Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02095 and H281DRAFT_02096 overlap by 4 nucleotides H281DRAFT_02096 and H281DRAFT_02097 are separated by 35 nucleotides
H281DRAFT_02095: H281DRAFT_02095 - 8-amino-7-oxononanoate synthase, at 221,665 to 222,849
_02095
H281DRAFT_02096: H281DRAFT_02096 - dethiobiotin synthetase, at 222,846 to 223,574
_02096
H281DRAFT_02097: H281DRAFT_02097 - biotin synthase, at 223,610 to 224,737
_02097
Position (kb) 222
223
224 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 221.870 kb on - strand, within H281DRAFT_02095 at 221.987 kb on - strand, within H281DRAFT_02095 at 222.002 kb on - strand, within H281DRAFT_02095 at 222.086 kb on + strand, within H281DRAFT_02095 at 222.124 kb on + strand, within H281DRAFT_02095 at 222.125 kb on - strand, within H281DRAFT_02095 at 222.450 kb on - strand, within H281DRAFT_02095 at 222.450 kb on - strand, within H281DRAFT_02095 at 222.845 kb on + strand at 222.875 kb on - strand at 223.113 kb on - strand, within H281DRAFT_02096 at 223.113 kb on - strand, within H281DRAFT_02096 at 223.154 kb on + strand, within H281DRAFT_02096 at 223.761 kb on - strand, within H281DRAFT_02097 at 223.761 kb on - strand, within H281DRAFT_02097 at 223.915 kb on + strand, within H281DRAFT_02097 at 224.160 kb on - strand, within H281DRAFT_02097 at 224.162 kb on + strand, within H281DRAFT_02097 at 224.162 kb on + strand, within H281DRAFT_02097 at 224.163 kb on - strand, within H281DRAFT_02097 at 224.223 kb on - strand at 224.223 kb on - strand, within H281DRAFT_02097
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 221,870 - H281DRAFT_02095 0.17 -0.6 221,987 - H281DRAFT_02095 0.27 -2.0 222,002 - H281DRAFT_02095 0.28 -1.8 222,086 + H281DRAFT_02095 0.36 -2.8 222,124 + H281DRAFT_02095 0.39 -2.1 222,125 - H281DRAFT_02095 0.39 -2.4 222,450 - H281DRAFT_02095 0.66 -2.1 222,450 - H281DRAFT_02095 0.66 -1.8 222,845 + -0.1 222,875 - -2.7 223,113 - H281DRAFT_02096 0.37 -2.1 223,113 - H281DRAFT_02096 0.37 -1.2 223,154 + H281DRAFT_02096 0.42 -0.4 223,761 - H281DRAFT_02097 0.13 -1.0 223,761 - H281DRAFT_02097 0.13 -1.6 223,915 + H281DRAFT_02097 0.27 -0.9 224,160 - H281DRAFT_02097 0.49 -1.7 224,162 + H281DRAFT_02097 0.49 -1.6 224,162 + H281DRAFT_02097 0.49 +1.0 224,163 - H281DRAFT_02097 0.49 -2.1 224,223 - +0.4 224,223 - H281DRAFT_02097 0.54 +0.0
Or see this region's nucleotide sequence