Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00793 and H281DRAFT_00794 are separated by 148 nucleotides H281DRAFT_00794 and H281DRAFT_00795 overlap by 1 nucleotides H281DRAFT_00795 and H281DRAFT_00796 are separated by 85 nucleotides
H281DRAFT_00793: H281DRAFT_00793 - primary replicative DNA helicase, at 878,629 to 880,014
_00793
H281DRAFT_00794: H281DRAFT_00794 - hypothetical protein, at 880,163 to 880,789
_00794
H281DRAFT_00795: H281DRAFT_00795 - inorganic phosphate transporter, PiT family, at 880,789 to 881,799
_00795
H281DRAFT_00796: H281DRAFT_00796 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 881,885 to 882,691
_00796
Position (kb) 880
881
882 Strain fitness (log2 ratio) -2
-1
0
1
2 at 880.070 kb on + strand at 880.092 kb on - strand at 880.115 kb on + strand at 880.116 kb on - strand at 880.116 kb on - strand at 880.138 kb on + strand at 880.139 kb on - strand at 880.139 kb on - strand at 880.399 kb on + strand, within H281DRAFT_00794 at 880.399 kb on + strand, within H281DRAFT_00794 at 880.400 kb on - strand, within H281DRAFT_00794 at 880.749 kb on + strand at 880.750 kb on - strand at 880.788 kb on - strand at 880.800 kb on - strand at 880.800 kb on - strand at 881.016 kb on - strand, within H281DRAFT_00795 at 881.103 kb on - strand, within H281DRAFT_00795 at 881.278 kb on + strand, within H281DRAFT_00795 at 881.347 kb on + strand, within H281DRAFT_00795 at 881.347 kb on + strand, within H281DRAFT_00795 at 881.394 kb on + strand, within H281DRAFT_00795 at 881.474 kb on - strand, within H281DRAFT_00795 at 881.858 kb on - strand at 881.858 kb on - strand at 881.858 kb on - strand at 881.859 kb on + strand at 881.860 kb on - strand at 881.937 kb on + strand at 881.937 kb on + strand at 881.937 kb on + strand at 881.938 kb on - strand at 882.150 kb on + strand, within H281DRAFT_00796 at 882.153 kb on + strand, within H281DRAFT_00796 at 882.337 kb on - strand, within H281DRAFT_00796 at 882.337 kb on - strand, within H281DRAFT_00796 at 882.399 kb on + strand, within H281DRAFT_00796
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 880,070 + +1.2 880,092 - +0.6 880,115 + -0.4 880,116 - -0.4 880,116 - -0.6 880,138 + -1.6 880,139 - -1.1 880,139 - -1.9 880,399 + H281DRAFT_00794 0.38 -0.8 880,399 + H281DRAFT_00794 0.38 -0.3 880,400 - H281DRAFT_00794 0.38 -0.7 880,749 + -0.4 880,750 - +0.3 880,788 - +0.6 880,800 - -2.3 880,800 - -1.3 881,016 - H281DRAFT_00795 0.22 -2.5 881,103 - H281DRAFT_00795 0.31 -1.8 881,278 + H281DRAFT_00795 0.48 -0.4 881,347 + H281DRAFT_00795 0.55 +0.2 881,347 + H281DRAFT_00795 0.55 +0.4 881,394 + H281DRAFT_00795 0.60 -0.3 881,474 - H281DRAFT_00795 0.68 -0.8 881,858 - -1.8 881,858 - +1.0 881,858 - +1.4 881,859 + -1.4 881,860 - +2.0 881,937 + +0.8 881,937 + -0.6 881,937 + -0.5 881,938 - +0.4 882,150 + H281DRAFT_00796 0.33 +0.3 882,153 + H281DRAFT_00796 0.33 +0.3 882,337 - H281DRAFT_00796 0.56 -0.7 882,337 - H281DRAFT_00796 0.56 -1.6 882,399 + H281DRAFT_00796 0.64 -0.1
Or see this region's nucleotide sequence