Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03415 and H281DRAFT_03416 are separated by 328 nucleotides H281DRAFT_03416 and H281DRAFT_03417 are separated by 464 nucleotides
H281DRAFT_03415: H281DRAFT_03415 - polyphosphate kinase 2, PA0141 family, at 485,888 to 486,703
_03415
H281DRAFT_03416: H281DRAFT_03416 - filamentous hemagglutinin family N-terminal domain-containing protein, at 487,032 to 489,509
_03416
H281DRAFT_03417: H281DRAFT_03417 - hypothetical protein, at 489,974 to 491,662
_03417
Position (kb) 487
488
489
490 Strain fitness (log2 ratio) -1
0
1 at 486.299 kb on + strand, within H281DRAFT_03415 at 486.430 kb on - strand, within H281DRAFT_03415 at 486.482 kb on + strand, within H281DRAFT_03415 at 487.023 kb on - strand at 487.411 kb on + strand, within H281DRAFT_03416 at 487.444 kb on + strand, within H281DRAFT_03416 at 487.532 kb on - strand, within H281DRAFT_03416 at 487.631 kb on - strand at 487.667 kb on - strand, within H281DRAFT_03416 at 487.726 kb on + strand, within H281DRAFT_03416 at 487.773 kb on - strand, within H281DRAFT_03416 at 488.038 kb on + strand, within H281DRAFT_03416 at 488.157 kb on - strand, within H281DRAFT_03416 at 489.370 kb on - strand at 489.536 kb on - strand at 489.590 kb on - strand at 489.637 kb on + strand at 489.871 kb on - strand at 489.874 kb on + strand at 489.875 kb on - strand at 490.025 kb on + strand at 490.026 kb on - strand at 490.027 kb on + strand at 490.028 kb on - strand at 490.350 kb on + strand, within H281DRAFT_03417 at 490.351 kb on - strand, within H281DRAFT_03417 at 490.363 kb on + strand, within H281DRAFT_03417 at 490.367 kb on + strand, within H281DRAFT_03417 at 490.368 kb on - strand, within H281DRAFT_03417 at 490.368 kb on - strand, within H281DRAFT_03417 at 490.434 kb on - strand, within H281DRAFT_03417
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 486,299 + H281DRAFT_03415 0.50 +0.4 486,430 - H281DRAFT_03415 0.66 -0.2 486,482 + H281DRAFT_03415 0.73 +0.0 487,023 - -0.6 487,411 + H281DRAFT_03416 0.15 -1.4 487,444 + H281DRAFT_03416 0.17 -0.4 487,532 - H281DRAFT_03416 0.20 -0.7 487,631 - -1.0 487,667 - H281DRAFT_03416 0.26 +0.4 487,726 + H281DRAFT_03416 0.28 -1.4 487,773 - H281DRAFT_03416 0.30 -0.5 488,038 + H281DRAFT_03416 0.41 -0.4 488,157 - H281DRAFT_03416 0.45 +0.1 489,370 - -0.4 489,536 - +0.1 489,590 - -0.5 489,637 + -0.2 489,871 - +0.0 489,874 + -0.4 489,875 - -0.1 490,025 + +0.7 490,026 - +1.6 490,027 + +0.7 490,028 - -0.1 490,350 + H281DRAFT_03417 0.22 +0.1 490,351 - H281DRAFT_03417 0.22 -0.5 490,363 + H281DRAFT_03417 0.23 +0.1 490,367 + H281DRAFT_03417 0.23 -0.0 490,368 - H281DRAFT_03417 0.23 -0.6 490,368 - H281DRAFT_03417 0.23 -0.4 490,434 - H281DRAFT_03417 0.27 -0.5
Or see this region's nucleotide sequence