated by 405 nucleotides
H281DRAFT_05096: H281DRAFT_05096 - hypothetical protein, at 38,499 to 38,753
_05096
H281DRAFT_05097: H281DRAFT_05097 - putative transposase, at 39,309 to 39,710
_05097
H281DRAFT_05098: H281DRAFT_05098 - DNA-binding transcriptional regulator, LysR family, at 40,116 to 41,018
_05098
Position (kb) 39
40 Strain fitness (log2 ratio) -1
0
1
2 at 38.348 kb on + strand at 38.365 kb on + strand at 38.365 kb on + strand at 38.366 kb on - strand at 38.384 kb on + strand at 38.385 kb on - strand at 38.393 kb on + strand at 38.781 kb on + strand at 38.781 kb on + strand at 38.781 kb on + strand at 38.782 kb on - strand at 38.782 kb on - strand at 38.805 kb on - strand at 38.805 kb on - strand at 38.805 kb on - strand at 38.809 kb on + strand at 38.809 kb on + strand at 38.810 kb on - strand at 38.810 kb on - strand at 38.810 kb on - strand at 38.810 kb on - strand at 38.810 kb on - strand at 38.810 kb on - strand at 38.810 kb on - strand at 38.834 kb on + strand at 38.834 kb on + strand at 38.834 kb on + strand at 38.835 kb on - strand at 38.838 kb on + strand at 38.844 kb on + strand at 38.845 kb on - strand at 38.952 kb on + strand at 39.099 kb on + strand at 39.100 kb on - strand at 39.100 kb on - strand at 39.265 kb on + strand at 39.265 kb on + strand at 39.310 kb on + strand at 39.462 kb on - strand, within H281DRAFT_05097 at 39.462 kb on - strand, within H281DRAFT_05097 at 39.465 kb on + strand, within H281DRAFT_05097 at 39.466 kb on - strand, within H281DRAFT_05097 at 39.466 kb on - strand, within H281DRAFT_05097 at 39.466 kb on - strand, within H281DRAFT_05097 at 39.480 kb on - strand, within H281DRAFT_05097 at 39.480 kb on - strand, within H281DRAFT_05097 at 39.730 kb on - strand at 39.814 kb on + strand at 39.815 kb on - strand at 39.853 kb on + strand at 39.853 kb on + strand at 39.854 kb on - strand at 39.924 kb on + strand at 39.925 kb on - strand at 39.928 kb on + strand at 39.937 kb on - strand at 40.021 kb on + strand at 40.139 kb on - strand at 40.139 kb on - strand at 40.176 kb on - strand at 40.707 kb on + strand, within H281DRAFT_05098
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 38,348 + -0.5 38,365 + +0.5 38,365 + -0.3 38,366 - -0.3 38,384 + +0.5 38,385 - -0.0 38,393 + -0.3 38,781 + +0.0 38,781 + -0.5 38,781 + -0.1 38,782 - +0.9 38,782 - -0.1 38,805 - +0.2 38,805 - +1.7 38,805 - -0.5 38,809 + -0.1 38,809 + +0.5 38,810 - -0.8 38,810 - +0.0 38,810 - -0.3 38,810 - +0.3 38,810 - +2.0 38,810 - +0.6 38,810 - -0.3 38,834 + +0.5 38,834 + -0.1 38,834 + -0.2 38,835 - -0.6 38,838 + +1.5 38,844 + -0.7 38,845 - -0.7 38,952 + +0.5 39,099 + -0.1 39,100 - +0.3 39,100 - +0.4 39,265 + +0.5 39,265 + +0.8 39,310 + +0.7 39,462 - H281DRAFT_05097 0.38 +2.5 39,462 - H281DRAFT_05097 0.38 +0.5 39,465 + H281DRAFT_05097 0.39 -0.1 39,466 - H281DRAFT_05097 0.39 +0.3 39,466 - H281DRAFT_05097 0.39 +0.5 39,466 - H281DRAFT_05097 0.39 +0.3 39,480 - H281DRAFT_05097 0.43 +0.5 39,480 - H281DRAFT_05097 0.43 +1.3 39,730 - -0.6 39,814 + +0.6 39,815 - -0.3 39,853 + +0.4 39,853 + -0.1 39,854 - -0.8 39,924 + -0.1 39,925 - -1.1 39,928 + -0.5 39,937 - +0.9 40,021 + +0.0 40,139 - +0.0 40,139 - -0.5 40,176 - -0.2 40,707 + H281DRAFT_05098 0.65 -0.2
Or see this region's nucleotide sequence