Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02257 and H281DRAFT_02258 overlap by 1 nucleotides H281DRAFT_02258 and H281DRAFT_02259 are separated by 76 nucleotides H281DRAFT_02259 and H281DRAFT_02260 are separated by 58 nucleotides
H281DRAFT_02257: H281DRAFT_02257 - HNH endonuclease, at 402,703 to 404,058
_02257
H281DRAFT_02258: H281DRAFT_02258 - DNA adenine methylase, at 404,058 to 404,966
_02258
H281DRAFT_02259: H281DRAFT_02259 - adenine-specific DNA-methyltransferase, at 405,043 to 406,380
_02259
H281DRAFT_02260: H281DRAFT_02260 - Zn-dependent peptidase ImmA, M78 family, at 406,439 to 407,647
_02260
Position (kb) 405
406
407 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 404.059 kb on + strand at 404.060 kb on - strand at 404.072 kb on + strand at 404.075 kb on + strand at 404.207 kb on + strand, within H281DRAFT_02258 at 404.207 kb on + strand, within H281DRAFT_02258 at 404.271 kb on + strand, within H281DRAFT_02258 at 404.349 kb on + strand, within H281DRAFT_02258 at 404.349 kb on + strand, within H281DRAFT_02258 at 404.349 kb on + strand at 404.349 kb on + strand, within H281DRAFT_02258 at 404.353 kb on + strand, within H281DRAFT_02258 at 404.423 kb on + strand, within H281DRAFT_02258 at 404.423 kb on + strand, within H281DRAFT_02258 at 404.556 kb on + strand, within H281DRAFT_02258 at 404.569 kb on + strand, within H281DRAFT_02258 at 404.569 kb on + strand, within H281DRAFT_02258 at 404.592 kb on + strand, within H281DRAFT_02258 at 404.597 kb on + strand, within H281DRAFT_02258 at 404.632 kb on + strand, within H281DRAFT_02258 at 404.659 kb on + strand, within H281DRAFT_02258 at 404.659 kb on + strand, within H281DRAFT_02258 at 404.659 kb on + strand, within H281DRAFT_02258 at 404.760 kb on + strand, within H281DRAFT_02258 at 404.760 kb on + strand, within H281DRAFT_02258 at 404.778 kb on + strand, within H281DRAFT_02258 at 404.778 kb on + strand, within H281DRAFT_02258 at 404.835 kb on + strand, within H281DRAFT_02258 at 404.835 kb on + strand, within H281DRAFT_02258 at 404.835 kb on + strand, within H281DRAFT_02258 at 404.835 kb on + strand, within H281DRAFT_02258 at 404.835 kb on + strand, within H281DRAFT_02258 at 404.839 kb on + strand, within H281DRAFT_02258 at 404.839 kb on + strand, within H281DRAFT_02258 at 404.839 kb on + strand, within H281DRAFT_02258 at 404.839 kb on + strand, within H281DRAFT_02258 at 404.885 kb on + strand at 404.885 kb on + strand at 404.922 kb on + strand at 404.922 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 404.926 kb on + strand at 406.277 kb on + strand at 406.278 kb on - strand at 406.278 kb on - strand at 406.410 kb on - strand at 406.444 kb on + strand at 406.445 kb on - strand at 406.445 kb on - strand at 406.445 kb on - strand at 406.445 kb on - strand at 406.450 kb on + strand at 406.450 kb on + strand at 406.450 kb on + strand at 406.451 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 404,059 + +0.1 404,060 - +0.5 404,072 + -1.2 404,075 + -0.2 404,207 + H281DRAFT_02258 0.16 +0.2 404,207 + H281DRAFT_02258 0.16 -0.6 404,271 + H281DRAFT_02258 0.23 -0.0 404,349 + H281DRAFT_02258 0.32 -0.6 404,349 + H281DRAFT_02258 0.32 -1.1 404,349 + -1.4 404,349 + H281DRAFT_02258 0.32 +0.5 404,353 + H281DRAFT_02258 0.32 -0.7 404,423 + H281DRAFT_02258 0.40 -0.6 404,423 + H281DRAFT_02258 0.40 -0.8 404,556 + H281DRAFT_02258 0.55 -2.1 404,569 + H281DRAFT_02258 0.56 -1.7 404,569 + H281DRAFT_02258 0.56 -1.2 404,592 + H281DRAFT_02258 0.59 -1.6 404,597 + H281DRAFT_02258 0.59 -0.3 404,632 + H281DRAFT_02258 0.63 -2.1 404,659 + H281DRAFT_02258 0.66 -1.0 404,659 + H281DRAFT_02258 0.66 +1.0 404,659 + H281DRAFT_02258 0.66 -1.1 404,760 + H281DRAFT_02258 0.77 +0.2 404,760 + H281DRAFT_02258 0.77 -1.9 404,778 + H281DRAFT_02258 0.79 -2.3 404,778 + H281DRAFT_02258 0.79 -2.2 404,835 + H281DRAFT_02258 0.85 -2.2 404,835 + H281DRAFT_02258 0.85 -1.8 404,835 + H281DRAFT_02258 0.85 -1.5 404,835 + H281DRAFT_02258 0.85 -2.8 404,835 + H281DRAFT_02258 0.85 -2.4 404,839 + H281DRAFT_02258 0.86 -0.0 404,839 + H281DRAFT_02258 0.86 -3.2 404,839 + H281DRAFT_02258 0.86 -2.1 404,839 + H281DRAFT_02258 0.86 -2.4 404,885 + -1.6 404,885 + -1.4 404,922 + -0.4 404,922 + -0.9 404,926 + -1.7 404,926 + -1.8 404,926 + -4.2 404,926 + -2.3 404,926 + -3.7 404,926 + -0.4 404,926 + -1.6 404,926 + +0.8 404,926 + -0.2 406,277 + -0.9 406,278 - -0.2 406,278 - -0.9 406,410 - -0.3 406,444 + -3.1 406,445 - +1.0 406,445 - +0.3 406,445 - -0.6 406,445 - -0.4 406,450 + +0.8 406,450 + +0.3 406,450 + -1.1 406,451 - -0.1
Or see this region's nucleotide sequence