Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05115 and H281DRAFT_05116 are separated by 89 nucleotides H281DRAFT_05116 and H281DRAFT_05117 are separated by 171 nucleotides H281DRAFT_05117 and H281DRAFT_05118 are separated by 102 nucleotides
H281DRAFT_05115: H281DRAFT_05115 - dihydrolipoamide dehydrogenase, at 65,144 to 66,574
_05115
H281DRAFT_05116: H281DRAFT_05116 - cell division protein ZapE, at 66,664 to 67,761
_05116
H281DRAFT_05117: H281DRAFT_05117 - Transposase and inactivated derivatives, at 67,933 to 68,406
_05117
H281DRAFT_05118: H281DRAFT_05118 - Uncharacterized conserved protein, DUF2147 family, at 68,509 to 68,994
_05118
Position (kb) 66
67
68 Strain fitness (log2 ratio) -2
-1
0
1
2 at 66.572 kb on + strand at 66.572 kb on + strand at 66.573 kb on - strand at 66.573 kb on - strand at 66.598 kb on + strand at 66.599 kb on - strand at 66.599 kb on - strand at 66.682 kb on + strand at 66.778 kb on + strand, within H281DRAFT_05116 at 66.845 kb on - strand, within H281DRAFT_05116 at 66.895 kb on + strand, within H281DRAFT_05116 at 66.896 kb on - strand, within H281DRAFT_05116 at 66.896 kb on - strand, within H281DRAFT_05116 at 67.031 kb on - strand, within H281DRAFT_05116 at 67.147 kb on + strand, within H281DRAFT_05116 at 67.147 kb on + strand, within H281DRAFT_05116 at 67.147 kb on + strand, within H281DRAFT_05116 at 67.148 kb on - strand, within H281DRAFT_05116 at 67.166 kb on - strand, within H281DRAFT_05116 at 67.212 kb on + strand, within H281DRAFT_05116 at 67.213 kb on - strand, within H281DRAFT_05116 at 67.592 kb on - strand, within H281DRAFT_05116 at 67.645 kb on + strand, within H281DRAFT_05116 at 67.809 kb on + strand at 67.809 kb on + strand at 67.837 kb on + strand at 67.837 kb on + strand at 68.074 kb on + strand, within H281DRAFT_05117 at 68.074 kb on + strand, within H281DRAFT_05117 at 68.074 kb on + strand, within H281DRAFT_05117 at 68.074 kb on + strand, within H281DRAFT_05117 at 68.075 kb on - strand, within H281DRAFT_05117 at 68.075 kb on - strand, within H281DRAFT_05117 at 68.075 kb on - strand, within H281DRAFT_05117 at 68.153 kb on - strand, within H281DRAFT_05117 at 68.165 kb on + strand, within H281DRAFT_05117 at 68.166 kb on - strand, within H281DRAFT_05117 at 68.168 kb on + strand, within H281DRAFT_05117 at 68.168 kb on + strand, within H281DRAFT_05117 at 68.451 kb on + strand at 68.452 kb on - strand at 68.452 kb on - strand at 68.511 kb on - strand at 68.562 kb on - strand, within H281DRAFT_05118 at 68.562 kb on - strand, within H281DRAFT_05118 at 68.562 kb on - strand, within H281DRAFT_05118 at 68.615 kb on + strand, within H281DRAFT_05118 at 68.616 kb on - strand, within H281DRAFT_05118 at 68.616 kb on - strand, within H281DRAFT_05118 at 68.617 kb on + strand, within H281DRAFT_05118 at 68.617 kb on + strand, within H281DRAFT_05118 at 68.617 kb on + strand, within H281DRAFT_05118 at 68.618 kb on - strand, within H281DRAFT_05118 at 68.731 kb on - strand, within H281DRAFT_05118 at 68.740 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 66,572 + -1.1 66,572 + -1.1 66,573 - -1.8 66,573 - -0.8 66,598 + -1.2 66,599 - +0.1 66,599 - -0.1 66,682 + -0.6 66,778 + H281DRAFT_05116 0.10 -2.7 66,845 - H281DRAFT_05116 0.16 -1.1 66,895 + H281DRAFT_05116 0.21 -0.1 66,896 - H281DRAFT_05116 0.21 -1.6 66,896 - H281DRAFT_05116 0.21 -1.6 67,031 - H281DRAFT_05116 0.33 -2.7 67,147 + H281DRAFT_05116 0.44 -0.6 67,147 + H281DRAFT_05116 0.44 -0.1 67,147 + H281DRAFT_05116 0.44 -0.8 67,148 - H281DRAFT_05116 0.44 -1.7 67,166 - H281DRAFT_05116 0.46 +2.0 67,212 + H281DRAFT_05116 0.50 -1.4 67,213 - H281DRAFT_05116 0.50 -1.5 67,592 - H281DRAFT_05116 0.85 -1.9 67,645 + H281DRAFT_05116 0.89 -1.1 67,809 + +1.9 67,809 + -0.9 67,837 + +0.4 67,837 + +0.3 68,074 + H281DRAFT_05117 0.30 +0.2 68,074 + H281DRAFT_05117 0.30 +0.5 68,074 + H281DRAFT_05117 0.30 +1.6 68,074 + H281DRAFT_05117 0.30 -1.2 68,075 - H281DRAFT_05117 0.30 +0.1 68,075 - H281DRAFT_05117 0.30 -0.1 68,075 - H281DRAFT_05117 0.30 -1.0 68,153 - H281DRAFT_05117 0.46 +0.2 68,165 + H281DRAFT_05117 0.49 +0.1 68,166 - H281DRAFT_05117 0.49 -1.7 68,168 + H281DRAFT_05117 0.50 -0.1 68,168 + H281DRAFT_05117 0.50 -0.8 68,451 + -0.3 68,452 - -0.4 68,452 - -0.1 68,511 - -0.3 68,562 - H281DRAFT_05118 0.11 +0.2 68,562 - H281DRAFT_05118 0.11 +1.6 68,562 - H281DRAFT_05118 0.11 +1.0 68,615 + H281DRAFT_05118 0.22 +0.0 68,616 - H281DRAFT_05118 0.22 -0.9 68,616 - H281DRAFT_05118 0.22 -0.2 68,617 + H281DRAFT_05118 0.22 -0.0 68,617 + H281DRAFT_05118 0.22 +0.1 68,617 + H281DRAFT_05118 0.22 -0.4 68,618 - H281DRAFT_05118 0.22 -1.1 68,731 - H281DRAFT_05118 0.46 +0.5 68,740 - +2.4
Or see this region's nucleotide sequence