Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01771 and H281DRAFT_01772 are separated by 43 nucleotides H281DRAFT_01772 and H281DRAFT_01773 are separated by 193 nucleotides H281DRAFT_01773 and H281DRAFT_01774 are separated by 136 nucleotides
H281DRAFT_01771: H281DRAFT_01771 - Pimeloyl-ACP methyl ester carboxylesterase, at 667,163 to 668,482
_01771
H281DRAFT_01772: H281DRAFT_01772 - Predicted periplasmic or secreted lipoprotein, at 668,526 to 668,885
_01772
H281DRAFT_01773: H281DRAFT_01773 - PAS domain S-box-containing protein, at 669,079 to 675,045
_01773
H281DRAFT_01774: H281DRAFT_01774 - Enoyl-CoA hydratase/carnithine racemase, at 675,182 to 676,021
_01774
Position (kb)
669
670
671
672
673
674
675
676 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 668.177 kb on - strand, within H281DRAFT_01771 at 668.378 kb on - strand at 668.928 kb on + strand at 668.929 kb on - strand at 668.951 kb on - strand at 668.951 kb on - strand at 670.147 kb on + strand, within H281DRAFT_01773 at 670.148 kb on - strand, within H281DRAFT_01773 at 670.148 kb on - strand, within H281DRAFT_01773 at 670.148 kb on - strand, within H281DRAFT_01773 at 670.148 kb on - strand, within H281DRAFT_01773 at 670.542 kb on - strand, within H281DRAFT_01773 at 671.098 kb on - strand, within H281DRAFT_01773 at 671.230 kb on - strand, within H281DRAFT_01773 at 671.304 kb on - strand, within H281DRAFT_01773 at 671.304 kb on - strand, within H281DRAFT_01773 at 671.307 kb on + strand, within H281DRAFT_01773 at 671.421 kb on - strand, within H281DRAFT_01773 at 672.490 kb on - strand, within H281DRAFT_01773 at 672.587 kb on + strand, within H281DRAFT_01773 at 672.590 kb on - strand, within H281DRAFT_01773 at 673.596 kb on - strand, within H281DRAFT_01773 at 673.747 kb on + strand, within H281DRAFT_01773 at 673.965 kb on - strand, within H281DRAFT_01773 at 674.075 kb on + strand, within H281DRAFT_01773 at 674.466 kb on - strand at 674.962 kb on - strand at 675.106 kb on - strand at 676.009 kb on + strand at 676.040 kb on + strand at 676.042 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 668,177 - H281DRAFT_01771 0.77 +0.9 668,378 - +1.2 668,928 + +0.5 668,929 - +0.8 668,951 - -0.4 668,951 - -0.2 670,147 + H281DRAFT_01773 0.18 +0.1 670,148 - H281DRAFT_01773 0.18 +1.3 670,148 - H281DRAFT_01773 0.18 +0.1 670,148 - H281DRAFT_01773 0.18 +0.3 670,148 - H281DRAFT_01773 0.18 -0.3 670,542 - H281DRAFT_01773 0.25 -1.7 671,098 - H281DRAFT_01773 0.34 +0.3 671,230 - H281DRAFT_01773 0.36 +0.3 671,304 - H281DRAFT_01773 0.37 -0.2 671,304 - H281DRAFT_01773 0.37 -0.4 671,307 + H281DRAFT_01773 0.37 +0.5 671,421 - H281DRAFT_01773 0.39 -1.2 672,490 - H281DRAFT_01773 0.57 -1.0 672,587 + H281DRAFT_01773 0.59 +2.3 672,590 - H281DRAFT_01773 0.59 -0.2 673,596 - H281DRAFT_01773 0.76 -0.6 673,747 + H281DRAFT_01773 0.78 -0.8 673,965 - H281DRAFT_01773 0.82 +0.0 674,075 + H281DRAFT_01773 0.84 -0.1 674,466 - +0.5 674,962 - -1.8 675,106 - -0.2 676,009 + -0.9 676,040 + +0.0 676,042 + -0.4
Or see this region's nucleotide sequence