Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05557 and H281DRAFT_05558 are separated by 300 nucleotides H281DRAFT_05558 and H281DRAFT_05559 are separated by 54 nucleotides
H281DRAFT_05557: H281DRAFT_05557 - MFS transporter, AAHS family, benzoate transport protein, at 146,860 to 148,236
_05557
H281DRAFT_05558: H281DRAFT_05558 - fatty-acyl-CoA synthase, at 148,537 to 150,189
_05558
H281DRAFT_05559: H281DRAFT_05559 - acetyl-CoA C-acetyltransferase, at 150,244 to 151,428
_05559
Position (kb) 148
149
150
151 Strain fitness (log2 ratio) -1
0
1 at 147.595 kb on + strand, within H281DRAFT_05557 at 147.858 kb on + strand, within H281DRAFT_05557 at 147.858 kb on + strand, within H281DRAFT_05557 at 147.859 kb on - strand at 148.156 kb on + strand at 148.225 kb on + strand at 148.465 kb on + strand at 148.558 kb on + strand at 149.093 kb on + strand, within H281DRAFT_05558 at 149.094 kb on - strand, within H281DRAFT_05558 at 149.186 kb on + strand, within H281DRAFT_05558 at 149.275 kb on + strand, within H281DRAFT_05558 at 149.275 kb on + strand, within H281DRAFT_05558 at 149.364 kb on - strand, within H281DRAFT_05558 at 149.507 kb on + strand, within H281DRAFT_05558 at 149.561 kb on + strand, within H281DRAFT_05558 at 149.618 kb on + strand, within H281DRAFT_05558 at 149.619 kb on - strand, within H281DRAFT_05558 at 149.699 kb on + strand, within H281DRAFT_05558 at 149.700 kb on - strand, within H281DRAFT_05558 at 149.700 kb on - strand, within H281DRAFT_05558 at 149.824 kb on + strand, within H281DRAFT_05558 at 149.855 kb on + strand, within H281DRAFT_05558 at 149.856 kb on - strand, within H281DRAFT_05558 at 149.883 kb on + strand, within H281DRAFT_05558 at 149.884 kb on - strand at 150.091 kb on + strand at 150.288 kb on + strand at 150.329 kb on - strand at 150.329 kb on - strand at 150.486 kb on + strand, within H281DRAFT_05559 at 150.814 kb on + strand, within H281DRAFT_05559 at 150.957 kb on + strand, within H281DRAFT_05559 at 150.957 kb on + strand, within H281DRAFT_05559 at 150.958 kb on - strand, within H281DRAFT_05559
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 147,595 + H281DRAFT_05557 0.53 +0.5 147,858 + H281DRAFT_05557 0.72 -0.4 147,858 + H281DRAFT_05557 0.72 +0.0 147,859 - +0.9 148,156 + -0.7 148,225 + -0.2 148,465 + -1.2 148,558 + -0.5 149,093 + H281DRAFT_05558 0.34 +0.1 149,094 - H281DRAFT_05558 0.34 -0.2 149,186 + H281DRAFT_05558 0.39 +1.4 149,275 + H281DRAFT_05558 0.45 -0.9 149,275 + H281DRAFT_05558 0.45 +0.2 149,364 - H281DRAFT_05558 0.50 +1.6 149,507 + H281DRAFT_05558 0.59 +0.5 149,561 + H281DRAFT_05558 0.62 -0.7 149,618 + H281DRAFT_05558 0.65 +1.0 149,619 - H281DRAFT_05558 0.65 +0.5 149,699 + H281DRAFT_05558 0.70 -0.0 149,700 - H281DRAFT_05558 0.70 +0.6 149,700 - H281DRAFT_05558 0.70 -0.9 149,824 + H281DRAFT_05558 0.78 -0.2 149,855 + H281DRAFT_05558 0.80 +0.9 149,856 - H281DRAFT_05558 0.80 -0.1 149,883 + H281DRAFT_05558 0.81 -0.3 149,884 - -0.1 150,091 + +1.0 150,288 + +0.1 150,329 - +0.4 150,329 - -0.2 150,486 + H281DRAFT_05559 0.20 +0.1 150,814 + H281DRAFT_05559 0.48 -1.0 150,957 + H281DRAFT_05559 0.60 +1.2 150,957 + H281DRAFT_05559 0.60 +0.5 150,958 - H281DRAFT_05559 0.60 -0.8
Or see this region's nucleotide sequence