Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00066 and H281DRAFT_00067 are separated by 426 nucleotides H281DRAFT_00067 and H281DRAFT_00068 are separated by 9 nucleotides H281DRAFT_00068 and H281DRAFT_00069 are separated by 424 nucleotides
H281DRAFT_00066: H281DRAFT_00066 - hypothetical protein, at 66,436 to 67,059
_00066
H281DRAFT_00067: H281DRAFT_00067 - transposase, IS4 family, at 67,486 to 68,394
_00067
H281DRAFT_00068: H281DRAFT_00068 - Transposase, at 68,404 to 68,931
_00068
H281DRAFT_00069: H281DRAFT_00069 - hypothetical protein, at 69,356 to 70,066
_00069
Position (kb) 67
68
69 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 66.867 kb on + strand, within H281DRAFT_00066 at 66.985 kb on + strand, within H281DRAFT_00066 at 67.058 kb on - strand at 67.206 kb on + strand at 67.257 kb on + strand at 67.257 kb on + strand at 67.376 kb on - strand at 67.376 kb on - strand at 67.377 kb on + strand at 67.443 kb on - strand at 67.464 kb on + strand at 67.492 kb on - strand at 67.559 kb on + strand at 67.729 kb on + strand, within H281DRAFT_00067 at 67.990 kb on - strand, within H281DRAFT_00067 at 68.027 kb on + strand, within H281DRAFT_00067 at 68.028 kb on - strand, within H281DRAFT_00067 at 68.187 kb on - strand, within H281DRAFT_00067 at 68.287 kb on - strand, within H281DRAFT_00067 at 68.406 kb on - strand at 68.720 kb on + strand, within H281DRAFT_00068 at 68.721 kb on - strand, within H281DRAFT_00068 at 68.721 kb on - strand, within H281DRAFT_00068 at 68.726 kb on + strand, within H281DRAFT_00068 at 68.726 kb on + strand, within H281DRAFT_00068 at 68.727 kb on - strand, within H281DRAFT_00068 at 68.728 kb on + strand, within H281DRAFT_00068 at 68.893 kb on + strand at 68.964 kb on + strand at 69.218 kb on + strand at 69.250 kb on + strand at 69.251 kb on - strand at 69.266 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 66,867 + H281DRAFT_00066 0.69 -0.8 66,985 + H281DRAFT_00066 0.88 -0.3 67,058 - +0.0 67,206 + -0.3 67,257 + +0.6 67,257 + -0.2 67,376 - +0.4 67,376 - +0.1 67,377 + -0.2 67,443 - -1.2 67,464 + -2.4 67,492 - -0.2 67,559 + +0.5 67,729 + H281DRAFT_00067 0.27 -0.8 67,990 - H281DRAFT_00067 0.55 -0.7 68,027 + H281DRAFT_00067 0.60 -0.3 68,028 - H281DRAFT_00067 0.60 +2.3 68,187 - H281DRAFT_00067 0.77 +0.9 68,287 - H281DRAFT_00067 0.88 -0.1 68,406 - -0.6 68,720 + H281DRAFT_00068 0.60 -1.4 68,721 - H281DRAFT_00068 0.60 +0.7 68,721 - H281DRAFT_00068 0.60 +0.2 68,726 + H281DRAFT_00068 0.61 +0.3 68,726 + H281DRAFT_00068 0.61 +2.8 68,727 - H281DRAFT_00068 0.61 -2.8 68,728 + H281DRAFT_00068 0.61 +0.2 68,893 + +0.6 68,964 + +0.8 69,218 + -0.8 69,250 + -0.1 69,251 - -0.3 69,266 + +0.3
Or see this region's nucleotide sequence