Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05390 and H281DRAFT_05391 are separated by 67 nucleotides H281DRAFT_05391 and H281DRAFT_05392 are separated by 178 nucleotides
H281DRAFT_05390: H281DRAFT_05390 - Predicted PurR-regulated permease PerM, at 152,371 to 153,471
_05390
H281DRAFT_05391: H281DRAFT_05391 - S-formylglutathione hydrolase FrmB, at 153,539 to 154,411
_05391
H281DRAFT_05392: H281DRAFT_05392 - hypothetical protein, at 154,590 to 155,699
_05392
Position (kb) 153
154
155 Strain fitness (log2 ratio) -1
0
1
2 at 152.815 kb on + strand, within H281DRAFT_05390 at 152.815 kb on + strand, within H281DRAFT_05390 at 152.816 kb on - strand, within H281DRAFT_05390 at 152.816 kb on - strand, within H281DRAFT_05390 at 152.816 kb on - strand, within H281DRAFT_05390 at 153.470 kb on - strand at 153.597 kb on + strand at 153.597 kb on + strand at 153.629 kb on + strand, within H281DRAFT_05391 at 153.629 kb on + strand, within H281DRAFT_05391 at 153.629 kb on + strand, within H281DRAFT_05391 at 153.700 kb on - strand, within H281DRAFT_05391 at 153.783 kb on + strand, within H281DRAFT_05391 at 153.784 kb on - strand, within H281DRAFT_05391 at 153.898 kb on - strand, within H281DRAFT_05391 at 153.898 kb on - strand, within H281DRAFT_05391 at 153.898 kb on - strand, within H281DRAFT_05391 at 154.027 kb on - strand, within H281DRAFT_05391 at 154.027 kb on - strand, within H281DRAFT_05391 at 154.095 kb on + strand, within H281DRAFT_05391 at 154.095 kb on + strand, within H281DRAFT_05391 at 154.233 kb on + strand, within H281DRAFT_05391 at 154.233 kb on + strand, within H281DRAFT_05391 at 154.233 kb on + strand, within H281DRAFT_05391 at 154.234 kb on - strand, within H281DRAFT_05391 at 154.234 kb on - strand, within H281DRAFT_05391 at 154.290 kb on + strand, within H281DRAFT_05391 at 154.291 kb on - strand, within H281DRAFT_05391 at 154.398 kb on - strand at 154.419 kb on + strand at 154.458 kb on + strand at 154.459 kb on - strand at 154.714 kb on + strand, within H281DRAFT_05392 at 154.741 kb on + strand, within H281DRAFT_05392 at 154.742 kb on - strand, within H281DRAFT_05392 at 154.973 kb on - strand, within H281DRAFT_05392 at 154.973 kb on - strand, within H281DRAFT_05392 at 155.147 kb on - strand, within H281DRAFT_05392 at 155.261 kb on - strand, within H281DRAFT_05392 at 155.261 kb on - strand, within H281DRAFT_05392 at 155.284 kb on + strand, within H281DRAFT_05392 at 155.285 kb on - strand, within H281DRAFT_05392
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 152,815 + H281DRAFT_05390 0.40 -0.5 152,815 + H281DRAFT_05390 0.40 -0.5 152,816 - H281DRAFT_05390 0.40 +0.1 152,816 - H281DRAFT_05390 0.40 +0.2 152,816 - H281DRAFT_05390 0.40 -0.1 153,470 - +0.8 153,597 + +0.2 153,597 + +0.4 153,629 + H281DRAFT_05391 0.10 -0.3 153,629 + H281DRAFT_05391 0.10 -0.2 153,629 + H281DRAFT_05391 0.10 -1.2 153,700 - H281DRAFT_05391 0.18 -0.3 153,783 + H281DRAFT_05391 0.28 +1.3 153,784 - H281DRAFT_05391 0.28 +0.4 153,898 - H281DRAFT_05391 0.41 -0.1 153,898 - H281DRAFT_05391 0.41 +0.9 153,898 - H281DRAFT_05391 0.41 +0.3 154,027 - H281DRAFT_05391 0.56 +0.8 154,027 - H281DRAFT_05391 0.56 +1.7 154,095 + H281DRAFT_05391 0.64 +0.2 154,095 + H281DRAFT_05391 0.64 -0.6 154,233 + H281DRAFT_05391 0.79 -0.2 154,233 + H281DRAFT_05391 0.79 -0.3 154,233 + H281DRAFT_05391 0.79 -0.8 154,234 - H281DRAFT_05391 0.80 +1.8 154,234 - H281DRAFT_05391 0.80 +0.9 154,290 + H281DRAFT_05391 0.86 -0.0 154,291 - H281DRAFT_05391 0.86 +1.5 154,398 - +0.2 154,419 + -0.9 154,458 + +0.1 154,459 - +1.5 154,714 + H281DRAFT_05392 0.11 -0.6 154,741 + H281DRAFT_05392 0.14 +1.2 154,742 - H281DRAFT_05392 0.14 -0.4 154,973 - H281DRAFT_05392 0.35 +0.6 154,973 - H281DRAFT_05392 0.35 -1.4 155,147 - H281DRAFT_05392 0.50 +0.0 155,261 - H281DRAFT_05392 0.60 -0.7 155,261 - H281DRAFT_05392 0.60 -1.0 155,284 + H281DRAFT_05392 0.63 +1.5 155,285 - H281DRAFT_05392 0.63 -1.1
Or see this region's nucleotide sequence