Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05787 and H281DRAFT_05788 are separated by 239 nucleotides H281DRAFT_05788 and H281DRAFT_05789 overlap by 4 nucleotides H281DRAFT_05789 and H281DRAFT_05790 are separated by 67 nucleotides
H281DRAFT_05787: H281DRAFT_05787 - flagellar hook-basal body complex protein FliE, at 61,228 to 61,578
_05787
H281DRAFT_05788: H281DRAFT_05788 - flagellar protein FliS, at 61,818 to 62,252
_05788
H281DRAFT_05789: H281DRAFT_05789 - flagellar protein FliT, at 62,249 to 62,575
_05789
H281DRAFT_05790: H281DRAFT_05790 - hook-length control protein FliK, at 62,643 to 64,112
_05790
Position (kb) 62
63 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 61.550 kb on - strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.738 kb on - strand at 61.738 kb on - strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.794 kb on - strand at 61.851 kb on + strand at 61.852 kb on - strand at 61.917 kb on + strand, within H281DRAFT_05788 at 61.917 kb on + strand, within H281DRAFT_05788 at 62.086 kb on + strand, within H281DRAFT_05788 at 62.086 kb on + strand, within H281DRAFT_05788 at 62.086 kb on + strand, within H281DRAFT_05788 at 62.087 kb on - strand, within H281DRAFT_05788 at 62.087 kb on - strand, within H281DRAFT_05788 at 62.088 kb on + strand, within H281DRAFT_05788 at 62.088 kb on + strand, within H281DRAFT_05788 at 62.088 kb on + strand, within H281DRAFT_05788 at 62.089 kb on - strand, within H281DRAFT_05788 at 62.090 kb on + strand at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.095 kb on - strand, within H281DRAFT_05788 at 62.095 kb on - strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.126 kb on - strand, within H281DRAFT_05788 at 62.209 kb on + strand at 62.209 kb on + strand at 62.267 kb on + strand at 62.268 kb on - strand at 62.280 kb on - strand at 62.367 kb on - strand, within H281DRAFT_05789 at 62.561 kb on + strand at 62.561 kb on + strand at 62.896 kb on + strand, within H281DRAFT_05790 at 62.897 kb on - strand, within H281DRAFT_05790 at 62.985 kb on - strand, within H281DRAFT_05790 at 63.090 kb on + strand, within H281DRAFT_05790 at 63.091 kb on - strand, within H281DRAFT_05790 at 63.410 kb on - strand, within H281DRAFT_05790
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 61,550 - +0.5 61,737 + +0.7 61,737 + +0.7 61,737 + -0.9 61,737 + +1.8 61,737 + +0.2 61,737 + +0.0 61,738 - -2.6 61,738 - -4.2 61,793 + -3.4 61,793 + -1.0 61,793 + -1.2 61,793 + -0.8 61,793 + -0.7 61,793 + -1.5 61,794 - -1.6 61,851 + -2.7 61,852 - -3.6 61,917 + H281DRAFT_05788 0.23 -2.9 61,917 + H281DRAFT_05788 0.23 -1.3 62,086 + H281DRAFT_05788 0.62 -2.2 62,086 + H281DRAFT_05788 0.62 -2.4 62,086 + H281DRAFT_05788 0.62 +0.3 62,087 - H281DRAFT_05788 0.62 -1.8 62,087 - H281DRAFT_05788 0.62 -0.1 62,088 + H281DRAFT_05788 0.62 -1.7 62,088 + H281DRAFT_05788 0.62 -2.9 62,088 + H281DRAFT_05788 0.62 -4.8 62,089 - H281DRAFT_05788 0.62 -1.8 62,090 + -1.1 62,090 + H281DRAFT_05788 0.63 +0.1 62,090 + H281DRAFT_05788 0.63 -0.7 62,090 + H281DRAFT_05788 0.63 -3.3 62,090 + H281DRAFT_05788 0.63 -2.9 62,090 + H281DRAFT_05788 0.63 -2.4 62,090 + H281DRAFT_05788 0.63 -1.9 62,090 + H281DRAFT_05788 0.63 -4.0 62,090 + H281DRAFT_05788 0.63 -3.1 62,090 + H281DRAFT_05788 0.63 -0.5 62,090 + H281DRAFT_05788 0.63 -1.1 62,091 - H281DRAFT_05788 0.63 -3.4 62,091 - H281DRAFT_05788 0.63 -1.1 62,091 - H281DRAFT_05788 0.63 -3.1 62,091 - H281DRAFT_05788 0.63 -3.5 62,091 - H281DRAFT_05788 0.63 -1.9 62,091 - H281DRAFT_05788 0.63 -0.1 62,091 - H281DRAFT_05788 0.63 -1.6 62,091 - H281DRAFT_05788 0.63 -2.9 62,091 - H281DRAFT_05788 0.63 -3.5 62,091 - H281DRAFT_05788 0.63 -2.5 62,094 + H281DRAFT_05788 0.63 -4.8 62,094 + H281DRAFT_05788 0.63 -2.9 62,094 + H281DRAFT_05788 0.63 -3.0 62,094 + H281DRAFT_05788 0.63 -3.1 62,094 + H281DRAFT_05788 0.63 -5.0 62,094 + H281DRAFT_05788 0.63 -3.0 62,095 - H281DRAFT_05788 0.64 -1.1 62,095 - H281DRAFT_05788 0.64 +0.5 62,096 + H281DRAFT_05788 0.64 -4.7 62,096 + H281DRAFT_05788 0.64 -2.4 62,096 + H281DRAFT_05788 0.64 -1.0 62,096 + H281DRAFT_05788 0.64 -3.6 62,096 + H281DRAFT_05788 0.64 -1.6 62,097 - H281DRAFT_05788 0.64 -2.2 62,097 - H281DRAFT_05788 0.64 -1.6 62,097 - H281DRAFT_05788 0.64 -1.4 62,097 - H281DRAFT_05788 0.64 -2.2 62,125 + H281DRAFT_05788 0.71 -0.8 62,125 + H281DRAFT_05788 0.71 -4.1 62,125 + H281DRAFT_05788 0.71 -3.7 62,125 + H281DRAFT_05788 0.71 -3.7 62,126 - H281DRAFT_05788 0.71 -1.5 62,209 + -1.1 62,209 + +0.0 62,267 + -0.8 62,268 - -3.6 62,280 - -3.0 62,367 - H281DRAFT_05789 0.36 -2.7 62,561 + +2.8 62,561 + +1.8 62,896 + H281DRAFT_05790 0.17 +1.4 62,897 - H281DRAFT_05790 0.17 -0.6 62,985 - H281DRAFT_05790 0.23 -0.1 63,090 + H281DRAFT_05790 0.30 -0.6 63,091 - H281DRAFT_05790 0.30 -0.7 63,410 - H281DRAFT_05790 0.52 +0.6
Or see this region's nucleotide sequence