Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04119 and H281DRAFT_04120 are separated by 269 nucleotides H281DRAFT_04120 and H281DRAFT_04121 are separated by 273 nucleotides
H281DRAFT_04119: H281DRAFT_04119 - ornithine carbamoyltransferase, at 229,812 to 230,741
_04119
H281DRAFT_04120: H281DRAFT_04120 - argininosuccinate synthase, at 231,011 to 232,237
_04120
H281DRAFT_04121: H281DRAFT_04121 - UDP-N-acetylmuramate dehydrogenase, at 232,511 to 233,557
_04121
Position (kb) 231
232
233 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 230.150 kb on + strand, within H281DRAFT_04119 at 230.150 kb on + strand, within H281DRAFT_04119 at 230.304 kb on - strand, within H281DRAFT_04119 at 230.663 kb on - strand at 230.663 kb on - strand at 230.713 kb on - strand at 230.941 kb on + strand at 230.941 kb on + strand at 231.000 kb on - strand at 231.000 kb on - strand at 231.042 kb on - strand at 231.092 kb on + strand at 231.092 kb on + strand at 231.093 kb on - strand at 231.093 kb on - strand at 231.266 kb on + strand, within H281DRAFT_04120 at 231.267 kb on - strand, within H281DRAFT_04120 at 231.278 kb on + strand, within H281DRAFT_04120 at 231.278 kb on + strand, within H281DRAFT_04120 at 231.413 kb on + strand, within H281DRAFT_04120 at 231.413 kb on + strand at 231.414 kb on - strand, within H281DRAFT_04120 at 231.416 kb on + strand, within H281DRAFT_04120 at 231.495 kb on - strand, within H281DRAFT_04120 at 231.680 kb on + strand, within H281DRAFT_04120 at 231.680 kb on + strand, within H281DRAFT_04120 at 231.680 kb on + strand, within H281DRAFT_04120 at 231.681 kb on - strand, within H281DRAFT_04120 at 231.818 kb on + strand, within H281DRAFT_04120 at 231.845 kb on + strand, within H281DRAFT_04120 at 231.902 kb on - strand, within H281DRAFT_04120 at 231.965 kb on + strand, within H281DRAFT_04120 at 232.061 kb on + strand, within H281DRAFT_04120 at 232.062 kb on - strand, within H281DRAFT_04120 at 232.151 kb on + strand at 232.151 kb on + strand at 232.198 kb on + strand at 232.389 kb on + strand at 232.486 kb on - strand at 232.486 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 230,150 + H281DRAFT_04119 0.36 +1.4 230,150 + H281DRAFT_04119 0.36 -3.2 230,304 - H281DRAFT_04119 0.53 -1.9 230,663 - +1.4 230,663 - -1.2 230,713 - +1.4 230,941 + +0.1 230,941 + -0.3 231,000 - -3.7 231,000 - -1.9 231,042 - -1.9 231,092 + -2.6 231,092 + -3.5 231,093 - -2.7 231,093 - -2.4 231,266 + H281DRAFT_04120 0.21 -3.5 231,267 - H281DRAFT_04120 0.21 -2.3 231,278 + H281DRAFT_04120 0.22 +0.4 231,278 + H281DRAFT_04120 0.22 +0.4 231,413 + H281DRAFT_04120 0.33 -3.4 231,413 + -1.2 231,414 - H281DRAFT_04120 0.33 -1.6 231,416 + H281DRAFT_04120 0.33 +0.4 231,495 - H281DRAFT_04120 0.39 -1.4 231,680 + H281DRAFT_04120 0.55 -3.3 231,680 + H281DRAFT_04120 0.55 -3.2 231,680 + H281DRAFT_04120 0.55 -2.7 231,681 - H281DRAFT_04120 0.55 -1.9 231,818 + H281DRAFT_04120 0.66 -1.8 231,845 + H281DRAFT_04120 0.68 -3.5 231,902 - H281DRAFT_04120 0.73 +0.8 231,965 + H281DRAFT_04120 0.78 -2.7 232,061 + H281DRAFT_04120 0.86 -3.7 232,062 - H281DRAFT_04120 0.86 -1.6 232,151 + -0.9 232,151 + -3.2 232,198 + -4.0 232,389 + -0.9 232,486 - -0.0 232,486 - -0.3
Or see this region's nucleotide sequence