Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03275 and H281DRAFT_03276 are separated by 91 nucleotides H281DRAFT_03276 and H281DRAFT_03277 are separated by 140 nucleotides H281DRAFT_03277 and H281DRAFT_03278 are separated by 205 nucleotides
H281DRAFT_03275: H281DRAFT_03275 - Threonine dehydrogenase, at 331,584 to 332,753
_03275
H281DRAFT_03276: H281DRAFT_03276 - hypothetical protein, at 332,845 to 333,456
_03276
H281DRAFT_03277: H281DRAFT_03277 - hypothetical protein, at 333,597 to 333,854
_03277
H281DRAFT_03278: H281DRAFT_03278 - Threonine dehydrogenase, at 334,060 to 335,268
_03278
Position (kb) 333
334 Strain fitness (log2 ratio) -1
0
1 at 332.698 kb on - strand at 332.794 kb on + strand at 332.939 kb on - strand, within H281DRAFT_03276 at 332.939 kb on - strand, within H281DRAFT_03276 at 333.065 kb on + strand, within H281DRAFT_03276 at 333.277 kb on + strand, within H281DRAFT_03276 at 333.277 kb on + strand, within H281DRAFT_03276 at 333.455 kb on - strand at 333.472 kb on + strand at 333.686 kb on - strand, within H281DRAFT_03277 at 334.019 kb on + strand at 334.074 kb on - strand at 334.189 kb on - strand, within H281DRAFT_03278
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 332,698 - -0.8 332,794 + -1.5 332,939 - H281DRAFT_03276 0.15 +1.0 332,939 - H281DRAFT_03276 0.15 -1.1 333,065 + H281DRAFT_03276 0.36 +0.4 333,277 + H281DRAFT_03276 0.71 -0.1 333,277 + H281DRAFT_03276 0.71 -0.4 333,455 - +0.2 333,472 + +0.1 333,686 - H281DRAFT_03277 0.34 -1.1 334,019 + -0.5 334,074 - +0.9 334,189 - H281DRAFT_03278 0.11 -0.6
Or see this region's nucleotide sequence