Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04709 and H281DRAFT_04710 are separated by 145 nucleotides H281DRAFT_04710 and H281DRAFT_04711 are separated by 144 nucleotides
H281DRAFT_04709: H281DRAFT_04709 - Predicted PurR-regulated permease PerM, at 121,828 to 122,904
_04709
H281DRAFT_04710: H281DRAFT_04710 - phosphoribosylformylglycinamidine cyclo-ligase, at 123,050 to 124,117
_04710
H281DRAFT_04711: H281DRAFT_04711 - tRNA dimethylallyltransferase, at 124,262 to 125,242
_04711
Position (kb) 123
124
125 Strain fitness (log2 ratio) -2
-1
0
1
2 at 122.142 kb on - strand, within H281DRAFT_04709 at 122.252 kb on - strand, within H281DRAFT_04709 at 122.252 kb on - strand, within H281DRAFT_04709 at 122.382 kb on - strand, within H281DRAFT_04709 at 122.390 kb on - strand, within H281DRAFT_04709 at 122.390 kb on - strand, within H281DRAFT_04709 at 122.466 kb on - strand, within H281DRAFT_04709 at 122.519 kb on - strand, within H281DRAFT_04709 at 122.766 kb on - strand, within H281DRAFT_04709 at 122.966 kb on - strand at 122.995 kb on - strand at 123.027 kb on + strand at 123.401 kb on + strand, within H281DRAFT_04710 at 123.402 kb on - strand, within H281DRAFT_04710 at 123.402 kb on - strand, within H281DRAFT_04710 at 123.402 kb on - strand, within H281DRAFT_04710 at 123.525 kb on - strand, within H281DRAFT_04710 at 123.761 kb on + strand, within H281DRAFT_04710 at 123.761 kb on + strand at 124.115 kb on + strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.143 kb on + strand at 124.144 kb on - strand at 124.146 kb on + strand at 124.191 kb on + strand at 124.192 kb on - strand at 124.215 kb on + strand at 124.216 kb on - strand at 124.263 kb on + strand at 124.263 kb on + strand at 124.264 kb on - strand at 124.264 kb on - strand at 124.995 kb on + strand, within H281DRAFT_04711
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 122,142 - H281DRAFT_04709 0.29 +2.0 122,252 - H281DRAFT_04709 0.39 +0.4 122,252 - H281DRAFT_04709 0.39 +0.8 122,382 - H281DRAFT_04709 0.51 +0.1 122,390 - H281DRAFT_04709 0.52 -1.6 122,390 - H281DRAFT_04709 0.52 -0.1 122,466 - H281DRAFT_04709 0.59 +0.8 122,519 - H281DRAFT_04709 0.64 +0.3 122,766 - H281DRAFT_04709 0.87 +0.4 122,966 - -0.9 122,995 - +1.2 123,027 + -1.0 123,401 + H281DRAFT_04710 0.33 -1.4 123,402 - H281DRAFT_04710 0.33 -0.6 123,402 - H281DRAFT_04710 0.33 -0.1 123,402 - H281DRAFT_04710 0.33 +0.4 123,525 - H281DRAFT_04710 0.44 -0.9 123,761 + H281DRAFT_04710 0.67 +0.4 123,761 + +1.4 124,115 + +0.6 124,116 - -0.8 124,116 - +0.9 124,116 - +0.9 124,143 + -0.1 124,144 - -0.8 124,146 + -1.7 124,191 + +0.3 124,192 - -0.4 124,215 + -0.7 124,216 - -1.0 124,263 + -0.3 124,263 + -2.4 124,264 - -0.4 124,264 - +0.2 124,995 + H281DRAFT_04711 0.75 -0.9
Or see this region's nucleotide sequence