Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02093 and H281DRAFT_02094 are separated by 628 nucleotides H281DRAFT_02094 and H281DRAFT_02095 overlap by 1 nucleotides
H281DRAFT_02093: H281DRAFT_02093 - Dienelactone hydrolase, at 218,386 to 219,675
_02093
H281DRAFT_02094: H281DRAFT_02094 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 220,304 to 221,665
_02094
H281DRAFT_02095: H281DRAFT_02095 - 8-amino-7-oxononanoate synthase, at 221,665 to 222,849
_02095
Position (kb) 220
221
222 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 219.359 kb on + strand, within H281DRAFT_02093 at 219.359 kb on + strand at 219.360 kb on - strand, within H281DRAFT_02093 at 219.382 kb on + strand, within H281DRAFT_02093 at 219.517 kb on - strand, within H281DRAFT_02093 at 219.564 kb on + strand at 219.713 kb on + strand at 219.720 kb on + strand at 219.720 kb on + strand at 219.743 kb on + strand at 219.836 kb on + strand at 219.837 kb on - strand at 220.042 kb on + strand at 220.043 kb on - strand at 220.155 kb on + strand at 220.180 kb on + strand at 220.298 kb on + strand at 220.448 kb on + strand, within H281DRAFT_02094 at 220.470 kb on - strand, within H281DRAFT_02094 at 220.769 kb on + strand, within H281DRAFT_02094 at 220.770 kb on - strand, within H281DRAFT_02094 at 220.830 kb on - strand, within H281DRAFT_02094 at 220.935 kb on + strand, within H281DRAFT_02094 at 220.936 kb on - strand, within H281DRAFT_02094 at 221.079 kb on + strand, within H281DRAFT_02094 at 221.082 kb on + strand, within H281DRAFT_02094 at 221.083 kb on - strand, within H281DRAFT_02094 at 221.193 kb on - strand, within H281DRAFT_02094 at 221.285 kb on + strand, within H281DRAFT_02094 at 221.335 kb on - strand, within H281DRAFT_02094 at 221.582 kb on + strand at 221.663 kb on + strand at 221.664 kb on - strand at 221.809 kb on + strand, within H281DRAFT_02095 at 221.870 kb on - strand, within H281DRAFT_02095 at 221.987 kb on - strand, within H281DRAFT_02095 at 222.002 kb on - strand, within H281DRAFT_02095 at 222.086 kb on + strand, within H281DRAFT_02095 at 222.124 kb on + strand, within H281DRAFT_02095 at 222.125 kb on - strand, within H281DRAFT_02095 at 222.450 kb on - strand, within H281DRAFT_02095 at 222.450 kb on - strand, within H281DRAFT_02095
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 219,359 + H281DRAFT_02093 0.75 -1.8 219,359 + -1.1 219,360 - H281DRAFT_02093 0.76 +0.7 219,382 + H281DRAFT_02093 0.77 -1.0 219,517 - H281DRAFT_02093 0.88 +0.7 219,564 + -1.6 219,713 + -1.1 219,720 + -0.2 219,720 + -0.4 219,743 + +0.2 219,836 + -0.4 219,837 - -1.7 220,042 + -0.6 220,043 - -0.3 220,155 + +0.4 220,180 + -0.5 220,298 + -0.9 220,448 + H281DRAFT_02094 0.11 -1.3 220,470 - H281DRAFT_02094 0.12 -1.4 220,769 + H281DRAFT_02094 0.34 -2.3 220,770 - H281DRAFT_02094 0.34 -1.4 220,830 - H281DRAFT_02094 0.39 -0.9 220,935 + H281DRAFT_02094 0.46 -1.1 220,936 - H281DRAFT_02094 0.46 -0.7 221,079 + H281DRAFT_02094 0.57 -1.1 221,082 + H281DRAFT_02094 0.57 -0.4 221,083 - H281DRAFT_02094 0.57 -1.1 221,193 - H281DRAFT_02094 0.65 -2.3 221,285 + H281DRAFT_02094 0.72 -1.8 221,335 - H281DRAFT_02094 0.76 -2.3 221,582 + -1.1 221,663 + +0.1 221,664 - -1.3 221,809 + H281DRAFT_02095 0.12 -0.6 221,870 - H281DRAFT_02095 0.17 -0.6 221,987 - H281DRAFT_02095 0.27 -2.0 222,002 - H281DRAFT_02095 0.28 -1.8 222,086 + H281DRAFT_02095 0.36 -2.8 222,124 + H281DRAFT_02095 0.39 -2.1 222,125 - H281DRAFT_02095 0.39 -2.4 222,450 - H281DRAFT_02095 0.66 -2.1 222,450 - H281DRAFT_02095 0.66 -1.8
Or see this region's nucleotide sequence