Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01411 and H281DRAFT_01412 are separated by 497 nucleotides H281DRAFT_01412 and H281DRAFT_01413 are separated by 43 nucleotides H281DRAFT_01413 and H281DRAFT_01414 are separated by 337 nucleotides
H281DRAFT_01411: H281DRAFT_01411 - hypothetical protein, at 264,917 to 265,420
_01411
H281DRAFT_01412: H281DRAFT_01412 - Superinfection immunity protein, at 265,918 to 266,277
_01412
H281DRAFT_01413: H281DRAFT_01413 - hypothetical protein, at 266,321 to 266,596
_01413
H281DRAFT_01414: H281DRAFT_01414 - hypothetical protein, at 266,934 to 267,182
_01414
Position (kb) 266
267 Strain fitness (log2 ratio) -1
0
1
2 at 265.415 kb on - strand at 265.415 kb on - strand at 265.763 kb on + strand at 265.763 kb on + strand at 266.229 kb on - strand, within H281DRAFT_01412 at 266.304 kb on - strand at 266.322 kb on + strand at 266.555 kb on - strand, within H281DRAFT_01413 at 266.730 kb on + strand at 266.831 kb on + strand at 266.929 kb on + strand at 267.007 kb on - strand, within H281DRAFT_01414 at 267.207 kb on + strand at 267.444 kb on + strand at 267.445 kb on - strand at 267.449 kb on + strand at 267.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 265,415 - -0.3 265,415 - -0.1 265,763 + +0.6 265,763 + +1.8 266,229 - H281DRAFT_01412 0.86 -0.3 266,304 - -0.1 266,322 + -0.6 266,555 - H281DRAFT_01413 0.85 -1.3 266,730 + -0.5 266,831 + -1.5 266,929 + -0.9 267,007 - H281DRAFT_01414 0.29 +0.2 267,207 + -0.4 267,444 + -1.3 267,445 - -0.6 267,449 + +0.6 267,450 - -1.2
Or see this region's nucleotide sequence