Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02046 and H281DRAFT_02047 are separated by 207 nucleotides H281DRAFT_02047 and H281DRAFT_02048 are separated by 213 nucleotides
H281DRAFT_02046: H281DRAFT_02046 - phosphate:Na+ symporter, at 169,678 to 171,345
_02046
H281DRAFT_02047: H281DRAFT_02047 - HAD-superfamily subfamily IB hydrolase, TIGR01490, at 171,553 to 172,236
_02047
H281DRAFT_02048: H281DRAFT_02048 - lipoic acid synthetase, at 172,450 to 173,457
_02048
Position (kb) 171
172
173 Strain fitness (log2 ratio) -1
0
1
2 at 170.950 kb on - strand, within H281DRAFT_02046 at 171.034 kb on + strand, within H281DRAFT_02046 at 171.035 kb on - strand, within H281DRAFT_02046 at 171.035 kb on - strand, within H281DRAFT_02046 at 171.288 kb on + strand at 171.345 kb on + strand at 171.345 kb on + strand at 171.345 kb on + strand at 171.346 kb on - strand at 171.346 kb on - strand at 171.346 kb on - strand at 171.359 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.413 kb on + strand at 171.414 kb on - strand at 171.414 kb on - strand at 171.414 kb on - strand at 171.415 kb on + strand at 171.415 kb on + strand at 171.415 kb on + strand at 171.415 kb on + strand at 171.415 kb on + strand at 171.416 kb on - strand at 171.416 kb on - strand at 171.423 kb on + strand at 171.450 kb on - strand at 171.469 kb on + strand at 171.647 kb on + strand, within H281DRAFT_02047 at 171.685 kb on + strand, within H281DRAFT_02047 at 171.736 kb on + strand, within H281DRAFT_02047 at 171.736 kb on + strand, within H281DRAFT_02047 at 171.859 kb on - strand, within H281DRAFT_02047 at 172.061 kb on + strand, within H281DRAFT_02047 at 172.061 kb on + strand, within H281DRAFT_02047 at 172.062 kb on - strand, within H281DRAFT_02047 at 172.108 kb on + strand, within H281DRAFT_02047 at 172.361 kb on + strand at 172.457 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 170,950 - H281DRAFT_02046 0.76 -0.9 171,034 + H281DRAFT_02046 0.81 -0.7 171,035 - H281DRAFT_02046 0.81 +1.4 171,035 - H281DRAFT_02046 0.81 +0.1 171,288 + +2.1 171,345 + -1.1 171,345 + -0.4 171,345 + +0.7 171,346 - -1.0 171,346 - +1.0 171,346 - -0.2 171,359 + -0.3 171,413 + -0.3 171,413 + -0.9 171,413 + +0.0 171,413 + -0.0 171,413 + +0.6 171,413 + -0.6 171,413 + +2.2 171,413 + -0.1 171,413 + -0.4 171,413 + -1.6 171,413 + -0.1 171,414 - -1.2 171,414 - -0.0 171,414 - -1.4 171,415 + -0.1 171,415 + +0.2 171,415 + -0.5 171,415 + +0.4 171,415 + -0.0 171,416 - -0.1 171,416 - +1.0 171,423 + -0.5 171,450 - -1.1 171,469 + -0.9 171,647 + H281DRAFT_02047 0.14 +0.2 171,685 + H281DRAFT_02047 0.19 -1.1 171,736 + H281DRAFT_02047 0.27 -0.3 171,736 + H281DRAFT_02047 0.27 -0.7 171,859 - H281DRAFT_02047 0.45 -0.8 172,061 + H281DRAFT_02047 0.74 -0.3 172,061 + H281DRAFT_02047 0.74 -0.4 172,062 - H281DRAFT_02047 0.74 -0.3 172,108 + H281DRAFT_02047 0.81 -0.8 172,361 + -1.4 172,457 - +0.0
Or see this region's nucleotide sequence