Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03906 and H281DRAFT_03907 are separated by 241 nucleotides H281DRAFT_03907 and H281DRAFT_03908 overlap by 35 nucleotides H281DRAFT_03908 and H281DRAFT_03909 are separated by 55 nucleotides
H281DRAFT_03906: H281DRAFT_03906 - D-methionine transport system ATP-binding protein, at 2,346 to 3,380
_03906
H281DRAFT_03907: H281DRAFT_03907 - Lysophospholipase, alpha-beta hydrolase superfamily, at 3,622 to 4,575
_03907
H281DRAFT_03908: H281DRAFT_03908 - Enoyl-CoA hydratase/carnithine racemase, at 4,541 to 5,341
_03908
H281DRAFT_03909: H281DRAFT_03909 - Acetoin utilization deacetylase AcuC, at 5,397 to 6,371
_03909
Position (kb) 3
4
5 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 3.082 kb on + strand, within H281DRAFT_03906 at 3.082 kb on + strand, within H281DRAFT_03906 at 3.369 kb on + strand at 3.369 kb on + strand at 3.370 kb on - strand at 3.450 kb on + strand at 3.475 kb on - strand at 3.479 kb on + strand at 3.479 kb on + strand at 3.527 kb on - strand at 3.731 kb on - strand, within H281DRAFT_03907 at 3.746 kb on + strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.899 kb on - strand, within H281DRAFT_03907 at 3.899 kb on - strand, within H281DRAFT_03907 at 3.919 kb on + strand, within H281DRAFT_03907 at 3.919 kb on + strand, within H281DRAFT_03907 at 3.941 kb on + strand, within H281DRAFT_03907 at 3.996 kb on + strand, within H281DRAFT_03907 at 3.996 kb on + strand at 3.996 kb on + strand, within H281DRAFT_03907 at 4.024 kb on + strand, within H281DRAFT_03907 at 4.025 kb on - strand, within H281DRAFT_03907 at 4.444 kb on + strand, within H281DRAFT_03907 at 4.444 kb on + strand, within H281DRAFT_03907 at 4.445 kb on - strand, within H281DRAFT_03907 at 4.726 kb on + strand, within H281DRAFT_03908 at 4.727 kb on - strand, within H281DRAFT_03908 at 4.966 kb on + strand, within H281DRAFT_03908 at 4.966 kb on + strand, within H281DRAFT_03908 at 4.966 kb on + strand, within H281DRAFT_03908 at 4.967 kb on - strand, within H281DRAFT_03908 at 5.082 kb on + strand, within H281DRAFT_03908 at 5.085 kb on + strand, within H281DRAFT_03908 at 5.289 kb on + strand at 5.378 kb on + strand at 5.458 kb on + strand at 5.459 kb on - strand at 5.515 kb on - strand, within H281DRAFT_03909 at 5.540 kb on - strand, within H281DRAFT_03909 at 5.540 kb on - strand, within H281DRAFT_03909
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 3,082 + H281DRAFT_03906 0.71 -0.2 3,082 + H281DRAFT_03906 0.71 +0.3 3,369 + -0.2 3,369 + -0.4 3,370 - -1.9 3,450 + -0.5 3,475 - +0.7 3,479 + -0.8 3,479 + -0.2 3,527 - +0.3 3,731 - H281DRAFT_03907 0.11 +1.0 3,746 + H281DRAFT_03907 0.13 -0.1 3,747 - H281DRAFT_03907 0.13 +0.4 3,747 - H281DRAFT_03907 0.13 +0.3 3,747 - H281DRAFT_03907 0.13 -0.4 3,747 - H281DRAFT_03907 0.13 -0.9 3,747 - H281DRAFT_03907 0.13 +0.8 3,898 + H281DRAFT_03907 0.29 -1.4 3,898 + H281DRAFT_03907 0.29 -0.1 3,898 + H281DRAFT_03907 0.29 -0.1 3,898 + H281DRAFT_03907 0.29 +0.7 3,898 + H281DRAFT_03907 0.29 -1.0 3,899 - H281DRAFT_03907 0.29 -0.9 3,899 - H281DRAFT_03907 0.29 -0.2 3,919 + H281DRAFT_03907 0.31 -0.9 3,919 + H281DRAFT_03907 0.31 -1.6 3,941 + H281DRAFT_03907 0.33 +0.2 3,996 + H281DRAFT_03907 0.39 -1.1 3,996 + +1.0 3,996 + H281DRAFT_03907 0.39 -0.3 4,024 + H281DRAFT_03907 0.42 +0.2 4,025 - H281DRAFT_03907 0.42 -0.2 4,444 + H281DRAFT_03907 0.86 -0.2 4,444 + H281DRAFT_03907 0.86 +0.2 4,445 - H281DRAFT_03907 0.86 -0.0 4,726 + H281DRAFT_03908 0.23 -0.7 4,727 - H281DRAFT_03908 0.23 -0.3 4,966 + H281DRAFT_03908 0.53 +0.2 4,966 + H281DRAFT_03908 0.53 +0.1 4,966 + H281DRAFT_03908 0.53 +3.4 4,967 - H281DRAFT_03908 0.53 +0.6 5,082 + H281DRAFT_03908 0.68 +0.5 5,085 + H281DRAFT_03908 0.68 +0.2 5,289 + +0.1 5,378 + -0.5 5,458 + -0.4 5,459 - -1.3 5,515 - H281DRAFT_03909 0.12 -0.7 5,540 - H281DRAFT_03909 0.15 -1.6 5,540 - H281DRAFT_03909 0.15 -0.1
Or see this region's nucleotide sequence