Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00796 and H281DRAFT_00797 are separated by 477 nucleotides H281DRAFT_00797 and H281DRAFT_00798 are separated by 134 nucleotides
H281DRAFT_00796: H281DRAFT_00796 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 881,885 to 882,691
_00796
H281DRAFT_00797: H281DRAFT_00797 - D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167), at 883,169 to 884,095
_00797
H281DRAFT_00798: H281DRAFT_00798 - Cell wall-associated hydrolase, NlpC family, at 884,230 to 885,471
_00798
Position (kb) 883
884
885 Strain fitness (log2 ratio) -1
0
1
2 at 882.337 kb on - strand, within H281DRAFT_00796 at 882.337 kb on - strand, within H281DRAFT_00796 at 882.399 kb on + strand, within H281DRAFT_00796 at 882.861 kb on - strand at 882.862 kb on + strand at 883.013 kb on - strand at 883.048 kb on + strand at 883.048 kb on + strand at 883.049 kb on - strand at 883.108 kb on + strand at 883.177 kb on - strand at 883.278 kb on + strand, within H281DRAFT_00797 at 883.639 kb on - strand, within H281DRAFT_00797 at 883.639 kb on - strand, within H281DRAFT_00797 at 883.707 kb on - strand, within H281DRAFT_00797 at 883.925 kb on + strand, within H281DRAFT_00797 at 883.925 kb on + strand, within H281DRAFT_00797 at 884.219 kb on - strand at 884.231 kb on + strand at 884.327 kb on - strand at 884.537 kb on + strand, within H281DRAFT_00798 at 884.897 kb on + strand, within H281DRAFT_00798 at 884.898 kb on - strand, within H281DRAFT_00798 at 884.901 kb on + strand, within H281DRAFT_00798 at 884.901 kb on + strand, within H281DRAFT_00798 at 884.902 kb on - strand, within H281DRAFT_00798 at 885.051 kb on - strand, within H281DRAFT_00798 at 885.051 kb on - strand, within H281DRAFT_00798 at 885.051 kb on - strand, within H281DRAFT_00798
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 882,337 - H281DRAFT_00796 0.56 -0.7 882,337 - H281DRAFT_00796 0.56 -1.6 882,399 + H281DRAFT_00796 0.64 -0.1 882,861 - +0.1 882,862 + +0.0 883,013 - -0.4 883,048 + +0.9 883,048 + -0.0 883,049 - -1.2 883,108 + -0.1 883,177 - -0.6 883,278 + H281DRAFT_00797 0.12 -1.1 883,639 - H281DRAFT_00797 0.51 -0.7 883,639 - H281DRAFT_00797 0.51 -0.1 883,707 - H281DRAFT_00797 0.58 +0.0 883,925 + H281DRAFT_00797 0.82 +1.5 883,925 + H281DRAFT_00797 0.82 +1.9 884,219 - +1.4 884,231 + +0.1 884,327 - +0.2 884,537 + H281DRAFT_00798 0.25 -1.4 884,897 + H281DRAFT_00798 0.54 -0.3 884,898 - H281DRAFT_00798 0.54 -0.4 884,901 + H281DRAFT_00798 0.54 -0.3 884,901 + H281DRAFT_00798 0.54 +0.5 884,902 - H281DRAFT_00798 0.54 +0.5 885,051 - H281DRAFT_00798 0.66 +1.4 885,051 - H281DRAFT_00798 0.66 +1.2 885,051 - H281DRAFT_00798 0.66 +0.4
Or see this region's nucleotide sequence