Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01615 and H281DRAFT_01616 are separated by 180 nucleotides H281DRAFT_01616 and H281DRAFT_01617 are separated by 434 nucleotides H281DRAFT_01617 and H281DRAFT_01618 are separated by 1 nucleotides
H281DRAFT_01615: H281DRAFT_01615 - hypothetical protein, at 495,641 to 497,602
_01615
H281DRAFT_01616: H281DRAFT_01616 - hypothetical protein, at 497,783 to 498,343
_01616
H281DRAFT_01617: H281DRAFT_01617 - hypothetical protein, at 498,778 to 498,990
_01617
H281DRAFT_01618: H281DRAFT_01618 - Outer membrane protein (porin), at 498,992 to 500,143
_01618
Position (kb) 497
498
499 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 496.783 kb on - strand, within H281DRAFT_01615 at 496.853 kb on - strand, within H281DRAFT_01615 at 496.872 kb on + strand, within H281DRAFT_01615 at 496.952 kb on - strand, within H281DRAFT_01615 at 497.043 kb on + strand, within H281DRAFT_01615 at 497.044 kb on - strand, within H281DRAFT_01615 at 497.238 kb on + strand, within H281DRAFT_01615 at 497.239 kb on - strand, within H281DRAFT_01615 at 497.307 kb on + strand, within H281DRAFT_01615 at 497.611 kb on - strand at 497.635 kb on + strand at 497.635 kb on + strand at 497.635 kb on + strand at 497.636 kb on - strand at 497.706 kb on + strand at 497.706 kb on + strand at 497.726 kb on - strand at 497.726 kb on - strand at 497.743 kb on + strand at 497.744 kb on - strand at 497.910 kb on + strand, within H281DRAFT_01616 at 497.984 kb on + strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 498.380 kb on + strand at 498.380 kb on + strand at 498.557 kb on - strand at 498.649 kb on + strand at 498.650 kb on - strand at 498.711 kb on - strand at 498.751 kb on + strand at 498.811 kb on + strand, within H281DRAFT_01617 at 498.893 kb on + strand, within H281DRAFT_01617 at 499.070 kb on + strand at 499.070 kb on + strand at 499.071 kb on - strand at 499.138 kb on + strand, within H281DRAFT_01618 at 499.160 kb on + strand, within H281DRAFT_01618 at 499.310 kb on + strand, within H281DRAFT_01618
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 496,783 - H281DRAFT_01615 0.58 +6.4 496,853 - H281DRAFT_01615 0.62 -0.3 496,872 + H281DRAFT_01615 0.63 +1.1 496,952 - H281DRAFT_01615 0.67 +0.7 497,043 + H281DRAFT_01615 0.71 +0.3 497,044 - H281DRAFT_01615 0.72 +0.9 497,238 + H281DRAFT_01615 0.81 -0.9 497,239 - H281DRAFT_01615 0.81 -0.0 497,307 + H281DRAFT_01615 0.85 +0.2 497,611 - -0.1 497,635 + -0.2 497,635 + -0.1 497,635 + +0.1 497,636 - +3.2 497,706 + -0.1 497,706 + -1.7 497,726 - +0.4 497,726 - +0.0 497,743 + -1.0 497,744 - +0.2 497,910 + H281DRAFT_01616 0.23 +0.2 497,984 + H281DRAFT_01616 0.36 -0.7 497,985 - H281DRAFT_01616 0.36 -0.7 497,985 - H281DRAFT_01616 0.36 +0.8 497,985 - H281DRAFT_01616 0.36 -0.2 498,380 + -0.3 498,380 + +0.9 498,557 - +1.5 498,649 + -0.1 498,650 - -1.0 498,711 - +1.2 498,751 + -0.6 498,811 + H281DRAFT_01617 0.15 -0.0 498,893 + H281DRAFT_01617 0.54 -0.9 499,070 + +0.0 499,070 + -0.3 499,071 - -1.5 499,138 + H281DRAFT_01618 0.13 -0.3 499,160 + H281DRAFT_01618 0.15 -0.4 499,310 + H281DRAFT_01618 0.28 +0.1
Or see this region's nucleotide sequence