Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02079 and H281DRAFT_02080 are separated by 79 nucleotides H281DRAFT_02080 and H281DRAFT_02081 are separated by 185 nucleotides H281DRAFT_02081 and H281DRAFT_02082 are separated by 16 nucleotides
H281DRAFT_02079: H281DRAFT_02079 - arginyl-tRNA synthetase, at 202,582 to 204,384
_02079
H281DRAFT_02080: H281DRAFT_02080 - cell division protein FtsN, at 204,464 to 205,273
_02080
H281DRAFT_02081: H281DRAFT_02081 - thiol:disulfide interchange protein DsbA, at 205,459 to 206,097
_02081
H281DRAFT_02082: H281DRAFT_02082 - Short-chain dehydrogenase, at 206,114 to 206,887
_02082
Position (kb) 204
205
206 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 204.382 kb on + strand at 204.382 kb on + strand at 204.382 kb on + strand at 204.382 kb on + strand at 204.382 kb on + strand at 204.382 kb on + strand at 204.383 kb on - strand at 204.383 kb on - strand at 204.383 kb on - strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.403 kb on + strand at 204.404 kb on - strand at 204.404 kb on - strand at 204.404 kb on - strand at 204.404 kb on - strand at 204.404 kb on - strand at 204.453 kb on + strand at 204.575 kb on + strand, within H281DRAFT_02080 at 204.575 kb on + strand, within H281DRAFT_02080 at 204.575 kb on + strand, within H281DRAFT_02080 at 204.575 kb on + strand, within H281DRAFT_02080 at 204.575 kb on + strand, within H281DRAFT_02080 at 204.575 kb on + strand, within H281DRAFT_02080 at 204.575 kb on + strand, within H281DRAFT_02080 at 204.576 kb on - strand, within H281DRAFT_02080 at 204.576 kb on - strand, within H281DRAFT_02080 at 204.576 kb on - strand, within H281DRAFT_02080 at 204.576 kb on - strand, within H281DRAFT_02080 at 204.576 kb on - strand, within H281DRAFT_02080 at 204.578 kb on - strand, within H281DRAFT_02080 at 204.578 kb on - strand, within H281DRAFT_02080 at 204.578 kb on - strand, within H281DRAFT_02080 at 204.592 kb on + strand, within H281DRAFT_02080 at 204.592 kb on + strand, within H281DRAFT_02080 at 204.657 kb on - strand, within H281DRAFT_02080 at 205.043 kb on + strand, within H281DRAFT_02080 at 205.044 kb on - strand, within H281DRAFT_02080 at 205.064 kb on + strand, within H281DRAFT_02080 at 205.065 kb on - strand, within H281DRAFT_02080 at 205.161 kb on - strand, within H281DRAFT_02080 at 205.161 kb on - strand, within H281DRAFT_02080 at 205.161 kb on - strand, within H281DRAFT_02080 at 205.164 kb on - strand, within H281DRAFT_02080 at 205.164 kb on - strand, within H281DRAFT_02080 at 205.170 kb on + strand, within H281DRAFT_02080 at 205.171 kb on - strand, within H281DRAFT_02080 at 205.175 kb on - strand, within H281DRAFT_02080 at 205.272 kb on - strand at 205.310 kb on + strand at 205.350 kb on + strand at 205.350 kb on + strand at 205.350 kb on + strand at 205.350 kb on + strand at 205.376 kb on + strand at 205.377 kb on - strand at 205.398 kb on - strand at 206.095 kb on + strand at 206.095 kb on + strand at 206.183 kb on + strand at 206.184 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 204,382 + -0.7 204,382 + +0.6 204,382 + -0.1 204,382 + +0.8 204,382 + -0.6 204,382 + -0.6 204,383 - -2.9 204,383 - +1.4 204,383 - -1.9 204,403 + +0.9 204,403 + -0.0 204,403 + +0.3 204,403 + +0.6 204,403 + +1.4 204,403 + +0.6 204,403 + +0.4 204,403 + +0.4 204,403 + -0.2 204,403 + -0.1 204,404 - -1.9 204,404 - -0.4 204,404 - -0.6 204,404 - +0.6 204,404 - -2.2 204,453 + -0.6 204,575 + H281DRAFT_02080 0.14 -3.1 204,575 + H281DRAFT_02080 0.14 -3.2 204,575 + H281DRAFT_02080 0.14 -0.1 204,575 + H281DRAFT_02080 0.14 -0.9 204,575 + H281DRAFT_02080 0.14 -2.1 204,575 + H281DRAFT_02080 0.14 -1.9 204,575 + H281DRAFT_02080 0.14 -2.3 204,576 - H281DRAFT_02080 0.14 -2.0 204,576 - H281DRAFT_02080 0.14 -3.2 204,576 - H281DRAFT_02080 0.14 -1.7 204,576 - H281DRAFT_02080 0.14 -4.0 204,576 - H281DRAFT_02080 0.14 -2.7 204,578 - H281DRAFT_02080 0.14 -2.9 204,578 - H281DRAFT_02080 0.14 -2.6 204,578 - H281DRAFT_02080 0.14 -3.4 204,592 + H281DRAFT_02080 0.16 -2.4 204,592 + H281DRAFT_02080 0.16 -2.9 204,657 - H281DRAFT_02080 0.24 -2.8 205,043 + H281DRAFT_02080 0.71 -0.1 205,044 - H281DRAFT_02080 0.72 -0.4 205,064 + H281DRAFT_02080 0.74 -1.6 205,065 - H281DRAFT_02080 0.74 -1.4 205,161 - H281DRAFT_02080 0.86 -0.9 205,161 - H281DRAFT_02080 0.86 -1.4 205,161 - H281DRAFT_02080 0.86 -1.1 205,164 - H281DRAFT_02080 0.86 -0.7 205,164 - H281DRAFT_02080 0.86 +0.4 205,170 + H281DRAFT_02080 0.87 -0.9 205,171 - H281DRAFT_02080 0.87 -0.5 205,175 - H281DRAFT_02080 0.88 +0.1 205,272 - -0.3 205,310 + +1.4 205,350 + -0.5 205,350 + +0.2 205,350 + +1.9 205,350 + +0.0 205,376 + +2.2 205,377 - -0.5 205,398 - +1.6 206,095 + -1.0 206,095 + -0.1 206,183 + -0.0 206,184 - -0.7
Or see this region's nucleotide sequence