Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02472 and H281DRAFT_02473 are separated by 4 nucleotides H281DRAFT_02473 and H281DRAFT_02474 overlap by 4 nucleotides H281DRAFT_02474 and H281DRAFT_02475 are separated by 73 nucleotides
H281DRAFT_02472: H281DRAFT_02472 - Fe-S oxidoreductase, at 42,304 to 44,217
_02472
H281DRAFT_02473: H281DRAFT_02473 - electron transfer flavoprotein alpha subunit apoprotein, at 44,222 to 45,391
_02473
H281DRAFT_02474: H281DRAFT_02474 - electron transfer flavoprotein beta subunit, at 45,388 to 46,164
_02474
H281DRAFT_02475: H281DRAFT_02475 - Rieske 2Fe-2S family protein, at 46,238 to 47,542
_02475
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1 at 43.436 kb on - strand, within H281DRAFT_02472 at 43.795 kb on + strand, within H281DRAFT_02472 at 43.796 kb on - strand, within H281DRAFT_02472 at 43.796 kb on - strand, within H281DRAFT_02472 at 43.802 kb on + strand, within H281DRAFT_02472 at 43.803 kb on - strand, within H281DRAFT_02472 at 44.181 kb on - strand at 44.636 kb on + strand, within H281DRAFT_02473 at 45.146 kb on + strand, within H281DRAFT_02473 at 45.147 kb on - strand, within H281DRAFT_02473 at 45.661 kb on + strand, within H281DRAFT_02474 at 45.896 kb on - strand, within H281DRAFT_02474 at 45.896 kb on - strand, within H281DRAFT_02474 at 46.290 kb on - strand at 46.290 kb on - strand at 46.311 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 43,436 - H281DRAFT_02472 0.59 -0.7 43,795 + H281DRAFT_02472 0.78 -0.3 43,796 - H281DRAFT_02472 0.78 -1.3 43,796 - H281DRAFT_02472 0.78 -0.3 43,802 + H281DRAFT_02472 0.78 -0.6 43,803 - H281DRAFT_02472 0.78 -0.7 44,181 - +0.0 44,636 + H281DRAFT_02473 0.35 +0.1 45,146 + H281DRAFT_02473 0.79 -0.4 45,147 - H281DRAFT_02473 0.79 +0.2 45,661 + H281DRAFT_02474 0.35 +0.9 45,896 - H281DRAFT_02474 0.65 -0.5 45,896 - H281DRAFT_02474 0.65 +1.6 46,290 - -0.5 46,290 - +0.8 46,311 - -0.1
Or see this region's nucleotide sequence