Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00684 and H281DRAFT_00685 are separated by 297 nucleotides H281DRAFT_00685 and H281DRAFT_00686 are separated by 112 nucleotides
H281DRAFT_00684: H281DRAFT_00684 - hypothetical protein, at 764,347 to 764,787
_00684
H281DRAFT_00685: H281DRAFT_00685 - hypothetical protein, at 765,085 to 767,313
_00685
H281DRAFT_00686: H281DRAFT_00686 - CHAD domain-containing protein, at 767,426 to 768,259
_00686
Position (kb) 765
766
767
768 Strain fitness (log2 ratio) -1
0
1 at 764.306 kb on + strand at 764.325 kb on + strand at 764.331 kb on + strand at 764.904 kb on + strand at 764.904 kb on + strand at 765.405 kb on + strand, within H281DRAFT_00685 at 765.405 kb on + strand, within H281DRAFT_00685 at 765.406 kb on - strand, within H281DRAFT_00685 at 765.425 kb on - strand, within H281DRAFT_00685 at 765.610 kb on - strand, within H281DRAFT_00685 at 766.000 kb on + strand, within H281DRAFT_00685 at 766.000 kb on + strand, within H281DRAFT_00685 at 766.146 kb on - strand, within H281DRAFT_00685 at 766.277 kb on - strand, within H281DRAFT_00685 at 766.802 kb on - strand, within H281DRAFT_00685 at 767.056 kb on + strand, within H281DRAFT_00685 at 767.057 kb on - strand, within H281DRAFT_00685 at 767.059 kb on - strand, within H281DRAFT_00685 at 767.251 kb on + strand at 767.694 kb on + strand, within H281DRAFT_00686 at 767.695 kb on - strand, within H281DRAFT_00686 at 767.875 kb on + strand, within H281DRAFT_00686 at 767.876 kb on - strand, within H281DRAFT_00686 at 768.085 kb on + strand, within H281DRAFT_00686 at 768.290 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 764,306 + -0.4 764,325 + -0.3 764,331 + +0.1 764,904 + -0.2 764,904 + -0.7 765,405 + H281DRAFT_00685 0.14 -0.9 765,405 + H281DRAFT_00685 0.14 -0.8 765,406 - H281DRAFT_00685 0.14 -1.0 765,425 - H281DRAFT_00685 0.15 -0.1 765,610 - H281DRAFT_00685 0.24 -0.8 766,000 + H281DRAFT_00685 0.41 -0.0 766,000 + H281DRAFT_00685 0.41 +0.3 766,146 - H281DRAFT_00685 0.48 +0.2 766,277 - H281DRAFT_00685 0.53 +0.9 766,802 - H281DRAFT_00685 0.77 +0.1 767,056 + H281DRAFT_00685 0.88 -0.0 767,057 - H281DRAFT_00685 0.88 -0.1 767,059 - H281DRAFT_00685 0.89 -0.1 767,251 + -0.2 767,694 + H281DRAFT_00686 0.32 -0.5 767,695 - H281DRAFT_00686 0.32 -1.1 767,875 + H281DRAFT_00686 0.54 -1.0 767,876 - H281DRAFT_00686 0.54 -0.7 768,085 + H281DRAFT_00686 0.79 +0.6 768,290 + -0.1
Or see this region's nucleotide sequence