Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01763 and H281DRAFT_01764 are separated by 10 nucleotides H281DRAFT_01764 and H281DRAFT_01765 overlap by 23 nucleotides H281DRAFT_01765 and H281DRAFT_01766 are separated by 26 nucleotides
H281DRAFT_01763: H281DRAFT_01763 - hypothetical protein, at 658,646 to 659,146
_01763
H281DRAFT_01764: H281DRAFT_01764 - cytochrome c oxidase subunit 3, at 659,157 to 659,771
_01764
H281DRAFT_01765: H281DRAFT_01765 - cytochrome c oxidase subunit I+III, at 659,749 to 661,740
_01765
H281DRAFT_01766: H281DRAFT_01766 - cytochrome c oxidase subunit 2, at 661,767 to 662,825
_01766
Position (kb) 659
660
661
662 Strain fitness (log2 ratio) -1
0
1
2
3 at 659.312 kb on + strand, within H281DRAFT_01764 at 659.798 kb on - strand at 659.798 kb on - strand at 659.851 kb on + strand at 659.956 kb on - strand, within H281DRAFT_01765 at 660.306 kb on + strand, within H281DRAFT_01765 at 660.307 kb on - strand, within H281DRAFT_01765 at 660.308 kb on + strand, within H281DRAFT_01765 at 660.450 kb on - strand, within H281DRAFT_01765 at 660.494 kb on + strand, within H281DRAFT_01765 at 660.518 kb on + strand, within H281DRAFT_01765 at 660.630 kb on - strand, within H281DRAFT_01765 at 660.821 kb on + strand, within H281DRAFT_01765 at 660.897 kb on - strand, within H281DRAFT_01765 at 660.898 kb on + strand, within H281DRAFT_01765 at 661.123 kb on + strand, within H281DRAFT_01765 at 661.218 kb on - strand, within H281DRAFT_01765 at 661.242 kb on - strand, within H281DRAFT_01765 at 661.242 kb on - strand, within H281DRAFT_01765 at 661.242 kb on - strand, within H281DRAFT_01765 at 661.385 kb on + strand, within H281DRAFT_01765 at 661.787 kb on - strand at 662.130 kb on - strand at 662.197 kb on - strand, within H281DRAFT_01766 at 662.467 kb on + strand, within H281DRAFT_01766
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 659,312 + H281DRAFT_01764 0.25 -1.3 659,798 - +0.5 659,798 - +1.5 659,851 + -0.5 659,956 - H281DRAFT_01765 0.10 +0.7 660,306 + H281DRAFT_01765 0.28 +3.0 660,307 - H281DRAFT_01765 0.28 +0.2 660,308 + H281DRAFT_01765 0.28 +0.4 660,450 - H281DRAFT_01765 0.35 -0.0 660,494 + H281DRAFT_01765 0.37 -0.1 660,518 + H281DRAFT_01765 0.39 -0.1 660,630 - H281DRAFT_01765 0.44 +0.8 660,821 + H281DRAFT_01765 0.54 +0.0 660,897 - H281DRAFT_01765 0.58 +0.3 660,898 + H281DRAFT_01765 0.58 +0.3 661,123 + H281DRAFT_01765 0.69 -0.2 661,218 - H281DRAFT_01765 0.74 -0.4 661,242 - H281DRAFT_01765 0.75 +0.5 661,242 - H281DRAFT_01765 0.75 -0.6 661,242 - H281DRAFT_01765 0.75 +0.3 661,385 + H281DRAFT_01765 0.82 -0.5 661,787 - +0.8 662,130 - -0.2 662,197 - H281DRAFT_01766 0.41 -0.3 662,467 + H281DRAFT_01766 0.66 -0.2
Or see this region's nucleotide sequence