Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00593 and H281DRAFT_00594 are separated by 135 nucleotides H281DRAFT_00594 and H281DRAFT_00595 are separated by 24 nucleotides H281DRAFT_00595 and H281DRAFT_00596 are separated by 343 nucleotides
H281DRAFT_00593: H281DRAFT_00593 - ATP-binding cassette, subfamily F, member 3, at 660,793 to 662,742
_00593
H281DRAFT_00594: H281DRAFT_00594 - glutathione peroxidase, at 662,878 to 663,357
_00594
H281DRAFT_00595: H281DRAFT_00595 - cardiolipin synthase, at 663,382 to 664,848
_00595
H281DRAFT_00596: H281DRAFT_00596 - [LSU ribosomal protein L3P]-glutamine N5-methyltransferase, at 665,192 to 666,076
_00596
Position (kb) 663
664
665 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 662.493 kb on + strand, within H281DRAFT_00593 at 662.493 kb on + strand, within H281DRAFT_00593 at 662.493 kb on + strand, within H281DRAFT_00593 at 662.496 kb on - strand, within H281DRAFT_00593 at 662.769 kb on - strand at 662.774 kb on - strand at 662.891 kb on - strand at 662.912 kb on + strand at 662.942 kb on - strand, within H281DRAFT_00594 at 662.971 kb on - strand, within H281DRAFT_00594 at 663.001 kb on + strand, within H281DRAFT_00594 at 663.023 kb on - strand, within H281DRAFT_00594 at 663.023 kb on - strand, within H281DRAFT_00594 at 663.023 kb on - strand, within H281DRAFT_00594 at 663.031 kb on + strand, within H281DRAFT_00594 at 663.031 kb on + strand, within H281DRAFT_00594 at 663.134 kb on - strand, within H281DRAFT_00594 at 663.202 kb on + strand, within H281DRAFT_00594 at 663.430 kb on + strand at 663.463 kb on + strand at 663.692 kb on + strand, within H281DRAFT_00595 at 664.016 kb on + strand, within H281DRAFT_00595 at 664.119 kb on - strand, within H281DRAFT_00595 at 664.277 kb on + strand, within H281DRAFT_00595 at 664.322 kb on + strand, within H281DRAFT_00595 at 664.655 kb on + strand, within H281DRAFT_00595 at 664.689 kb on - strand, within H281DRAFT_00595 at 664.689 kb on - strand, within H281DRAFT_00595 at 664.707 kb on - strand at 664.798 kb on + strand at 664.905 kb on + strand at 664.905 kb on + strand at 664.905 kb on + strand at 664.906 kb on - strand at 664.906 kb on - strand at 664.918 kb on + strand at 664.919 kb on - strand at 664.934 kb on + strand at 664.957 kb on + strand at 665.425 kb on + strand, within H281DRAFT_00596 at 665.426 kb on - strand, within H281DRAFT_00596 at 665.426 kb on - strand, within H281DRAFT_00596 at 665.426 kb on - strand at 665.426 kb on - strand, within H281DRAFT_00596 at 665.427 kb on + strand, within H281DRAFT_00596 at 665.427 kb on + strand, within H281DRAFT_00596 at 665.428 kb on - strand, within H281DRAFT_00596 at 665.493 kb on + strand, within H281DRAFT_00596 at 665.517 kb on + strand, within H281DRAFT_00596 at 665.517 kb on + strand, within H281DRAFT_00596 at 665.518 kb on - strand, within H281DRAFT_00596 at 665.560 kb on - strand, within H281DRAFT_00596 at 665.718 kb on + strand, within H281DRAFT_00596 at 665.787 kb on + strand, within H281DRAFT_00596 at 665.826 kb on + strand, within H281DRAFT_00596 at 665.826 kb on + strand, within H281DRAFT_00596 at 665.827 kb on - strand, within H281DRAFT_00596
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 662,493 + H281DRAFT_00593 0.87 -0.0 662,493 + H281DRAFT_00593 0.87 -1.0 662,493 + H281DRAFT_00593 0.87 -2.2 662,496 - H281DRAFT_00593 0.87 -0.5 662,769 - -0.6 662,774 - -0.3 662,891 - +0.7 662,912 + +0.4 662,942 - H281DRAFT_00594 0.13 -0.3 662,971 - H281DRAFT_00594 0.19 -0.6 663,001 + H281DRAFT_00594 0.26 -0.6 663,023 - H281DRAFT_00594 0.30 -0.6 663,023 - H281DRAFT_00594 0.30 -0.8 663,023 - H281DRAFT_00594 0.30 +0.4 663,031 + H281DRAFT_00594 0.32 -0.2 663,031 + H281DRAFT_00594 0.32 +0.3 663,134 - H281DRAFT_00594 0.53 +0.9 663,202 + H281DRAFT_00594 0.68 +0.1 663,430 + -0.6 663,463 + -0.6 663,692 + H281DRAFT_00595 0.21 +0.5 664,016 + H281DRAFT_00595 0.43 -1.0 664,119 - H281DRAFT_00595 0.50 -1.3 664,277 + H281DRAFT_00595 0.61 +0.1 664,322 + H281DRAFT_00595 0.64 -0.4 664,655 + H281DRAFT_00595 0.87 -1.6 664,689 - H281DRAFT_00595 0.89 +0.5 664,689 - H281DRAFT_00595 0.89 +0.4 664,707 - -0.4 664,798 + +0.7 664,905 + +2.9 664,905 + -1.3 664,905 + +0.1 664,906 - -0.4 664,906 - -0.0 664,918 + -0.6 664,919 - +1.9 664,934 + +1.9 664,957 + -0.3 665,425 + H281DRAFT_00596 0.26 +0.7 665,426 - H281DRAFT_00596 0.26 -0.3 665,426 - H281DRAFT_00596 0.26 +0.4 665,426 - +0.4 665,426 - H281DRAFT_00596 0.26 +0.2 665,427 + H281DRAFT_00596 0.27 +0.3 665,427 + H281DRAFT_00596 0.27 -0.5 665,428 - H281DRAFT_00596 0.27 -1.9 665,493 + H281DRAFT_00596 0.34 -0.9 665,517 + H281DRAFT_00596 0.37 -0.1 665,517 + H281DRAFT_00596 0.37 +0.4 665,518 - H281DRAFT_00596 0.37 +1.1 665,560 - H281DRAFT_00596 0.42 +0.6 665,718 + H281DRAFT_00596 0.59 -0.4 665,787 + H281DRAFT_00596 0.67 -0.1 665,826 + H281DRAFT_00596 0.72 -0.2 665,826 + H281DRAFT_00596 0.72 -0.0 665,827 - H281DRAFT_00596 0.72 +0.3
Or see this region's nucleotide sequence