Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04671 and H281DRAFT_04672 are separated by 167 nucleotides H281DRAFT_04672 and H281DRAFT_04673 are separated by 147 nucleotides
H281DRAFT_04671: H281DRAFT_04671 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 73,820 to 74,887
_04671
H281DRAFT_04672: H281DRAFT_04672 - ATP-dependent DNA helicase RecG, at 75,055 to 77,445
_04672
H281DRAFT_04673: H281DRAFT_04673 - transcriptional regulator, LysR family, at 77,593 to 78,552
_04673
Position (kb) 75
76
77
78 Strain fitness (log2 ratio) -2
-1
0
1
2 at 74.388 kb on + strand, within H281DRAFT_04671 at 74.496 kb on + strand, within H281DRAFT_04671 at 74.497 kb on - strand, within H281DRAFT_04671 at 74.497 kb on - strand, within H281DRAFT_04671 at 74.690 kb on - strand, within H281DRAFT_04671 at 74.944 kb on + strand at 75.017 kb on + strand at 75.038 kb on + strand at 75.039 kb on - strand at 75.039 kb on - strand at 75.460 kb on + strand, within H281DRAFT_04672 at 75.632 kb on - strand, within H281DRAFT_04672 at 76.681 kb on + strand, within H281DRAFT_04672 at 76.681 kb on + strand, within H281DRAFT_04672 at 76.682 kb on - strand, within H281DRAFT_04672 at 76.700 kb on + strand, within H281DRAFT_04672 at 76.980 kb on + strand, within H281DRAFT_04672 at 77.155 kb on + strand at 77.155 kb on + strand, within H281DRAFT_04672 at 77.378 kb on - strand at 77.444 kb on - strand at 77.541 kb on + strand at 77.615 kb on - strand at 77.615 kb on - strand at 77.727 kb on - strand, within H281DRAFT_04673 at 77.888 kb on - strand, within H281DRAFT_04673 at 77.902 kb on + strand, within H281DRAFT_04673 at 77.903 kb on - strand, within H281DRAFT_04673 at 77.903 kb on - strand, within H281DRAFT_04673 at 78.395 kb on - strand, within H281DRAFT_04673 at 78.395 kb on - strand, within H281DRAFT_04673 at 78.395 kb on - strand, within H281DRAFT_04673 at 78.395 kb on - strand, within H281DRAFT_04673
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 74,388 + H281DRAFT_04671 0.53 -2.0 74,496 + H281DRAFT_04671 0.63 -1.6 74,497 - H281DRAFT_04671 0.63 -1.6 74,497 - H281DRAFT_04671 0.63 -2.0 74,690 - H281DRAFT_04671 0.81 -1.3 74,944 + +0.1 75,017 + -0.6 75,038 + -1.0 75,039 - +0.8 75,039 - -0.7 75,460 + H281DRAFT_04672 0.17 -1.1 75,632 - H281DRAFT_04672 0.24 -1.4 76,681 + H281DRAFT_04672 0.68 -1.6 76,681 + H281DRAFT_04672 0.68 +1.1 76,682 - H281DRAFT_04672 0.68 -2.1 76,700 + H281DRAFT_04672 0.69 -1.4 76,980 + H281DRAFT_04672 0.81 -1.6 77,155 + +0.4 77,155 + H281DRAFT_04672 0.88 +0.9 77,378 - +0.2 77,444 - +1.9 77,541 + -0.7 77,615 - +2.5 77,615 - -1.0 77,727 - H281DRAFT_04673 0.14 +0.6 77,888 - H281DRAFT_04673 0.31 -0.8 77,902 + H281DRAFT_04673 0.32 -0.6 77,903 - H281DRAFT_04673 0.32 +0.2 77,903 - H281DRAFT_04673 0.32 -0.6 78,395 - H281DRAFT_04673 0.84 -0.1 78,395 - H281DRAFT_04673 0.84 +0.4 78,395 - H281DRAFT_04673 0.84 +0.2 78,395 - H281DRAFT_04673 0.84 -0.1
Or see this region's nucleotide sequence